SNP Links for Gene (Select 51022) - SNP

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Select item 14909370471.

rs1490937047 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:193102986 (GRCh38)
1:193072116 (GRCh37)
Canonical SPDI:: NC_000001.11:193102985:G:A
Gene:: GLRX2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.193102986G>A, NC_000001.10:g.193072116G>A, NG_029745.1:g.8129C>T

Select item 14904997352.

rs1490499735 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:193102498 (GRCh38)
1:193071628 (GRCh37)
Canonical SPDI:: NC_000001.11:193102497:T:G
Gene:: GLRX2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
G=0.000531/9 (TOMMO)
HGVS:: NC_000001.11:g.193102498T>G, NC_000001.10:g.193071628T>G, NG_029745.1:g.8617A>C

Select item 14902433043.

rs1490243304 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:193101431 (GRCh38)
1:193070561 (GRCh37)
Canonical SPDI:: NC_000001.11:193101430:A:G
Gene:: GLRX2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
G=0.000342/1 (KOREAN)
HGVS:: NC_000001.11:g.193101431A>G, NC_000001.10:g.193070561A>G, NG_029745.1:g.9684T>C

Select item 14901335504.

rs1490133550 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:193103986 (GRCh38)
1:193073116 (GRCh37)
Canonical SPDI:: NC_000001.11:193103985:G:A
Gene:: GLRX2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.193103986G>A, NC_000001.10:g.193073116G>A, NG_029745.1:g.7129C>T

Select item 14897386895.

rs1489738689 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:193099812 (GRCh38)
1:193068942 (GRCh37)
Canonical SPDI:: NC_000001.11:193099811:G:C
Gene:: GLRX2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.193099812G>C, NC_000001.10:g.193068942G>C, NG_029745.1:g.11303C>G

Select item 14897127636.

rs1489712763 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:193100945 (GRCh38)
1:193070075 (GRCh37)
Canonical SPDI:: NC_000001.11:193100944:T:C
Gene:: GLRX2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.193100945T>C, NC_000001.10:g.193070075T>C, NG_029745.1:g.10170A>G

Select item 14895857747.

rs1489585774 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:193105510 (GRCh38)
1:193074640 (GRCh37)
Canonical SPDI:: NC_000001.11:193105509:C:A,NC_000001.11:193105509:C:T
Gene:: GLRX2 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.193105510C>A, NC_000001.11:g.193105510C>T, NC_000001.10:g.193074640C>A, NC_000001.10:g.193074640C>T, NG_029745.1:g.5605G>T, NG_029745.1:g.5605G>A, NG_076525.1:g.332C>A, NG_076525.1:g.332C>T

Select item 14893448978.

rs1489344897 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:193105357 (GRCh38)
1:193074487 (GRCh37)
Canonical SPDI:: NC_000001.11:193105356:G:A
Gene:: GLRX2 (Varview)
Functional Consequence:: intron_variant,missense_variant,coding_sequence_variant
HGVS:: NC_000001.11:g.193105357G>A, NC_000001.10:g.193074487G>A, NG_029745.1:g.5758C>T, NM_197962.3:c.26C>T, NM_197962.2:c.26C>T, NG_076525.1:g.179G>A, NP_932066.1:p.Ala9Val

Select item 14893322489.

rs1489332248 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:193107388 (GRCh38)
1:193076518 (GRCh37)
Canonical SPDI:: NC_000001.11:193107387:G:T
Gene:: GLRX2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.193107388G>T, NC_000001.10:g.193076518G>T, NG_029745.1:g.3727C>A

Select item 148920739510.

rs1489207395 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:193099650 (GRCh38)
1:193068780 (GRCh37)
Canonical SPDI:: NC_000001.11:193099649:T:C
Gene:: GLRX2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.193099650T>C, NC_000001.10:g.193068780T>C, NG_029745.1:g.11465A>G

Select item 148886146511.

rs1488861465 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:193108352 (GRCh38)
1:193077482 (GRCh37)
Canonical SPDI:: NC_000001.11:193108351:G:T
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.193108352G>T, NC_000001.10:g.193077482G>T, NG_029745.1:g.2763C>A

Select item 148855664912.

rs1488556649 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:193107914 (GRCh38)
1:193077044 (GRCh37)
Canonical SPDI:: NC_000001.11:193107913:G:A
Gene:: GLRX2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.193107914G>A, NC_000001.10:g.193077044G>A, NG_029745.1:g.3201C>T

Select item 148846400813.

rs1488464008 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:193105327 (GRCh38)
1:193074457 (GRCh37)
Canonical SPDI:: NC_000001.11:193105326:C:A
Gene:: GLRX2 (Varview)
Functional Consequence:: intron_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.193105327C>A, NC_000001.10:g.193074457C>A, NG_029745.1:g.5788G>T, NM_197962.3:c.56G>T, NM_197962.2:c.56G>T, NG_076525.1:g.149C>A, NP_932066.1:p.Gly19Val

Select item 148780579614.

rs1487805796 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:193102044 (GRCh38)
1:193071174 (GRCh37)
Canonical SPDI:: NC_000001.11:193102043:A:T
Gene:: GLRX2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000001.11:g.193102044A>T, NC_000001.10:g.193071174A>T, NG_029745.1:g.9071T>A

Select item 148775453315.

rs1487754533 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:193103088 (GRCh38)
1:193072218 (GRCh37)
Canonical SPDI:: NC_000001.11:193103087:A:G
Gene:: GLRX2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000021/3 (GnomAD)
G=0.000038/10 (TOPMED)
HGVS:: NC_000001.11:g.193103088A>G, NC_000001.10:g.193072218A>G, NG_029745.1:g.8027T>C

Select item 148774150916.

rs1487741509 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:193099915 (GRCh38)
1:193069045 (GRCh37)
Canonical SPDI:: NC_000001.11:193099914:A:G
Gene:: GLRX2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.193099915A>G, NC_000001.10:g.193069045A>G, NG_029745.1:g.11200T>C

Select item 148750974617.

rs1487509746 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 1:193105612 (GRCh38)
1:193074743 (GRCh37)
Canonical SPDI:: NC_000001.11:193105612:C:CC
Gene:: GLRX2 (Varview)
Functional Consequence:: frameshift_variant,intron_variant,upstream_transcript_variant,coding_sequence_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.193105613dup, NC_000001.10:g.193074743dup, NG_029745.1:g.5502dup, NM_016066.4:c.26dup, NG_076525.1:g.435dup, NP_057150.2:p.Ser9fs

Select item 148736657318.

rs1487366573 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:193106522 (GRCh38)
1:193075652 (GRCh37)
Canonical SPDI:: NC_000001.11:193106521:C:T
Gene:: GLRX2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.193106522C>T, NC_000001.10:g.193075652C>T, NG_029745.1:g.4593G>A, NM_001319291.1:c.-9G>A

Select item 148731419919.

rs1487314199 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:193107485 (GRCh38)
1:193076615 (GRCh37)
Canonical SPDI:: NC_000001.11:193107484:G:A
Gene:: GLRX2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.193107485G>A, NC_000001.10:g.193076615G>A, NG_029745.1:g.3630C>T

Select item 148720657720.

rs1487206577 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: 1:193100211 (GRCh38)
1:193069341 (GRCh37)
Canonical SPDI:: NC_000001.11:193100210:A:C,NC_000001.11:193100210:A:G,NC_000001.11:193100210:A:T
Gene:: GLRX2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000001.11:g.193100211A>C, NC_000001.11:g.193100211A>G, NC_000001.11:g.193100211A>T, NC_000001.10:g.193069341A>C, NC_000001.10:g.193069341A>G, NC_000001.10:g.193069341A>T, NG_029745.1:g.10904T>G, NG_029745.1:g.10904T>C, NG_029745.1:g.10904T>A

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