SNP Links for Gene (Select 51567) - SNP

Links from Gene

Items: 1 to 20 of 1000

<< First< Prev

Page of 50

Next >Last >>

Select item 14910778671.

rs1491077867 has merged into rs11370284 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAATTTTCAATTAACAAGCAAAAAAATATTAATAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 6:24651136 (GRCh38)
6:24651364 (GRCh37)
Canonical SPDI:: NC_000006.12:24651124:AAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000006.12:24651124:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000006.12:24651124:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000006.12:24651124:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000006.12:24651124:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000006.12:24651124:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000006.12:24651124:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000006.12:24651124:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000006.12:24651124:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000006.12:24651124:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:24651124:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:24651124:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAATTTTCAATTAACAAGCAAAAAAATATTAATAAAAAAAAAAAAAAAAAAAAAAA
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAA=0./0 (ALFA)
-=0.4517/2262 (1000Genomes)
HGVS:: NC_000006.12:g.24651136_24651141del, NC_000006.12:g.24651137_24651141del, NC_000006.12:g.24651138_24651141del, NC_000006.12:g.24651139_24651141del, NC_000006.12:g.24651140_24651141del, NC_000006.12:g.24651141del, NC_000006.12:g.24651141dup, NC_000006.12:g.24651140_24651141dup, NC_000006.12:g.24651139_24651141dup, NC_000006.12:g.24651133_24651141dup, NC_000006.12:g.24651130_24651141dup, NC_000006.12:g.24651125_24651141A[23]T[4]CAATTAACAAGCAAAAAAATATTAATAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000006.11:g.24651364_24651369del, NC_000006.11:g.24651365_24651369del, NC_000006.11:g.24651366_24651369del, NC_000006.11:g.24651367_24651369del, NC_000006.11:g.24651368_24651369del, NC_000006.11:g.24651369del, NC_000006.11:g.24651369dup, NC_000006.11:g.24651368_24651369dup, NC_000006.11:g.24651367_24651369dup, NC_000006.11:g.24651361_24651369dup, NC_000006.11:g.24651358_24651369dup, NC_000006.11:g.24651353_24651369A[23]T[4]CAATTAACAAGCAAAAAAATATTAATAAAAAAAAAAAAAAAAAAAAAAA[1], NG_016206.1:g.26_31del, NG_016206.1:g.27_31del, NG_016206.1:g.28_31del, NG_016206.1:g.29_31del, NG_016206.1:g.30_31del, NG_016206.1:g.31del, NG_016206.1:g.31dup, NG_016206.1:g.30_31dup, NG_016206.1:g.29_31dup, NG_016206.1:g.23_31dup, NG_016206.1:g.20_31dup, NG_016206.1:g.15_31T[23]ATTAATATTTTTTTGCTTGTTAATTGAAAATTTTTTTTTTTTTTTTTTTTTTT[1], NG_052787.1:g.20758_20763del, NG_052787.1:g.20759_20763del, NG_052787.1:g.20760_20763del, NG_052787.1:g.20761_20763del, NG_052787.1:g.20762_20763del, NG_052787.1:g.20763del, NG_052787.1:g.20763dup, NG_052787.1:g.20762_20763dup, NG_052787.1:g.20761_20763dup, NG_052787.1:g.20755_20763dup, NG_052787.1:g.20752_20763dup, NG_052787.1:g.20747_20763T[23]ATTAATATTTTTTTGCTTGTTAATTGAAAATTTTTTTTTTTTTTTTTTTTTTT[1]

Select item 14910347132.

rs1491034713 has merged into rs36036133 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT,TTTT,TTTTTTTTTTTATTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 6:24651607 (GRCh38)
6:24651835 (GRCh37)
Canonical SPDI:: NC_000006.12:24651594:TTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000006.12:24651594:TTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000006.12:24651594:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000006.12:24651594:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000006.12:24651594:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTT
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTTT=0./0 (ALFA)
-=0.3065/1289 (1000Genomes)
HGVS:: NC_000006.12:g.24651607_24651608del, NC_000006.12:g.24651608del, NC_000006.12:g.24651608dup, NC_000006.12:g.24651607_24651608dup, NC_000006.12:g.24651595_24651608T[23]ATTTTTTTTTTTTTTTTTT[1], NC_000006.11:g.24651835_24651836del, NC_000006.11:g.24651836del, NC_000006.11:g.24651836dup, NC_000006.11:g.24651835_24651836dup, NC_000006.11:g.24651823_24651836T[23]ATTTTTTTTTTTTTTTTTT[1], NG_052787.1:g.20292_20293del, NG_052787.1:g.20293del, NG_052787.1:g.20293dup, NG_052787.1:g.20292_20293dup, NG_052787.1:g.20280_20293A[18]TAAAAAAAAAAAAAAAAAAAAAAA[1]

Select item 14908634043.

rs1490863404 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 6:24662585 (GRCh38)
6:24662813 (GRCh37)
Canonical SPDI:: NC_000006.12:24662584:C:G,NC_000006.12:24662584:C:T
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0./0 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000006.12:g.24662585C>G, NC_000006.12:g.24662585C>T, NC_000006.11:g.24662813C>G, NC_000006.11:g.24662813C>T, NG_052787.1:g.9303G>C, NG_052787.1:g.9303G>A

Select item 14908472224.

rs1490847222 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:24663638 (GRCh38)
6:24663866 (GRCh37)
Canonical SPDI:: NC_000006.12:24663637:G:A
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000006.12:g.24663638G>A, NC_000006.11:g.24663866G>A, NG_052787.1:g.8250C>T

Select item 14906649995.

rs1490664999 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:24654303 (GRCh38)
6:24654531 (GRCh37)
Canonical SPDI:: NC_000006.12:24654302:G:A
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.24654303G>A, NC_000006.11:g.24654531G>A, NG_052787.1:g.17585C>T

Select item 14904202666.

rs1490420266 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:24659341 (GRCh38)
6:24659569 (GRCh37)
Canonical SPDI:: NC_000006.12:24659340:A:G
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000006.12:g.24659341A>G, NC_000006.11:g.24659569A>G, NG_052787.1:g.12547T>C

Select item 14903942347.

rs1490394234 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 6:24659578 (GRCh38)
6:24659806 (GRCh37)
Canonical SPDI:: NC_000006.12:24659577:C:A
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000029/4 (GnomAD)
A=0.000038/10 (TOPMED)
HGVS:: NC_000006.12:g.24659578C>A, NC_000006.11:g.24659806C>A, NG_052787.1:g.12310G>T

Select item 14903938398.

rs1490393839 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 6:24661213 (GRCh38)
6:24661441 (GRCh37)
Canonical SPDI:: NC_000006.12:24661212:C:G
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.24661213C>G, NC_000006.11:g.24661441C>G, NG_052787.1:g.10675G>C

Select item 14903372369.

rs1490337236 [Homo sapiens]

Variant type:: DELINS
Alleles:: CAGAA>- [Show Flanks]
Chromosome:: 6:24655258 (GRCh38)
6:24655486 (GRCh37)
Canonical SPDI:: NC_000006.12:24655253:AGAACAGAA:AGAA
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGAA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.24655258_24655262del, NC_000006.11:g.24655486_24655490del, NG_052787.1:g.16630_16634del

Select item 149028538410.

rs1490285384 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 6:24656287 (GRCh38)
6:24656515 (GRCh37)
Canonical SPDI:: NC_000006.12:24656286:G:A,NC_000006.12:24656286:G:C
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000006.12:g.24656287G>A, NC_000006.12:g.24656287G>C, NC_000006.11:g.24656515G>A, NC_000006.11:g.24656515G>C, NG_052787.1:g.15601C>T, NG_052787.1:g.15601C>G

Select item 149014020011.

rs1490140200 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 6:24663822 (GRCh38)
6:24664050 (GRCh37)
Canonical SPDI:: NC_000006.12:24663821:C:A
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.000084/1 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.24663822C>A, NC_000006.11:g.24664050C>A, NG_052787.1:g.8066G>T

Select item 149002855612.

rs1490028556 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 6:24664169 (GRCh38)
6:24664397 (GRCh37)
Canonical SPDI:: NC_000006.12:24664167:TCT:T
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000006.12:g.24664169_24664170del, NC_000006.11:g.24664397_24664398del, NG_052787.1:g.7719_7720del

Select item 148997649313.

rs1489976493 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 6:24662631 (GRCh38)
6:24662860 (GRCh37)
Canonical SPDI:: NC_000006.12:24662631:A:AA
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
A=0.000057/15 (TOPMED)
A=0.000057/8 (GnomAD)
HGVS:: NC_000006.12:g.24662632dup, NC_000006.11:g.24662860dup, NG_052787.1:g.9256dup

Select item 148993023214.

rs1489930232 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:24660485 (GRCh38)
6:24660713 (GRCh37)
Canonical SPDI:: NC_000006.12:24660484:A:G
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.24660485A>G, NC_000006.11:g.24660713A>G, NG_052787.1:g.11403T>C

Select item 148989947115.

rs1489899471 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:24658168 (GRCh38)
6:24658396 (GRCh37)
Canonical SPDI:: NC_000006.12:24658167:A:G
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.000084/1 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.24658168A>G, NC_000006.11:g.24658396A>G, NG_052787.1:g.13720T>C

Select item 148984766916.

rs1489847669 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 6:24654832 (GRCh38)
6:24655060 (GRCh37)
Canonical SPDI:: NC_000006.12:24654831:GG:G
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.24654833del, NC_000006.11:g.24655061del, NG_052787.1:g.17056del

Select item 148979666317.

rs1489796663 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:24655765 (GRCh38)
6:24655993 (GRCh37)
Canonical SPDI:: NC_000006.12:24655764:G:A
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.24655765G>A, NC_000006.11:g.24655993G>A, NG_052787.1:g.16123C>T

Select item 148970564118.

rs1489705641 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:24664530 (GRCh38)
6:24664758 (GRCh37)
Canonical SPDI:: NC_000006.12:24664529:T:C
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.24664530T>C, NC_000006.11:g.24664758T>C, NG_052787.1:g.7358A>G

Select item 148909356719.

rs1489093567 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 6:24649584 (GRCh38)
6:24649812 (GRCh37)
Canonical SPDI:: NC_000006.12:24649583:A:C
Gene:: TDP2 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by cluster
MAF:: C=0.0147/27 (Korea1K)
A=0.5/1 (Siberian)
HGVS:: NC_000006.12:g.24649584A>C, NC_000006.11:g.24649812A>C, NG_016206.1:g.1572T>G, NG_052787.1:g.22304T>G

Select item 148900443620.

rs1489004436 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:24661328 (GRCh38)
6:24661556 (GRCh37)
Canonical SPDI:: NC_000006.12:24661327:A:G
Gene:: TDP2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000006.12:g.24661328A>G, NC_000006.11:g.24661556A>G, NG_052787.1:g.10560T>C

<< First< Prev

Page of 50

Next >Last >>

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 1000

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity