SNP Links for Gene (Select 4602) - SNP

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Select item 14909316131.

rs1490931613 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 6:135206834 (GRCh38)
6:135527972 (GRCh37)
Canonical SPDI:: NC_000006.12:135206833:A:C
Gene:: MYB (Varview), LOC105378011 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.135206834A>C, NC_000006.11:g.135527972A>C, NG_012330.1:g.30520A>C

Select item 14906831802.

rs1490683180 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:135191901 (GRCh38)
6:135513039 (GRCh37)
Canonical SPDI:: NC_000006.12:135191900:C:T
Gene:: MYB (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.135191901C>T, NC_000006.11:g.135513039C>T, NG_012330.1:g.15587C>T, NG_078205.1:g.211C>T

Select item 14906710953.

rs1490671095 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:135198957 (GRCh38)
6:135520095 (GRCh37)
Canonical SPDI:: NC_000006.12:135198956:C:T
Gene:: MYB (Varview), LOC105378011 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000006.12:g.135198957C>T, NC_000006.11:g.135520095C>T, NG_012330.1:g.22643C>T, NM_005375.4:c.1253C>T, NM_005375.3:c.1253C>T, NM_005375.2:c.1253C>T, NM_001130173.2:c.1616C>T, NM_001130173.1:c.1616C>T, NM_001161656.2:c.1607C>T, NM_001161656.1:c.1607C>T, NM_001161658.2:c.1568C>T, NM_001161658.1:c.1568C>T, NR_134961.2:n.1642C>T, NR_134961.1:n.1635C>T, NR_134965.2:n.1581C>T, NR_134965.1:n.1574C>T, NR_134963.2:n.1459C>T, NR_134963.1:n.1452C>T, NR_134958.2:n.1581C>T, NR_134958.1:n.1574C>T, NR_134959.2:n.1572C>T, NR_134959.1:n.1565C>T, NR_134960.2:n.1459C>T, NR_134960.1:n.1452C>T, NR_134964.2:n.1450C>T, NR_134964.1:n.1443C>T, NM_001130172.2:c.1244C>T, NM_001130172.1:c.1244C>T, NR_134962.2:n.1360C>T, NR_134962.1:n.1353C>T, NM_001161660.2:c.1148C>T, NM_001161660.1:c.1148C>T, NM_001161659.2:c.1253C>T, NM_001161659.1:c.1253C>T, NM_001161657.2:c.998C>T, NM_001161657.1:c.998C>T, XR_942444.3:n.1822C>T, XR_942444.2:n.1774C>T, XR_942444.1:n.2149C>T, XM_047418834.1:c.1556C>T, NP_005366.2:p.Ser418Phe, NP_001123645.1:p.Ser539Phe, NP_001155128.1:p.Ser536Phe, NP_001155130.1:p.Ser523Phe, NP_001123644.1:p.Ser415Phe, NP_001155132.1:p.Ser383Phe, NP_001155131.1:p.Ser418Phe, NP_001155129.1:p.Ser333Phe, XP_047274790.1:p.Ser519Phe

Select item 14906273064.

rs1490627306 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 6:135215650 (GRCh38)
6:135536788 (GRCh37)
Canonical SPDI:: NC_000006.12:135215649:C:A
Gene:: MYB (Varview), LOC105378011 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000006.12:g.135215650C>A, NC_000006.11:g.135536788C>A, NG_012330.1:g.39336C>A

Select item 14905935745.

rs1490593574 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:135179191 (GRCh38)
6:135500329 (GRCh37)
Canonical SPDI:: NC_000006.12:135179190:T:C
HGVS:: NC_000006.12:g.135179191T>C, NC_000006.11:g.135500329T>C, NG_012330.1:g.2877T>C

Select item 14905764686.

rs1490576468 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>- [Show Flanks]
Chromosome:: 6:135216693 (GRCh38)
6:135537831 (GRCh37)
Canonical SPDI:: NC_000006.12:135216691:TTT:T
Gene:: MYB (Varview), LOC105378011 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
-=0.000011/3 (TOPMED)
HGVS:: NC_000006.12:g.135216693_135216694del, NC_000006.11:g.135537831_135537832del, NG_012330.1:g.40379_40380del

Select item 14905651487.

rs1490565148 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:135184809 (GRCh38)
6:135505947 (GRCh37)
Canonical SPDI:: NC_000006.12:135184808:A:G
Gene:: MYB (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.135184809A>G, NC_000006.11:g.135505947A>G, NG_012330.1:g.8495A>G

Select item 14904891618.

rs1490489161 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:135207942 (GRCh38)
6:135529080 (GRCh37)
Canonical SPDI:: NC_000006.12:135207941:G:T
Gene:: MYB (Varview), LOC105378011 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.135207942G>T, NC_000006.11:g.135529080G>T, NG_012330.1:g.31628G>T

Select item 14901118969.

rs1490111896 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:135209830 (GRCh38)
6:135530968 (GRCh37)
Canonical SPDI:: NC_000006.12:135209829:A:G
Gene:: MYB (Varview), LOC105378011 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.135209830A>G, NC_000006.11:g.135530968A>G, NG_012330.1:g.33516A>G

Select item 149004975810.

rs1490049758 has merged into rs3071602 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 6:135183019 (GRCh38)
6:135504157 (GRCh37)
Canonical SPDI:: NC_000006.12:135183006:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000006.12:135183006:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000006.12:135183006:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000006.12:135183006:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000006.12:135183006:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000006.12:135183006:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000006.12:135183006:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000006.12:135183006:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000006.12:135183006:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000006.12:135183006:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000006.12:135183006:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:135183006:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:135183006:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:135183006:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: MYB (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000006.12:g.135183019_135183028del, NC_000006.12:g.135183020_135183028del, NC_000006.12:g.135183021_135183028del, NC_000006.12:g.135183022_135183028del, NC_000006.12:g.135183023_135183028del, NC_000006.12:g.135183024_135183028del, NC_000006.12:g.135183025_135183028del, NC_000006.12:g.135183026_135183028del, NC_000006.12:g.135183027_135183028del, NC_000006.12:g.135183028del, NC_000006.12:g.135183028dup, NC_000006.12:g.135183027_135183028dup, NC_000006.12:g.135183026_135183028dup, NC_000006.12:g.135183025_135183028dup, NC_000006.11:g.135504157_135504166del, NC_000006.11:g.135504158_135504166del, NC_000006.11:g.135504159_135504166del, NC_000006.11:g.135504160_135504166del, NC_000006.11:g.135504161_135504166del, NC_000006.11:g.135504162_135504166del, NC_000006.11:g.135504163_135504166del, NC_000006.11:g.135504164_135504166del, NC_000006.11:g.135504165_135504166del, NC_000006.11:g.135504166del, NC_000006.11:g.135504166dup, NC_000006.11:g.135504165_135504166dup, NC_000006.11:g.135504164_135504166dup, NC_000006.11:g.135504163_135504166dup, NG_012330.1:g.6705_6714del, NG_012330.1:g.6706_6714del, NG_012330.1:g.6707_6714del, NG_012330.1:g.6708_6714del, NG_012330.1:g.6709_6714del, NG_012330.1:g.6710_6714del, NG_012330.1:g.6711_6714del, NG_012330.1:g.6712_6714del, NG_012330.1:g.6713_6714del, NG_012330.1:g.6714del, NG_012330.1:g.6714dup, NG_012330.1:g.6713_6714dup, NG_012330.1:g.6712_6714dup, NG_012330.1:g.6711_6714dup

Select item 148992620211.

rs1489926202 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:135191315 (GRCh38)
6:135512453 (GRCh37)
Canonical SPDI:: NC_000006.12:135191314:A:G
Gene:: MYB (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.135191315A>G, NC_000006.11:g.135512453A>G, NG_012330.1:g.15001A>G

Select item 148978318412.

rs1489783184 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 6:135200815 (GRCh38)
6:135521953 (GRCh37)
Canonical SPDI:: NC_000006.12:135200814:A:C,NC_000006.12:135200814:A:G
Gene:: MYB (Varview), LOC105378011 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000006.12:g.135200815A>C, NC_000006.12:g.135200815A>G, NC_000006.11:g.135521953A>C, NC_000006.11:g.135521953A>G, NG_012330.1:g.24501A>C, NG_012330.1:g.24501A>G

Select item 148977833713.

rs1489778337 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:135209436 (GRCh38)
6:135530574 (GRCh37)
Canonical SPDI:: NC_000006.12:135209435:G:A
Gene:: MYB (Varview), LOC105378011 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000006.12:g.135209436G>A, NC_000006.11:g.135530574G>A, NG_012330.1:g.33122G>A

Select item 148970278114.

rs1489702781 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 6:135183662 (GRCh38)
6:135504800 (GRCh37)
Canonical SPDI:: NC_000006.12:135183661:C:A
Gene:: MYB (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000029/4 (GnomAD)
A=0.000035/1 (TOMMO)
HGVS:: NC_000006.12:g.135183662C>A, NC_000006.11:g.135504800C>A, NG_012330.1:g.7348C>A

Select item 148956403215.

rs1489564032 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 6:135181032 (GRCh38)
6:135502170 (GRCh37)
Canonical SPDI:: NC_000006.12:135181031:A:T
Gene:: MYB (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.135181032A>T, NC_000006.11:g.135502170A>T, NG_012330.1:g.4718A>T

Select item 148949107916.

rs1489491079 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:135180715 (GRCh38)
6:135501853 (GRCh37)
Canonical SPDI:: NC_000006.12:135180714:T:C
Gene:: MYB (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.135180715T>C, NC_000006.11:g.135501853T>C, NG_012330.1:g.4401T>C

Select item 148947182617.

rs1489471826 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 6:135211756 (GRCh38)
6:135532894 (GRCh37)
Canonical SPDI:: NC_000006.12:135211755:G:A,NC_000006.12:135211755:G:C
Gene:: MYB (Varview), LOC105378011 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000021/3 (GnomAD)
HGVS:: NC_000006.12:g.135211756G>A, NC_000006.12:g.135211756G>C, NC_000006.11:g.135532894G>A, NC_000006.11:g.135532894G>C, NG_012330.1:g.35442G>A, NG_012330.1:g.35442G>C

Select item 148945114618.

rs1489451146 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 6:135197179 (GRCh38)
6:135518317 (GRCh37)
Canonical SPDI:: NC_000006.12:135197178:A:C,NC_000006.12:135197178:A:G
Gene:: MYB (Varview), LOC105378011 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000006.12:g.135197179A>C, NC_000006.12:g.135197179A>G, NC_000006.11:g.135518317A>C, NC_000006.11:g.135518317A>G, NG_012330.1:g.20865A>C, NG_012330.1:g.20865A>G, NM_001130173.2:c.1422A>C, NM_001130173.2:c.1422A>G, NM_001130173.1:c.1422A>C, NM_001130173.1:c.1422A>G, NM_001161656.2:c.1413A>C, NM_001161656.2:c.1413A>G, NM_001161656.1:c.1413A>C, NM_001161656.1:c.1413A>G, NM_001161658.2:c.1374A>C, NM_001161658.2:c.1374A>G, NM_001161658.1:c.1374A>C, NM_001161658.1:c.1374A>G, XR_942444.3:n.1628A>C, XR_942444.3:n.1628A>G, XR_942444.2:n.1580A>C, XR_942444.2:n.1580A>G, XR_942444.1:n.1955A>C, XR_942444.1:n.1955A>G, XM_047418834.1:c.1362A>C, XM_047418834.1:c.1362A>G

Select item 148944383419.

rs1489443834 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:135188353 (GRCh38)
6:135509491 (GRCh37)
Canonical SPDI:: NC_000006.12:135188352:G:A
Gene:: MYB (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000026/7 (TOPMED)
HGVS:: NC_000006.12:g.135188353G>A, NC_000006.11:g.135509491G>A, NG_012330.1:g.12039G>A

Select item 148940649320.

rs1489406493 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACTG>- [Show Flanks]
Chromosome:: 6:135218935 (GRCh38)
6:135540073 (GRCh37)
Canonical SPDI:: NC_000006.12:135218931:CTGACTG:CTG
Gene:: MYB (Varview), LOC105378011 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,genic_downstream_transcript_variant,intron_variant,genic_upstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTG=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000015/4 (TOPMED)
HGVS:: NC_000006.12:g.135218935_135218938del, NC_000006.11:g.135540073_135540076del, NG_012330.1:g.42621_42624del, NM_005375.4:c.*955_*958del, NM_005375.3:c.*955_*958del, NM_005375.2:c.*955_*958del, NM_001130173.2:c.*955_*958del, NM_001130173.1:c.*955_*958del, NM_001161656.2:c.*955_*958del, NM_001161656.1:c.*955_*958del, NM_001161658.2:c.*955_*958del, NM_001161658.1:c.*955_*958del, NR_134961.2:n.3267_3270del, NR_134961.1:n.3260_3263del, NR_134965.2:n.3262_3265del, NR_134965.1:n.3255_3258del, NR_134963.2:n.3226_3229del, NR_134963.1:n.3219_3222del, NR_134958.2:n.3206_3209del, NR_134958.1:n.3199_3202del, NR_134959.2:n.3197_3200del, NR_134959.1:n.3190_3193del, NR_134960.2:n.3140_3143del, NR_134960.1:n.3133_3136del, NR_134964.2:n.3131_3134del, NR_134964.1:n.3124_3127del, NM_001130172.2:c.*955_*958del, NM_001130172.1:c.*955_*958del, NR_134962.2:n.2985_2988del, NR_134962.1:n.2978_2981del, NM_001161660.2:c.*955_*958del, NM_001161660.1:c.*955_*958del, NM_001161659.2:c.*955_*958del, NM_001161659.1:c.*955_*958del, NM_001161657.2:c.*955_*958del, NM_001161657.1:c.*955_*958del, XM_047418834.1:c.*955_*958del

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