SNP Links for Gene (Select 4103) - SNP

Links from Gene

Items: 1 to 20 of 3229

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Select item 14908830991.

rs1490883099 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:151922447 (GRCh38)
X:151090919 (GRCh37)
Canonical SPDI:: NC_000023.11:151922446:C:T
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000019/2 (GnomAD)
T=0.000026/7 (TOPMED)
HGVS:: NC_000023.11:g.151922447C>T, NC_000023.10:g.151090919C>T, NG_013245.1:g.14559C>T

Select item 14907862442.

rs1490786244 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:151913770 (GRCh38)
X:151082242 (GRCh37)
Canonical SPDI:: NC_000023.11:151913769:G:A
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00001/1 (GnomAD)
A=0.000094/25 (TOPMED)
HGVS:: NC_000023.11:g.151913770G>A, NC_000023.10:g.151082242G>A, NG_013245.1:g.5882G>A

Select item 14907025583.

rs1490702558 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: X:151915386 (GRCh38)
X:151083858 (GRCh37)
Canonical SPDI:: NC_000023.11:151915385:A:C
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: A=0./0 (SGDP_PRJ)
C=0.278/45 (KOREAN)
HGVS:: NC_000023.11:g.151915386A>C, NC_000023.10:g.151083858A>C, NG_013245.1:g.7498A>C

Select item 14906748174.

rs1490674817 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:151916090 (GRCh38)
X:151084562 (GRCh37)
Canonical SPDI:: NC_000023.11:151916089:C:G
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000023.11:g.151916090C>G, NC_000023.10:g.151084562C>G, NG_013245.1:g.8202C>G

Select item 14906719665.

rs1490671966 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:151918307 (GRCh38)
X:151086779 (GRCh37)
Canonical SPDI:: NC_000023.11:151918306:C:T
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000023.11:g.151918307C>T, NC_000023.10:g.151086779C>T, NG_013245.1:g.10419C>T, NM_001386203.1:c.-428C>T, NM_001011550.1:c.-187C>T

Select item 14900647456.

rs1490064745 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:151922929 (GRCh38)
X:151091401 (GRCh37)
Canonical SPDI:: NC_000023.11:151922928:C:T
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
HGVS:: NC_000023.11:g.151922929C>T, NC_000023.10:g.151091401C>T, NG_013245.1:g.15041C>T

Select item 14898799127.

rs1489879912 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: X:151917814 (GRCh38)
X:151086286 (GRCh37)
Canonical SPDI:: NC_000023.11:151917813:C:G,NC_000023.11:151917813:C:T
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
HGVS:: NC_000023.11:g.151917814C>G, NC_000023.11:g.151917814C>T, NC_000023.10:g.151086286C>G, NC_000023.10:g.151086286C>T, NG_013245.1:g.9926C>G, NG_013245.1:g.9926C>T

Select item 14898561248.

rs1489856124 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:151917664 (GRCh38)
X:151086136 (GRCh37)
Canonical SPDI:: NC_000023.11:151917663:G:C
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.151917664G>C, NC_000023.10:g.151086136G>C, NG_013245.1:g.9776G>C

Select item 14898004019.

rs1489800401 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:151915532 (GRCh38)
X:151084004 (GRCh37)
Canonical SPDI:: NC_000023.11:151915531:G:C
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000023.11:g.151915532G>C, NC_000023.10:g.151084004G>C, NG_013245.1:g.7644G>C, NM_001386198.1:c.-373G>C

Select item 148956298210.

rs1489562982 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:151919610 (GRCh38)
X:151088082 (GRCh37)
Canonical SPDI:: NC_000023.11:151919609:A:G
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.00006/1 (ALFA)
G=0.00001/1 (GnomAD)
G=0.00009/2 (TOMMO)
HGVS:: NC_000023.11:g.151919610A>G, NC_000023.10:g.151088082A>G, NG_013245.1:g.11722A>G, NM_001386198.1:c.-250A>G

Select item 148920952011.

rs1489209520 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: X:151923556 (GRCh38)
X:151092028 (GRCh37)
Canonical SPDI:: NC_000023.11:151923555:T:C,NC_000023.11:151923555:T:G
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000006/1 (GnomAD_exomes)
G=0.000008/2 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.151923556T>C, NC_000023.11:g.151923556T>G, NC_000023.10:g.151092028T>C, NC_000023.10:g.151092028T>G, NG_013245.1:g.15668T>C, NG_013245.1:g.15668T>G

Select item 148900594912.

rs1489005949 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: X:151919644 (GRCh38)
X:151088116 (GRCh37)
Canonical SPDI:: NC_000023.11:151919643:G:T
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
HGVS:: NC_000023.11:g.151919644G>T, NC_000023.10:g.151088116G>T, NG_013245.1:g.11756G>T, NM_001386198.1:c.-216G>T

Select item 148886556213.

rs1488865562 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:151917933 (GRCh38)
X:151086405 (GRCh37)
Canonical SPDI:: NC_000023.11:151917932:C:T
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000023.11:g.151917933C>T, NC_000023.10:g.151086405C>T, NG_013245.1:g.10045C>T

Select item 148881414314.

rs1488814143 [Homo sapiens]

Variant type:: DELINS
Alleles:: AG>- [Show Flanks]
Chromosome:: X:151918519 (GRCh38)
X:151086991 (GRCh37)
Canonical SPDI:: NC_000023.11:151918516:AGAG:AG
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: AGAG=0./0 (ALFA)
-=0.00005/2 (GnomAD)
HGVS:: NC_000023.11:g.151918517AG[1], NC_000023.10:g.151086989AG[1], NG_013245.1:g.10629AG[1]

Select item 148856787615.

rs1488567876 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: X:151913434 (GRCh38)
X:151081906 (GRCh37)
Canonical SPDI:: NC_000023.11:151913433:G:A,NC_000023.11:151913433:G:T
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000011/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.151913434G>A, NC_000023.11:g.151913434G>T, NC_000023.10:g.151081906G>A, NC_000023.10:g.151081906G>T, NG_013245.1:g.5546G>A, NG_013245.1:g.5546G>T

Select item 148828910216.

rs1488289102 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:151914132 (GRCh38)
X:151082604 (GRCh37)
Canonical SPDI:: NC_000023.11:151914131:C:T
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000023.11:g.151914132C>T, NC_000023.10:g.151082604C>T, NG_013245.1:g.6244C>T

Select item 148773244017.

rs1487732440 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:151919279 (GRCh38)
X:151087751 (GRCh37)
Canonical SPDI:: NC_000023.11:151919278:T:C
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00017/2 (ALFA)
C=0.00014/2 (TOMMO)
HGVS:: NC_000023.11:g.151919279T>C, NC_000023.10:g.151087751T>C, NG_013245.1:g.11391T>C

Select item 148754901018.

rs1487549010 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:151922049 (GRCh38)
X:151090521 (GRCh37)
Canonical SPDI:: NC_000023.11:151922048:C:G
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00001/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.151922049C>G, NC_000023.10:g.151090521C>G, NG_013245.1:g.14161C>G

Select item 148740476419.

rs1487404764 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: X:151919097 (GRCh38)
X:151087569 (GRCh37)
Canonical SPDI:: NC_000023.11:151919096:C:A,NC_000023.11:151919096:C:T
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.151919097C>A, NC_000023.11:g.151919097C>T, NC_000023.10:g.151087569C>A, NC_000023.10:g.151087569C>T, NG_013245.1:g.11209C>A, NG_013245.1:g.11209C>T

Select item 148737460920.

rs1487374609 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>-,CC [Show Flanks]
Chromosome:: X:151920652 (GRCh38)
X:151089124 (GRCh37)
Canonical SPDI:: NC_000023.11:151920651:CCCCCC:CCCCC,NC_000023.11:151920651:CCCCCC:CCCCCCC
Gene:: MAGEA4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCCC=0.000061/1 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.151920657del, NC_000023.11:g.151920657dup, NC_000023.10:g.151089129del, NC_000023.10:g.151089129dup, NG_013245.1:g.12769del, NG_013245.1:g.12769dup

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