SNP Links for Gene (Select 4893) - SNP

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Select item 14915019331.

rs1491501933 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 1:114711605 (GRCh38)
1:115254226 (GRCh37)
Canonical SPDI:: NC_000001.11:114711604:CA:
Gene:: NRAS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.0059/70 (ALFA)
HGVS:: NC_000001.11:g.114711605_114711606del, NC_000001.10:g.115254226_115254227del, NG_007572.1:g.10289_10290del

Select item 14913309632.

rs1491330963 has merged into rs371081462 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAA>-,A,AA,AAAA,AAAAA,AAAAAA [Show Flanks]
Chromosome:: 1:114711616 (GRCh38)
1:115254237 (GRCh37)
Canonical SPDI:: NC_000001.11:114711605:AAAAAAAAAAAAA:AAAAAAAAAA,NC_000001.11:114711605:AAAAAAAAAAAAA:AAAAAAAAAAA,NC_000001.11:114711605:AAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:114711605:AAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:114711605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:114711605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAA
Gene:: NRAS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
-=0.00183/22 (TOMMO)
-=0.0046/8 (Korea1K)
-=0.025/1 (GENOME_DK)
-=0.05424/32 (NorthernSweden)
HGVS:: NC_000001.11:g.114711616_114711618del, NC_000001.11:g.114711617_114711618del, NC_000001.11:g.114711618del, NC_000001.11:g.114711618dup, NC_000001.11:g.114711617_114711618dup, NC_000001.11:g.114711616_114711618dup, NC_000001.10:g.115254237_115254239del, NC_000001.10:g.115254238_115254239del, NC_000001.10:g.115254239del, NC_000001.10:g.115254239dup, NC_000001.10:g.115254238_115254239dup, NC_000001.10:g.115254237_115254239dup, NG_007572.1:g.10287_10289del, NG_007572.1:g.10288_10289del, NG_007572.1:g.10289del, NG_007572.1:g.10289dup, NG_007572.1:g.10288_10289dup, NG_007572.1:g.10287_10289dup

Select item 14909923623.

rs1490992362 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAGAT>- [Show Flanks]
Chromosome:: 1:114712416 (GRCh38)
1:115255037 (GRCh37)
Canonical SPDI:: NC_000001.11:114712413:ATAAGAT:AT
Gene:: NRAS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AT=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.114712416_114712420del, NC_000001.10:g.115255037_115255041del, NG_007572.1:g.9477_9481del

Select item 14905058094.

rs1490505809 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:114706610 (GRCh38)
1:115249231 (GRCh37)
Canonical SPDI:: NC_000001.11:114706609:G:A
Gene:: NRAS (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.114706610G>A, NC_000001.10:g.115249231G>A, NG_007572.1:g.15285C>T, NM_002524.5:c.*1484C>T, NM_002524.4:c.*1484C>T

Select item 14901719125.

rs1490171912 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:114712931 (GRCh38)
1:115255552 (GRCh37)
Canonical SPDI:: NC_000001.11:114712930:G:T
Gene:: NRAS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.114712931G>T, NC_000001.10:g.115255552G>T, NG_007572.1:g.8964C>A

Select item 14900139066.

rs1490013906 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:114708091 (GRCh38)
1:115250712 (GRCh37)
Canonical SPDI:: NC_000001.11:114708090:G:A,NC_000001.11:114708090:G:T
Gene:: NRAS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000029/4 (GnomAD)
A=0.000049/13 (TOPMED)
HGVS:: NC_000001.11:g.114708091G>A, NC_000001.11:g.114708091G>T, NC_000001.10:g.115250712G>A, NC_000001.10:g.115250712G>T, NG_007572.1:g.13804C>T, NG_007572.1:g.13804C>A

Select item 14898904247.

rs1489890424 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:114704440 (GRCh38)
1:115247061 (GRCh37)
Canonical SPDI:: NC_000001.11:114704439:C:A
Gene:: NRAS (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.114704440C>A, NC_000001.10:g.115247061C>A, NG_007572.1:g.17455G>T

Select item 14892860098.

rs1489286009 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:114705135 (GRCh38)
1:115247756 (GRCh37)
Canonical SPDI:: NC_000001.11:114705134:A:C
Gene:: NRAS (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.114705135A>C, NC_000001.10:g.115247756A>C, NG_007572.1:g.16760T>G, NM_002524.5:c.*2959T>G, NM_002524.4:c.*2959T>G

Select item 14892700139.

rs1489270013 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:114709290 (GRCh38)
1:115251911 (GRCh37)
Canonical SPDI:: NC_000001.11:114709289:A:G
Gene:: NRAS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.114709290A>G, NC_000001.10:g.115251911A>G, NG_007572.1:g.12605T>C

Select item 148904604710.

rs1489046047 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:114706504 (GRCh38)
1:115249125 (GRCh37)
Canonical SPDI:: NC_000001.11:114706503:T:C
Gene:: NRAS (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.114706504T>C, NC_000001.10:g.115249125T>C, NG_007572.1:g.15391A>G, NM_002524.5:c.*1590A>G, NM_002524.4:c.*1590A>G

Select item 148892543511.

rs1488925435 [Homo sapiens]

Variant type:: DELINS
Alleles:: CCA>- [Show Flanks]
Chromosome:: 1:114714384 (GRCh38)
1:115257005 (GRCh37)
Canonical SPDI:: NC_000001.11:114714380:CCACCA:CCA
Gene:: NRAS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCACCA=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.114714381CCA[1], NC_000001.10:g.115257002CCA[1], NG_007572.1:g.7509TGG[1]

Select item 148881741612.

rs1488817416 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:114713054 (GRCh38)
1:115255675 (GRCh37)
Canonical SPDI:: NC_000001.11:114713053:C:T
Gene:: NRAS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.114713054C>T, NC_000001.10:g.115255675C>T, NG_007572.1:g.8841G>A

Select item 148878084213.

rs1488780842 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:114717685 (GRCh38)
1:115260306 (GRCh37)
Canonical SPDI:: NC_000001.11:114717684:C:T
Gene:: NRAS (Varview), CSDE1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.114717685C>T, NC_000001.10:g.115260306C>T, NG_007572.1:g.4210G>A, NM_007158.6:c.*484G>A, NM_007158.5:c.*484G>A, NM_001130523.3:c.*484G>A, NM_001130523.2:c.*484G>A, NM_001007553.3:c.*484G>A, NM_001007553.2:c.*484G>A, NM_001242891.2:c.*484G>A, NM_001242891.1:c.*484G>A, NM_001242892.2:c.*484G>A, NM_001242892.1:c.*484G>A, NM_001242893.2:c.*484G>A, NM_001242893.1:c.*484G>A

Select item 148873626314.

rs1488736263 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAA>- [Show Flanks]
Chromosome:: 1:114709487 (GRCh38)
1:115252108 (GRCh37)
Canonical SPDI:: NC_000001.11:114709484:AAGAA:AA
Gene:: NRAS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0.000071/1 (ALFA)
-=0.000035/1 (TOMMO)
-=0.000079/21 (TOPMED)
-=0.000086/12 (GnomAD)
HGVS:: NC_000001.11:g.114709487_114709489del, NC_000001.10:g.115252108_115252110del, NG_007572.1:g.12408_12410del

Select item 148868575615.

rs1488685756 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:114711666 (GRCh38)
1:115254287 (GRCh37)
Canonical SPDI:: NC_000001.11:114711665:G:A
Gene:: NRAS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.001566/7 (ALFA)
A=0.000036/5 (GnomAD)
A=0.001786/8 (Estonian)
HGVS:: NC_000001.11:g.114711666G>A, NC_000001.10:g.115254287G>A, NG_007572.1:g.10229C>T

Select item 148861056516.

rs1488610565 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:114710162 (GRCh38)
1:115252783 (GRCh37)
Canonical SPDI:: NC_000001.11:114710161:G:C
Gene:: NRAS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.114710162G>C, NC_000001.10:g.115252783G>C, NG_007572.1:g.11733C>G

Select item 148857932917.

rs1488579329 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:114709177 (GRCh38)
1:115251798 (GRCh37)
Canonical SPDI:: NC_000001.11:114709176:C:T
Gene:: NRAS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.114709177C>T, NC_000001.10:g.115251798C>T, NG_007572.1:g.12718G>A

Select item 148848009018.

rs1488480090 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:114718035 (GRCh38)
1:115260656 (GRCh37)
Canonical SPDI:: NC_000001.11:114718034:A:T
Gene:: NRAS (Varview), CSDE1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.114718035A>T, NC_000001.10:g.115260656A>T, NG_007572.1:g.3860T>A, NM_007158.6:c.*134T>A, NM_007158.5:c.*134T>A, NM_001130523.3:c.*134T>A, NM_001130523.2:c.*134T>A, NM_001007553.3:c.*134T>A, NM_001007553.2:c.*134T>A, NM_001242891.2:c.*134T>A, NM_001242891.1:c.*134T>A, NM_001242892.2:c.*134T>A, NM_001242892.1:c.*134T>A, NM_001242893.2:c.*134T>A, NM_001242893.1:c.*134T>A

Select item 148829077319.

rs1488290773 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:114710217 (GRCh38)
1:115252838 (GRCh37)
Canonical SPDI:: NC_000001.11:114710216:T:A
Gene:: NRAS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.114710217T>A, NC_000001.10:g.115252838T>A, NG_007572.1:g.11678A>T

Select item 148823903820.

rs1488239038 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:114712973 (GRCh38)
1:115255594 (GRCh37)
Canonical SPDI:: NC_000001.11:114712972:A:G
Gene:: NRAS (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.114712973A>G, NC_000001.10:g.115255594A>G, NG_007572.1:g.8922T>C

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