SNP Links for Gene (Select 51046) - SNP

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Select item 14909882061.

rs1490988206 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 18:57352607 (GRCh38)
18:55019838 (GRCh37)
Canonical SPDI:: NC_000018.10:57352606:C:T
Gene:: ST8SIA3 (Varview)
Functional Consequence:: 5_prime_UTR_variant
HGVS:: NC_000018.10:g.57352607C>T, NC_000018.9:g.55019838C>T, NM_015879.3:c.-240C>T, NM_015879.2:c.-240C>T

Select item 14909727772.

rs1490972777 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:57354551 (GRCh38)
18:55021782 (GRCh37)
Canonical SPDI:: NC_000018.10:57354550:G:A
Gene:: ST8SIA3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000018.10:g.57354551G>A, NC_000018.9:g.55021782G>A

Select item 14905792233.

rs1490579223 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 18:57365251 (GRCh38)
18:55032482 (GRCh37)
Canonical SPDI:: NC_000018.10:57365250:T:C
Gene:: ST8SIA3 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000018.10:g.57365251T>C, NC_000018.9:g.55032482T>C, NM_015879.3:c.*4974T>C, NM_015879.2:c.*4974T>C

Select item 14905733484.

rs1490573348 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 18:57352234 (GRCh38)
18:55019465 (GRCh37)
Canonical SPDI:: NC_000018.10:57352233:A:C
Gene:: ST8SIA3 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.57352234A>C, NC_000018.9:g.55019465A>C

Select item 14904810935.

rs1490481093 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:57357196 (GRCh38)
18:55024427 (GRCh37)
Canonical SPDI:: NC_000018.10:57357195:G:A
Gene:: ST8SIA3 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000018.10:g.57357196G>A, NC_000018.9:g.55024427G>A, NM_015879.3:c.586G>A, NM_015879.2:c.586G>A, NM_017529.1:c.586G>A, NP_056963.2:p.Ala196Thr

Select item 14902510446.

rs1490251044 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:57366369 (GRCh38)
18:55033600 (GRCh37)
Canonical SPDI:: NC_000018.10:57366368:G:A
Gene:: ST8SIA3 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000018.10:g.57366369G>A, NC_000018.9:g.55033600G>A, NM_015879.3:c.*6092G>A, NM_015879.2:c.*6092G>A

Select item 14901190087.

rs1490119008 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:57358211 (GRCh38)
18:55025442 (GRCh37)
Canonical SPDI:: NC_000018.10:57358210:G:A
Gene:: ST8SIA3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.57358211G>A, NC_000018.9:g.55025442G>A

Select item 14899904418.

rs1489990441 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 18:57367130 (GRCh38)
18:55034361 (GRCh37)
Canonical SPDI:: NC_000018.10:57367129:A:G
Gene:: ST8SIA3 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000018.10:g.57367130A>G, NC_000018.9:g.55034361A>G, NM_015879.3:c.*6853A>G, NM_015879.2:c.*6853A>G

Select item 14897266479.

rs1489726647 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 18:57365883 (GRCh38)
18:55033114 (GRCh37)
Canonical SPDI:: NC_000018.10:57365882:G:C
Gene:: ST8SIA3 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.57365883G>C, NC_000018.9:g.55033114G>C, NM_015879.3:c.*5606G>C, NM_015879.2:c.*5606G>C

Select item 148967301110.

rs1489673011 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:57358882 (GRCh38)
18:55026113 (GRCh37)
Canonical SPDI:: NC_000018.10:57358881:G:A
Gene:: ST8SIA3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000342/1 (KOREAN)
HGVS:: NC_000018.10:g.57358882G>A, NC_000018.9:g.55026113G>A

Select item 148955419911.

rs1489554199 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:57362915 (GRCh38)
18:55030146 (GRCh37)
Canonical SPDI:: NC_000018.10:57362914:G:A
Gene:: ST8SIA3 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000018.10:g.57362915G>A, NC_000018.9:g.55030146G>A, NM_015879.3:c.*2638G>A, NM_015879.2:c.*2638G>A

Select item 148940184212.

rs1489401842 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 18:57364106 (GRCh38)
18:55031337 (GRCh37)
Canonical SPDI:: NC_000018.10:57364105:C:G,NC_000018.10:57364105:C:T
Gene:: ST8SIA3 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.57364106C>G, NC_000018.10:g.57364106C>T, NC_000018.9:g.55031337C>G, NC_000018.9:g.55031337C>T, NM_015879.3:c.*3829C>G, NM_015879.3:c.*3829C>T, NM_015879.2:c.*3829C>G, NM_015879.2:c.*3829C>T

Select item 148939410613.

rs1489394106 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 18:57352288 (GRCh38)
18:55019519 (GRCh37)
Canonical SPDI:: NC_000018.10:57352287:T:G
Gene:: ST8SIA3 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.57352288T>G, NC_000018.9:g.55019519T>G

Select item 148937386414.

rs1489373864 [Homo sapiens]

Variant type:: SNV:
Alleles:: T>A
Chromosome:: no mapping
Canonical SPDI:

Select item 148883143415.

rs1488831434 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 18:57351306 (GRCh38)
18:55018537 (GRCh37)
Canonical SPDI:: NC_000018.10:57351305:A:C
Gene:: ST8SIA3 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000018.10:g.57351306A>C, NC_000018.9:g.55018537A>C

Select item 148840833616.

rs1488408336 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 18:57362434 (GRCh38)
18:55029665 (GRCh37)
Canonical SPDI:: NC_000018.10:57362433:C:A
Gene:: ST8SIA3 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000018.10:g.57362434C>A, NC_000018.9:g.55029665C>A, NM_015879.3:c.*2157C>A, NM_015879.2:c.*2157C>A

Select item 148827451417.

rs1488274514 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:57365074 (GRCh38)
18:55032305 (GRCh37)
Canonical SPDI:: NC_000018.10:57365073:G:A
Gene:: ST8SIA3 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000018.10:g.57365074G>A, NC_000018.9:g.55032305G>A, NM_015879.3:c.*4797G>A, NM_015879.2:c.*4797G>A

Select item 148818122418.

rs1488181224 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 18:57352201 (GRCh38)
18:55019432 (GRCh37)
Canonical SPDI:: NC_000018.10:57352200:T:G
Gene:: ST8SIA3 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.57352201T>G, NC_000018.9:g.55019432T>G

Select item 148815095319.

rs1488150953 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 18:57368525 (GRCh38)
18:55035756 (GRCh37)
Canonical SPDI:: NC_000018.10:57368524:A:T
Gene:: ST8SIA3 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000142/2 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000018.10:g.57368525A>T, NC_000018.9:g.55035756A>T, NM_015879.3:c.*8248A>T, NM_015879.2:c.*8248A>T

Select item 148800196220.

rs1488001962 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 18:57354889 (GRCh38)
18:55022120 (GRCh37)
Canonical SPDI:: NC_000018.10:57354888:A:G
Gene:: ST8SIA3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000018.10:g.57354889A>G, NC_000018.9:g.55022120A>G

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