SNP Links for Gene (Select 4674) - SNP

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Select item 14900440931.

rs1490044093 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: X:73214040 (GRCh38)
X:72433876 (GRCh37)
Canonical SPDI:: NC_000023.11:73214039:T:A
Gene:: NAP1L2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.0002/1 (ALFA)
HGVS:: NC_000023.11:g.73214040T>A, NC_000023.10:g.72433876T>A, NG_013274.1:g.5809A>T, NM_021963.4:c.453A>T, NM_021963.3:c.453A>T, NP_068798.1:p.Arg151Ser

Select item 14893774402.

rs1489377440 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:73216750 (GRCh38)
X:72436586 (GRCh37)
Canonical SPDI:: NC_000023.11:73216749:G:A
Gene:: NAP1L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.73216750G>A, NC_000023.10:g.72436586G>A, NG_013274.1:g.3099C>T

Select item 14888134303.

rs1488813430 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: X:73216660 (GRCh38)
X:72436496 (GRCh37)
Canonical SPDI:: NC_000023.11:73216659:G:A,NC_000023.11:73216659:G:C
Gene:: NAP1L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.73216660G>A, NC_000023.11:g.73216660G>C, NC_000023.10:g.72436496G>A, NC_000023.10:g.72436496G>C, NG_013274.1:g.3189C>T, NG_013274.1:g.3189C>G

Select item 14883986134.

rs1488398613 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: X:73214441 (GRCh38)
X:72434277 (GRCh37)
Canonical SPDI:: NC_000023.11:73214440:C:A
Gene:: NAP1L2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: A=0.000223/2 (ALFA)
A=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.73214441C>A, NC_000023.10:g.72434277C>A, NG_013274.1:g.5408G>T, NM_021963.4:c.52G>T, NM_021963.3:c.52G>T, NP_068798.1:p.Ala18Ser

Select item 14870711115.

rs1487071111 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:73213336 (GRCh38)
X:72433172 (GRCh37)
Canonical SPDI:: NC_000023.11:73213335:C:T
Gene:: NAP1L2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: T=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.73213336C>T, NC_000023.10:g.72433172C>T, NG_013274.1:g.6513G>A, NM_021963.4:c.1157G>A, NM_021963.3:c.1157G>A, NP_068798.1:p.Gly386Glu

Select item 14868074356.

rs1486807435 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:73214058 (GRCh38)
X:72433894 (GRCh37)
Canonical SPDI:: NC_000023.11:73214057:T:C
Gene:: NAP1L2 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.73214058T>C, NC_000023.10:g.72433894T>C, NG_013274.1:g.5791A>G, NM_021963.4:c.435A>G, NM_021963.3:c.435A>G

Select item 14863024367.

rs1486302436 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: X:73211987 (GRCh38)
X:72431823 (GRCh37)
Canonical SPDI:: NC_000023.11:73211986:T:G
Gene:: NAP1L2 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
G=0.000038/4 (GnomAD)
HGVS:: NC_000023.11:g.73211987T>G, NC_000023.10:g.72431823T>G, NG_013274.1:g.7862A>C

Select item 14858013258.

rs1485801325 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:73213470 (GRCh38)
X:72433306 (GRCh37)
Canonical SPDI:: NC_000023.11:73213469:G:C
Gene:: NAP1L2 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.73213470G>C, NC_000023.10:g.72433306G>C, NG_013274.1:g.6379C>G, NM_021963.4:c.1023C>G, NM_021963.3:c.1023C>G

Select item 14851173439.

rs1485117343 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:73214334 (GRCh38)
X:72434170 (GRCh37)
Canonical SPDI:: NC_000023.11:73214333:A:G
Gene:: NAP1L2 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000005/1 (GnomAD_exomes)
G=0.00001/1 (GnomAD)
G=0.000023/6 (TOPMED)
HGVS:: NC_000023.11:g.73214334A>G, NC_000023.10:g.72434170A>G, NG_013274.1:g.5515T>C, NM_021963.4:c.159T>C, NM_021963.3:c.159T>C

Select item 148503603710.

rs1485036037 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: X:73216631 (GRCh38)
X:72436467 (GRCh37)
Canonical SPDI:: NC_000023.11:73216630:T:G
Gene:: NAP1L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000019/2 (GnomAD)
HGVS:: NC_000023.11:g.73216631T>G, NC_000023.10:g.72436467T>G, NG_013274.1:g.3218A>C

Select item 148458020511.

rs1484580205 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:73213735 (GRCh38)
X:72433571 (GRCh37)
Canonical SPDI:: NC_000023.11:73213734:G:A
Gene:: NAP1L2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by cluster
MAF:: A=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.73213735G>A, NC_000023.10:g.72433571G>A, NG_013274.1:g.6114C>T, NM_021963.4:c.758C>T, NM_021963.3:c.758C>T, NP_068798.1:p.Thr253Ile

Select item 148433386512.

rs1484333865 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:73215233 (GRCh38)
X:72435069 (GRCh37)
Canonical SPDI:: NC_000023.11:73215232:G:A
Gene:: NAP1L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.73215233G>A, NC_000023.10:g.72435069G>A, NG_013274.1:g.4616C>T

Select item 148381108913.

rs1483811089 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:73212337 (GRCh38)
X:72432173 (GRCh37)
Canonical SPDI:: NC_000023.11:73212336:A:G
Gene:: NAP1L2 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000066/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.73212337A>G, NC_000023.10:g.72432173A>G, NG_013274.1:g.7512T>C, NM_021963.4:c.*773T>C, NM_021963.3:c.*773T>C

Select item 148207372514.

rs1482073725 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:73215099 (GRCh38)
X:72434935 (GRCh37)
Canonical SPDI:: NC_000023.11:73215098:T:C
Gene:: NAP1L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.73215099T>C, NC_000023.10:g.72434935T>C, NG_013274.1:g.4750A>G

Select item 148123064815.

rs1481230648 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:73215667 (GRCh38)
X:72435503 (GRCh37)
Canonical SPDI:: NC_000023.11:73215666:G:C
Gene:: NAP1L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.00001/1 (GnomAD)
C=0.000019/5 (TOPMED)
HGVS:: NC_000023.11:g.73215667G>C, NC_000023.10:g.72435503G>C, NG_013274.1:g.4182C>G

Select item 148101613016.

rs1481016130 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:73214229 (GRCh38)
X:72434065 (GRCh37)
Canonical SPDI:: NC_000023.11:73214228:T:C
Gene:: NAP1L2 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: C=0.000087/2 (ALFA)
C=0.000011/2 (GnomAD_exomes)
HGVS:: NC_000023.11:g.73214229T>C, NC_000023.10:g.72434065T>C, NG_013274.1:g.5620A>G, NM_021963.4:c.264A>G, NM_021963.3:c.264A>G

Select item 148010979017.

rs1480109790 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:73213863 (GRCh38)
X:72433699 (GRCh37)
Canonical SPDI:: NC_000023.11:73213862:A:G
Gene:: NAP1L2 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.73213863A>G, NC_000023.10:g.72433699A>G, NG_013274.1:g.5986T>C, NM_021963.4:c.630T>C, NM_021963.3:c.630T>C

Select item 148008175018.

rs1480081750 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:73212287 (GRCh38)
X:72432123 (GRCh37)
Canonical SPDI:: NC_000023.11:73212286:A:G
Gene:: NAP1L2 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00001/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.73212287A>G, NC_000023.10:g.72432123A>G, NG_013274.1:g.7562T>C

Select item 148003000219.

rs1480030002 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: X:73216642 (GRCh38)
X:72436478 (GRCh37)
Canonical SPDI:: NC_000023.11:73216641:G:T
Gene:: NAP1L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.0002/1 (ALFA)
HGVS:: NC_000023.11:g.73216642G>T, NC_000023.10:g.72436478G>T, NG_013274.1:g.3207C>A

Select item 147887894020.

rs1478878940 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:73216874 (GRCh38)
X:72436710 (GRCh37)
Canonical SPDI:: NC_000023.11:73216873:T:C
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000023.11:g.73216874T>C, NC_000023.10:g.72436710T>C, NG_013274.1:g.2975A>G

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