SNP Links for Gene (Select 4170) - SNP

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Items: 1 to 20 of 1000

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Select item 14913024511.

rs1491302451 [Homo sapiens]

Variant type:: DELINS
Alleles:: CA>- [Show Flanks]
Chromosome:: 1:150577545 (GRCh38)
1:150550021 (GRCh37)
Canonical SPDI:: NC_000001.11:150577543:ACA:A
Gene:: MCL1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000084/1 (ALFA)
-=0.000052/6 (ExAC)
-=0.000062/13 (GnomAD_exomes)
-=0.000086/12 (GnomAD)
-=0.045847/170 (TWINSUK)
-=0.048262/186 (ALSPAC)
HGVS:: NC_000001.11:g.150577545_150577546del, NC_000001.10:g.150550021_150550022del, NG_029146.1:g.7194_7195del

Select item 14908678902.

rs1490867890 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:150579475 (GRCh38)
1:150551951 (GRCh37)
Canonical SPDI:: NC_000001.11:150579474:G:A,NC_000001.11:150579474:G:C
Gene:: MCL1 (Varview), LOC107985203 (Varview)
Functional Consequence:: missense_variant,2KB_upstream_variant,upstream_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
A=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.150579475G>A, NC_000001.11:g.150579475G>C, NC_000001.10:g.150551951G>A, NC_000001.10:g.150551951G>C, NG_029146.1:g.5264C>T, NG_029146.1:g.5264C>G, NM_021960.5:c.56C>T, NM_021960.5:c.56C>G, NM_021960.4:c.56C>T, NM_021960.4:c.56C>G, NM_182763.3:c.56C>T, NM_182763.3:c.56C>G, NM_182763.2:c.56C>T, NM_182763.2:c.56C>G, NM_001197320.2:c.56C>T, NM_001197320.2:c.56C>G, NM_001197320.1:c.56C>T, NM_001197320.1:c.56C>G, NG_060197.1:g.63G>A, NG_060197.1:g.63G>C, NP_068779.1:p.Ala19Val, NP_068779.1:p.Ala19Gly, NP_877495.1:p.Ala19Val, NP_877495.1:p.Ala19Gly, NP_001184249.1:p.Ala19Val, NP_001184249.1:p.Ala19Gly

Select item 14906663373.

rs1490666337 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 1:150574769 (GRCh38)
1:150547246 (GRCh37)
Canonical SPDI:: NC_000001.11:150574769:T:TT
Gene:: MCL1 (Varview), ADAMTSL4-AS1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.150574770dup, NC_000001.10:g.150547246dup, NG_029146.1:g.9973dup, NM_021960.5:c.*2605dup, NM_021960.4:c.*2609dup, NM_182763.3:c.*2594dup, NM_182763.2:c.*2598dup, NM_001197320.2:c.*2605dup, NM_001197320.1:c.*2609dup

Select item 14906099904.

rs1490609990 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:150578340 (GRCh38)
1:150550816 (GRCh37)
Canonical SPDI:: NC_000001.11:150578339:G:T
Gene:: MCL1 (Varview), LOC107985203 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,coding_sequence_variant,synonymous_variant,2KB_upstream_variant
Validated:: by frequency,by cluster
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.150578340G>T, NC_000001.10:g.150550816G>T, NG_029146.1:g.6399C>A, NM_021960.5:c.840C>A, NM_021960.4:c.840C>A, NM_001197320.2:c.381C>A, NM_001197320.1:c.381C>A, NG_082181.1:g.573G>T

Select item 14903070485.

rs1490307048 [Homo sapiens]

Variant type:: DELINS
Alleles:: CA>- [Show Flanks]
Chromosome:: 1:150575752 (GRCh38)
1:150548228 (GRCh37)
Canonical SPDI:: NC_000001.11:150575749:CACA:CA
Gene:: MCL1 (Varview), ADAMTSL4-AS1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CACA=0./0 (ALFA)
-=0.00016/1 (1000Genomes)
HGVS:: NC_000001.11:g.150575750CA[1], NC_000001.10:g.150548226CA[1], NG_029146.1:g.8990TG[1], NM_021960.5:c.*1622TG[1], NM_021960.4:c.*1626TG[1], NM_182763.3:c.*1611TG[1], NM_182763.2:c.*1615TG[1], NM_001197320.2:c.*1622TG[1], NM_001197320.1:c.*1626TG[1]

Select item 14902741036.

rs1490274103 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:150579148 (GRCh38)
1:150551624 (GRCh37)
Canonical SPDI:: NC_000001.11:150579147:C:T
Gene:: MCL1 (Varview), LOC107985203 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,coding_sequence_variant,2KB_upstream_variant,missense_variant
Validated:: by frequency,by cluster
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.150579148C>T, NC_000001.10:g.150551624C>T, NG_029146.1:g.5591G>A, NM_021960.5:c.383G>A, NM_021960.4:c.383G>A, NM_182763.3:c.383G>A, NM_182763.2:c.383G>A, NG_082181.1:g.1381C>T, NP_068779.1:p.Gly128Glu, NP_877495.1:p.Gly128Glu

Select item 14898226297.

rs1489822629 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:150574377 (GRCh38)
1:150546853 (GRCh37)
Canonical SPDI:: NC_000001.11:150574376:A:C
Gene:: MCL1 (Varview), ADAMTSL4-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.150574377A>C, NC_000001.10:g.150546853A>C, NG_029146.1:g.10366T>G, NR_104133.1:n.176T>G

Select item 14897888508.

rs1489788850 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:150576511 (GRCh38)
1:150548987 (GRCh37)
Canonical SPDI:: NC_000001.11:150576510:C:T
Gene:: MCL1 (Varview), ADAMTSL4-AS1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.000035/1 (TOMMO)
T=0.000156/1 (1000Genomes)
HGVS:: NC_000001.11:g.150576511C>T, NC_000001.10:g.150548987C>T, NG_029146.1:g.8228G>A, NM_021960.5:c.*864G>A, NM_021960.4:c.*864G>A, NM_182763.3:c.*853G>A, NM_182763.2:c.*853G>A, NM_001197320.2:c.*864G>A, NM_001197320.1:c.*864G>A

Select item 14895737209.

rs1489573720 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:150575572 (GRCh38)
1:150548048 (GRCh37)
Canonical SPDI:: NC_000001.11:150575571:C:T
Gene:: MCL1 (Varview), ADAMTSL4-AS1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.150575572C>T, NC_000001.10:g.150548048C>T, NG_029146.1:g.9171G>A, NM_021960.5:c.*1803G>A, NM_021960.4:c.*1807G>A, NM_182763.3:c.*1792G>A, NM_182763.2:c.*1796G>A, NM_001197320.2:c.*1803G>A, NM_001197320.1:c.*1807G>A

Select item 148952276510.

rs1489522765 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:150574722 (GRCh38)
1:150547198 (GRCh37)
Canonical SPDI:: NC_000001.11:150574721:A:G
Gene:: MCL1 (Varview), ADAMTSL4-AS1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.150574722A>G, NC_000001.10:g.150547198A>G, NG_029146.1:g.10021T>C, NM_021960.5:c.*2653T>C, NM_021960.4:c.*2657T>C, NM_182763.3:c.*2642T>C, NM_182763.2:c.*2646T>C, NM_001197320.2:c.*2653T>C, NM_001197320.1:c.*2657T>C

Select item 148885096011.

rs1488850960 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:150581154 (GRCh38)
1:150553630 (GRCh37)
Canonical SPDI:: NC_000001.11:150581153:C:A
Gene:: MCL1 (Varview), LOC107985203 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000142/2 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.150581154C>A, NC_000001.10:g.150553630C>A, NG_029146.1:g.3585G>T

Select item 148883623412.

rs1488836234 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAGGTCTGTG>- [Show Flanks]
Chromosome:: 1:150575692 (GRCh38)
1:150548168 (GRCh37)
Canonical SPDI:: NC_000001.11:150575689:TGAAAGGTCTGTG:TG
Gene:: MCL1 (Varview), ADAMTSL4-AS1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: TG=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.150575692_150575702del, NC_000001.10:g.150548168_150548178del, NG_029146.1:g.9043_9053del, NM_021960.5:c.*1675_*1685del, NM_021960.4:c.*1679_*1689del, NM_182763.3:c.*1664_*1674del, NM_182763.2:c.*1668_*1678del, NM_001197320.2:c.*1675_*1685del, NM_001197320.1:c.*1679_*1689del

Select item 148870355013.

rs1488703550 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 1:150580735 (GRCh38)
1:150553212 (GRCh37)
Canonical SPDI:: NC_000001.11:150580735:A:AA
Gene:: MCL1 (Varview), LOC107985203 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: AA=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.150580736dup, NC_000001.10:g.150553212dup, NG_029146.1:g.4003dup

Select item 148849024714.

rs1488490247 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:150579840 (GRCh38)
1:150552316 (GRCh37)
Canonical SPDI:: NC_000001.11:150579839:G:A
Gene:: MCL1 (Varview), LOC107985203 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000026/7 (TOPMED)
HGVS:: NC_000001.11:g.150579840G>A, NC_000001.10:g.150552316G>A, NG_029146.1:g.4899C>T, NG_060197.1:g.428G>A, XR_001738230.3:n.11G>A, XR_001738230.2:n.25G>A, XR_001738230.1:n.40G>A

Select item 148843530315.

rs1488435303 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:150580994 (GRCh38)
1:150553470 (GRCh37)
Canonical SPDI:: NC_000001.11:150580993:T:G
Gene:: MCL1 (Varview), LOC107985203 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.150580994T>G, NC_000001.10:g.150553470T>G, NG_029146.1:g.3745A>C

Select item 148825826116.

rs1488258261 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 1:150577692 (GRCh38)
1:150550168 (GRCh37)
Canonical SPDI:: NC_000001.11:150577691:A:G,NC_000001.11:150577691:A:T
Gene:: MCL1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.150577692A>G, NC_000001.11:g.150577692A>T, NC_000001.10:g.150550168A>G, NC_000001.10:g.150550168A>T, NG_029146.1:g.7047T>C, NG_029146.1:g.7047T>A

Select item 148820737417.

rs1488207374 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:150579606 (GRCh38)
1:150552082 (GRCh37)
Canonical SPDI:: NC_000001.11:150579605:G:A,NC_000001.11:150579605:G:C
Gene:: MCL1 (Varview), LOC107985203 (Varview)
Functional Consequence:: upstream_transcript_variant,5_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.150579606G>A, NC_000001.11:g.150579606G>C, NC_000001.10:g.150552082G>A, NC_000001.10:g.150552082G>C, NG_029146.1:g.5133C>T, NG_029146.1:g.5133C>G, NM_021960.5:c.-76C>T, NM_021960.5:c.-76C>G, NM_021960.4:c.-76C>T, NM_021960.4:c.-76C>G, NM_182763.3:c.-76C>T, NM_182763.3:c.-76C>G, NM_182763.2:c.-76C>T, NM_182763.2:c.-76C>G, NM_001197320.2:c.-76C>T, NM_001197320.2:c.-76C>G, NM_001197320.1:c.-76C>T, NM_001197320.1:c.-76C>G, NG_060197.1:g.194G>A, NG_060197.1:g.194G>C

Select item 148773185418.

rs1487731854 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:150580015 (GRCh38)
1:150552491 (GRCh37)
Canonical SPDI:: NC_000001.11:150580014:A:C
Gene:: MCL1 (Varview), LOC107985203 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000021/3 (GnomAD)
C=0.000023/6 (TOPMED)
HGVS:: NC_000001.11:g.150580015A>C, NC_000001.10:g.150552491A>C, NG_029146.1:g.4724T>G, XR_001738230.3:n.186A>C, XR_001738230.2:n.200A>C, XR_001738230.1:n.215A>C

Select item 148756334019.

rs1487563340 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 1:150579859 (GRCh38)
1:150552335 (GRCh37)
Canonical SPDI:: NC_000001.11:150579858:G:A,NC_000001.11:150579858:G:C,NC_000001.11:150579858:G:T
Gene:: MCL1 (Varview), LOC107985203 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000029/4 (GnomAD)
HGVS:: NC_000001.11:g.150579859G>A, NC_000001.11:g.150579859G>C, NC_000001.11:g.150579859G>T, NC_000001.10:g.150552335G>A, NC_000001.10:g.150552335G>C, NC_000001.10:g.150552335G>T, NG_029146.1:g.4880C>T, NG_029146.1:g.4880C>G, NG_029146.1:g.4880C>A, NG_060197.1:g.447G>A, NG_060197.1:g.447G>C, NG_060197.1:g.447G>T, XR_001738230.3:n.30G>A, XR_001738230.3:n.30G>C, XR_001738230.3:n.30G>T, XR_001738230.2:n.44G>A, XR_001738230.2:n.44G>C, XR_001738230.2:n.44G>T, XR_001738230.1:n.59G>A, XR_001738230.1:n.59G>C, XR_001738230.1:n.59G>T

Select item 148736988120.

rs1487369881 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:150577093 (GRCh38)
1:150549569 (GRCh37)
Canonical SPDI:: NC_000001.11:150577092:A:G
Gene:: MCL1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.150577093A>G, NC_000001.10:g.150549569A>G, NG_029146.1:g.7646T>C, NM_021960.5:c.*282T>C, NM_021960.4:c.*282T>C, NM_182763.3:c.*271T>C, NM_182763.2:c.*271T>C, NM_001197320.2:c.*282T>C, NM_001197320.1:c.*282T>C

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