SNP Links for Gene (Select 51398) - SNP

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Items: 1 to 20 of 1732

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Select item 14901678281.

rs1490167828 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:12672668 (GRCh38)
19:12783482 (GRCh37)
Canonical SPDI:: NC_000019.10:12672667:G:A
Gene:: DHPS (Varview), WDR83 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.12672668G>A, NC_000019.9:g.12783482G>A, NG_015814.1:g.10865G>A

Select item 14900526822.

rs1490052682 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:12670538 (GRCh38)
19:12781352 (GRCh37)
Canonical SPDI:: NC_000019.10:12670537:C:T
Gene:: WDR83OS (Varview), WDR83 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.12670538C>T, NC_000019.9:g.12781352C>T, NG_008318.1:g.1240G>A, NG_015814.1:g.8735C>T

Select item 14888888873.

rs1488888887 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:12671614 (GRCh38)
19:12782428 (GRCh37)
Canonical SPDI:: NC_000019.10:12671613:T:C
Gene:: WDR83 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.12671614T>C, NC_000019.9:g.12782428T>C, NG_008318.1:g.164A>G, NG_015814.1:g.9811T>C

Select item 14886622404.

rs1488662240 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:12671048 (GRCh38)
19:12781862 (GRCh37)
Canonical SPDI:: NC_000019.10:12671047:C:T
Gene:: WDR83OS (Varview), WDR83 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000019.10:g.12671048C>T, NC_000019.9:g.12781862C>T, NG_008318.1:g.730G>A, NG_015814.1:g.9245C>T

Select item 14886237155.

rs1488623715 [Homo sapiens]

Variant type:: DELINS
Alleles:: CCT>- [Show Flanks]
Chromosome:: 19:12671807 (GRCh38)
19:12782621 (GRCh37)
Canonical SPDI:: NC_000019.10:12671804:CTCCT:CT
Gene:: WDR83 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.12671807_12671809del, NC_000019.9:g.12782621_12782623del, NG_015814.1:g.10004_10006del

Select item 14885923066.

rs1488592306 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:12672702 (GRCh38)
19:12783516 (GRCh37)
Canonical SPDI:: NC_000019.10:12672701:C:T
Gene:: DHPS (Varview), WDR83 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000546/1 (Korea1K)
HGVS:: NC_000019.10:g.12672702C>T, NC_000019.9:g.12783516C>T, NG_015814.1:g.10899C>T

Select item 14885524207.

rs1488552420 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:12672091 (GRCh38)
19:12782905 (GRCh37)
Canonical SPDI:: NC_000019.10:12672090:G:T
Gene:: DHPS (Varview), WDR83 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.12672091G>T, NC_000019.9:g.12782905G>T, NG_015814.1:g.10288G>T, NG_068109.1:g.281G>T

Select item 14883476098.

rs1488347609 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAT>- [Show Flanks]
Chromosome:: 19:12671041 (GRCh38)
19:12781855 (GRCh37)
Canonical SPDI:: NC_000019.10:12671031:AATAATAATAAT:AATAATAAT
Gene:: WDR83OS (Varview), WDR83 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AATAATAAT=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000011/3 (TOPMED)
HGVS:: NC_000019.10:g.12671032AAT[3], NC_000019.9:g.12781846AAT[3], NG_008318.1:g.735ATT[3], NG_015814.1:g.9229AAT[3]

Select item 14875507639.

rs1487550763 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:12672551 (GRCh38)
19:12783365 (GRCh37)
Canonical SPDI:: NC_000019.10:12672550:T:C
Gene:: DHPS (Varview), WDR83 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.00062/1 (ALFA)
C=0.00002/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.12672551T>C, NC_000019.9:g.12783365T>C, NG_015814.1:g.10748T>C, NG_068109.1:g.741T>C, NR_161468.1:n.1335A>G

Select item 148701473210.

rs1487014732 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:12671508 (GRCh38)
19:12782322 (GRCh37)
Canonical SPDI:: NC_000019.10:12671507:C:T
Gene:: WDR83 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.12671508C>T, NC_000019.9:g.12782322C>T, NG_008318.1:g.270G>A, NG_015814.1:g.9705C>T

Select item 148694056011.

rs1486940560 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 19:12669410 (GRCh38)
19:12780224 (GRCh37)
Canonical SPDI:: NC_000019.10:12669409:T:C,NC_000019.10:12669409:T:G
Gene:: WDR83OS (Varview), WDR83 (Varview)
Functional Consequence:: 5_prime_UTR_variant,upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.12669410T>C, NC_000019.10:g.12669410T>G, NC_000019.9:g.12780224T>C, NC_000019.9:g.12780224T>G, NG_008318.1:g.2368A>G, NG_008318.1:g.2368A>C, NG_015814.1:g.7607T>C, NG_015814.1:g.7607T>G, NM_016145.4:c.-7A>G, NM_016145.4:c.-7A>C, NM_016145.3:c.-7A>G, NM_016145.3:c.-7A>C

Select item 148687889712.

rs1486878897 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 19:12670232 (GRCh38)
19:12781046 (GRCh37)
Canonical SPDI:: NC_000019.10:12670231:C:A,NC_000019.10:12670231:C:T
Gene:: WDR83OS (Varview), WDR83 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,missense_variant,coding_sequence_variant,synonymous_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
T=0.000142/2 (TOMMO)
HGVS:: NC_000019.10:g.12670232C>A, NC_000019.10:g.12670232C>T, NC_000019.9:g.12781046C>A, NC_000019.9:g.12781046C>T, NG_008318.1:g.1546G>T, NG_008318.1:g.1546G>A, NG_015814.1:g.8429C>A, NG_015814.1:g.8429C>T, NM_032332.4:c.277C>A, NM_032332.4:c.277C>T, NM_032332.3:c.277C>A, NM_032332.3:c.277C>T, NM_001099737.3:c.277C>A, NM_001099737.3:c.277C>T, NM_001099737.2:c.277C>A, NM_001099737.2:c.277C>T, NR_029375.2:n.602C>A, NR_029375.2:n.602C>T, NR_029375.1:n.605C>A, NR_029375.1:n.605C>T, NP_115708.1:p.Leu93Met, NP_001093207.1:p.Leu93Met

Select item 148668577313.

rs1486685773 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:12671143 (GRCh38)
19:12781957 (GRCh37)
Canonical SPDI:: NC_000019.10:12671142:C:T
Gene:: WDR83OS (Varview), WDR83 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.12671143C>T, NC_000019.9:g.12781957C>T, NG_008318.1:g.635G>A, NG_015814.1:g.9340C>T

Select item 148659838814.

rs1486598388 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 19:12669881 (GRCh38)
19:12780695 (GRCh37)
Canonical SPDI:: NC_000019.10:12669880:G:A,NC_000019.10:12669880:G:T
Gene:: WDR83OS (Varview), WDR83 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,missense_variant,coding_sequence_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.12669881G>A, NC_000019.10:g.12669881G>T, NC_000019.9:g.12780695G>A, NC_000019.9:g.12780695G>T, NG_008318.1:g.1897C>T, NG_008318.1:g.1897C>A, NG_015814.1:g.8078G>A, NG_015814.1:g.8078G>T, NM_032332.4:c.91G>A, NM_032332.4:c.91G>T, NM_032332.3:c.91G>A, NM_032332.3:c.91G>T, NM_001099737.3:c.91G>A, NM_001099737.3:c.91G>T, NM_001099737.2:c.91G>A, NM_001099737.2:c.91G>T, NR_029375.2:n.433G>A, NR_029375.2:n.433G>T, NR_029375.1:n.436G>A, NR_029375.1:n.436G>T, NP_115708.1:p.Val31Ile, NP_115708.1:p.Val31Leu, NP_001093207.1:p.Val31Ile, NP_001093207.1:p.Val31Leu

Select item 148616943015.

rs1486169430 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 19:12672659 (GRCh38)
19:12783473 (GRCh37)
Canonical SPDI:: NC_000019.10:12672658:G:A,NC_000019.10:12672658:G:C
Gene:: DHPS (Varview), WDR83 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.12672659G>A, NC_000019.10:g.12672659G>C, NC_000019.9:g.12783473G>A, NC_000019.9:g.12783473G>C, NG_015814.1:g.10856G>A, NG_015814.1:g.10856G>C

Select item 148591559916.

rs1485915599 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:12670696 (GRCh38)
19:12781510 (GRCh37)
Canonical SPDI:: NC_000019.10:12670695:C:A
Gene:: WDR83OS (Varview), WDR83 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,coding_sequence_variant,synonymous_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.12670696C>A, NC_000019.9:g.12781510C>A, NG_008318.1:g.1082G>T, NG_015814.1:g.8893C>A, NM_032332.4:c.381C>A, NM_032332.3:c.381C>A, NM_001099737.3:c.381C>A, NM_001099737.2:c.381C>A, NR_029375.2:n.706C>A, NR_029375.1:n.709C>A

Select item 148532311817.

rs1485323118 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:12669162 (GRCh38)
19:12779976 (GRCh37)
Canonical SPDI:: NC_000019.10:12669161:C:T
Gene:: WDR83OS (Varview), WDR83 (Varview)
Functional Consequence:: missense_variant,genic_upstream_transcript_variant,coding_sequence_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.12669162C>T, NC_000019.9:g.12779976C>T, NG_008318.1:g.2616G>A, NG_015814.1:g.7359C>T, NM_016145.4:c.122G>A, NM_016145.3:c.122G>A, NP_057229.1:p.Gly41Asp

Select item 148493232118.

rs1484932321 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:12671281 (GRCh38)
19:12782095 (GRCh37)
Canonical SPDI:: NC_000019.10:12671280:T:C
Gene:: WDR83OS (Varview), WDR83 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: C=0.00007/1 (TOMMO)
HGVS:: NC_000019.10:g.12671281T>C, NC_000019.9:g.12782095T>C, NG_008318.1:g.497A>G, NG_015814.1:g.9478T>C

Select item 148421517219.

rs1484215172 [Homo sapiens]

Variant type:: DELINS
Alleles:: GGGGTTTCGCCATGTTGGCC>- [Show Flanks]
Chromosome:: 19:12671887 (GRCh38)
19:12782701 (GRCh37)
Canonical SPDI:: NC_000019.10:12671885:CGGGGTTTCGCCATGTTGGCC:C
Gene:: WDR83 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
-=0.000019/5 (TOPMED)
HGVS:: NC_000019.10:g.12671887_12671906del, NC_000019.9:g.12782701_12782720del, NG_015814.1:g.10084_10103del, NG_068109.1:g.77_96del

Select item 148415947620.

rs1484159476 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 19:12669779 (GRCh38)
19:12780593 (GRCh37)
Canonical SPDI:: NC_000019.10:12669778:A:C,NC_000019.10:12669778:A:G
Gene:: WDR83OS (Varview), WDR83 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,5_prime_UTR_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.12669779A>C, NC_000019.10:g.12669779A>G, NC_000019.9:g.12780593A>C, NC_000019.9:g.12780593A>G, NG_008318.1:g.1999T>G, NG_008318.1:g.1999T>C, NG_015814.1:g.7976A>C, NG_015814.1:g.7976A>G, NM_032332.4:c.-12A>C, NM_032332.4:c.-12A>G, NM_032332.3:c.-12A>C, NM_032332.3:c.-12A>G, NM_001099737.3:c.-12A>C, NM_001099737.3:c.-12A>G, NM_001099737.2:c.-12A>C, NM_001099737.2:c.-12A>G, NR_029375.2:n.331A>C, NR_029375.2:n.331A>G, NR_029375.1:n.334A>C, NR_029375.1:n.334A>G

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