SNP Links for Gene (Select 51714) - SNP

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Select item 14915076701.

rs1491507670 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CTGTGTGT [Show Flanks]
Chromosome:: 3:150611005 (GRCh38)
3:150328793 (GRCh37)
Canonical SPDI:: NC_000003.12:150611005:TGTGTGT:TGTGTGTCTGTGTGT
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TGTGTGTCTGTGTGT=0./0 (ALFA)
TGTGTGTC=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.150611006_150611012TG[3]TCTGTGTGT[1], NC_000003.11:g.150328793_150328799TG[3]TCTGTGTGT[1], NG_005531.4:g.1168_1174AC[3]AGACACACA[1]

Select item 14914497722.

rs1491449772 has merged into rs113532087 [Homo sapiens]

Variant type:: DELINS
Alleles:: GTGTGTGTGTGTGTGTGT>-,GT,GTGT,GTGTGT,GTGTGTGT,GTGTGTGTGT,GTGTGTGTGTGT,GTGTGTGTGTGTGT,GTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT [Show Flanks]
Chromosome:: 3:150611019 (GRCh38)
3:150328806 (GRCh37)
Canonical SPDI:: NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000003.12:150611004:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GTGTGTGTGTGTGT=0./0 (ALFA)
HGVS:: NC_000003.12:g.150611005GT[7], NC_000003.12:g.150611005GT[8], NC_000003.12:g.150611005GT[9], NC_000003.12:g.150611005GT[10], NC_000003.12:g.150611005GT[11], NC_000003.12:g.150611005GT[12], NC_000003.12:g.150611005GT[13], NC_000003.12:g.150611005GT[14], NC_000003.12:g.150611005GT[15], NC_000003.12:g.150611005GT[17], NC_000003.12:g.150611005GT[18], NC_000003.12:g.150611005GT[19], NC_000003.12:g.150611005GT[20], NC_000003.12:g.150611005GT[21], NC_000003.12:g.150611005GT[22], NC_000003.12:g.150611005GT[23], NC_000003.12:g.150611005GT[24], NC_000003.12:g.150611005GT[25], NC_000003.12:g.150611005GT[26], NC_000003.12:g.150611005GT[27], NC_000003.11:g.150328792GT[7], NC_000003.11:g.150328792GT[8], NC_000003.11:g.150328792GT[9], NC_000003.11:g.150328792GT[10], NC_000003.11:g.150328792GT[11], NC_000003.11:g.150328792GT[12], NC_000003.11:g.150328792GT[13], NC_000003.11:g.150328792GT[14], NC_000003.11:g.150328792GT[15], NC_000003.11:g.150328792GT[17], NC_000003.11:g.150328792GT[18], NC_000003.11:g.150328792GT[19], NC_000003.11:g.150328792GT[20], NC_000003.11:g.150328792GT[21], NC_000003.11:g.150328792GT[22], NC_000003.11:g.150328792GT[23], NC_000003.11:g.150328792GT[24], NC_000003.11:g.150328792GT[25], NC_000003.11:g.150328792GT[26], NC_000003.11:g.150328792GT[27], NG_005531.4:g.1144AC[7], NG_005531.4:g.1144AC[8], NG_005531.4:g.1144AC[9], NG_005531.4:g.1144AC[10], NG_005531.4:g.1144AC[11], NG_005531.4:g.1144AC[12], NG_005531.4:g.1144AC[13], NG_005531.4:g.1144AC[14], NG_005531.4:g.1144AC[15], NG_005531.4:g.1144AC[17], NG_005531.4:g.1144AC[18], NG_005531.4:g.1144AC[19], NG_005531.4:g.1144AC[20], NG_005531.4:g.1144AC[21], NG_005531.4:g.1144AC[22], NG_005531.4:g.1144AC[23], NG_005531.4:g.1144AC[24], NG_005531.4:g.1144AC[25], NG_005531.4:g.1144AC[26], NG_005531.4:g.1144AC[27]

Select item 14914283253.

rs1491428325 has merged into rs78544518 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT,TTTT [Show Flanks]
Chromosome:: 3:150627910 (GRCh38)
3:150345697 (GRCh37)
Canonical SPDI:: NC_000003.12:150627901:TTTTTTTTTT:TTTTTTTT,NC_000003.12:150627901:TTTTTTTTTT:TTTTTTTTT,NC_000003.12:150627901:TTTTTTTTTT:TTTTTTTTTTT,NC_000003.12:150627901:TTTTTTTTTT:TTTTTTTTTTTT
Gene:: SELENOT (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTT=0./0 (ALFA)
-=0.000008/2 (TOPMED)
T=0.00006/1 (TOMMO)
HGVS:: NC_000003.12:g.150627910_150627911del, NC_000003.12:g.150627911del, NC_000003.12:g.150627911dup, NC_000003.12:g.150627910_150627911dup, NC_000003.11:g.150345697_150345698del, NC_000003.11:g.150345698del, NC_000003.11:g.150345698dup, NC_000003.11:g.150345697_150345698dup, NM_016275.5:c.*281_*282del, NM_016275.5:c.*282del, NM_016275.5:c.*282dup, NM_016275.5:c.*281_*282dup, NM_016275.4:c.*281_*282del, NM_016275.4:c.*282del, NM_016275.4:c.*282dup, NM_016275.4:c.*281_*282dup, NM_016275.3:c.*281_*282del, NM_016275.3:c.*282del, NM_016275.3:c.*282dup, NM_016275.3:c.*281_*282dup

Select item 14913142514.

rs1491314251 has merged into rs761458301 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA [Show Flanks]
Chromosome:: 3:150619231 (GRCh38)
3:150337018 (GRCh37)
Canonical SPDI:: NC_000003.12:150619220:AAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000003.12:150619220:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000003.12:150619220:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000003.12:150619220:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000003.12:150619220:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000003.12:150619220:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000003.12:150619220:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000003.12:150619220:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000003.12:150619220:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000003.12:150619220:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAA=0./0 (ALFA)
A=0.425/17 (GENOME_DK)
HGVS:: NC_000003.12:g.150619231_150619238del, NC_000003.12:g.150619233_150619238del, NC_000003.12:g.150619234_150619238del, NC_000003.12:g.150619235_150619238del, NC_000003.12:g.150619236_150619238del, NC_000003.12:g.150619237_150619238del, NC_000003.12:g.150619238del, NC_000003.12:g.150619238dup, NC_000003.12:g.150619237_150619238dup, NC_000003.12:g.150619236_150619238dup, NC_000003.11:g.150337018_150337025del, NC_000003.11:g.150337020_150337025del, NC_000003.11:g.150337021_150337025del, NC_000003.11:g.150337022_150337025del, NC_000003.11:g.150337023_150337025del, NC_000003.11:g.150337024_150337025del, NC_000003.11:g.150337025del, NC_000003.11:g.150337025dup, NC_000003.11:g.150337024_150337025dup, NC_000003.11:g.150337023_150337025dup

Select item 14911293865.

rs1491129386 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 3:150627902 (GRCh38)
3:150345690 (GRCh37)
Canonical SPDI:: NC_000003.12:150627902::G
Gene:: SELENOT (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000184/3 (ALFA)
G=0.000283/5 (TOMMO)
G=0.000446/118 (TOPMED)
G=0.000477/66 (GnomAD)
G=0.000546/1 (Korea1K)
G=0.001093/7 (1000Genomes)
HGVS:: NC_000003.12:g.150627902_150627903insG, NC_000003.11:g.150345689_150345690insG, NM_016275.5:c.*273_*274insG, NM_016275.4:c.*273_*274insG, NM_016275.3:c.*273_*274insG

Select item 14910591866.

rs1491059186 has merged into rs35489270 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 3:150621624 (GRCh38)
3:150339411 (GRCh37)
Canonical SPDI:: NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150621614:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000003.12:g.150621624_150621636del, NC_000003.12:g.150621625_150621636del, NC_000003.12:g.150621626_150621636del, NC_000003.12:g.150621627_150621636del, NC_000003.12:g.150621628_150621636del, NC_000003.12:g.150621629_150621636del, NC_000003.12:g.150621630_150621636del, NC_000003.12:g.150621631_150621636del, NC_000003.12:g.150621632_150621636del, NC_000003.12:g.150621633_150621636del, NC_000003.12:g.150621634_150621636del, NC_000003.12:g.150621635_150621636del, NC_000003.12:g.150621636del, NC_000003.12:g.150621636dup, NC_000003.12:g.150621635_150621636dup, NC_000003.12:g.150621634_150621636dup, NC_000003.12:g.150621633_150621636dup, NC_000003.12:g.150621632_150621636dup, NC_000003.12:g.150621631_150621636dup, NC_000003.12:g.150621630_150621636dup, NC_000003.12:g.150621629_150621636dup, NC_000003.12:g.150621628_150621636dup, NC_000003.12:g.150621627_150621636dup, NC_000003.12:g.150621626_150621636dup, NC_000003.12:g.150621625_150621636dup, NC_000003.12:g.150621620_150621636dup, NC_000003.12:g.150621618_150621636dup, NC_000003.12:g.150621636_150621637insTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.12:g.150621615_150621636T[45]ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000003.12:g.150621636_150621637insTTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.12:g.150621636_150621637insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.12:g.150621636_150621637insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.12:g.150621636_150621637insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.11:g.150339411_150339423del, NC_000003.11:g.150339412_150339423del, NC_000003.11:g.150339413_150339423del, NC_000003.11:g.150339414_150339423del, NC_000003.11:g.150339415_150339423del, NC_000003.11:g.150339416_150339423del, NC_000003.11:g.150339417_150339423del, NC_000003.11:g.150339418_150339423del, NC_000003.11:g.150339419_150339423del, NC_000003.11:g.150339420_150339423del, NC_000003.11:g.150339421_150339423del, NC_000003.11:g.150339422_150339423del, NC_000003.11:g.150339423del, NC_000003.11:g.150339423dup, NC_000003.11:g.150339422_150339423dup, NC_000003.11:g.150339421_150339423dup, NC_000003.11:g.150339420_150339423dup, NC_000003.11:g.150339419_150339423dup, NC_000003.11:g.150339418_150339423dup, NC_000003.11:g.150339417_150339423dup, NC_000003.11:g.150339416_150339423dup, NC_000003.11:g.150339415_150339423dup, NC_000003.11:g.150339414_150339423dup, NC_000003.11:g.150339413_150339423dup, NC_000003.11:g.150339412_150339423dup, NC_000003.11:g.150339407_150339423dup, NC_000003.11:g.150339405_150339423dup, NC_000003.11:g.150339423_150339424insTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.11:g.150339402_150339423T[45]ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000003.11:g.150339423_150339424insTTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.11:g.150339423_150339424insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.11:g.150339423_150339424insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.11:g.150339423_150339424insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 14910510977.

rs1491051097 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 3:150611037 (GRCh38)
3:150328824 (GRCh37)
Canonical SPDI:: NC_000003.12:150611035:TAT:T
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000169/2 (ALFA)
-=0.000079/11 (GnomAD)
HGVS:: NC_000003.12:g.150611037_150611038del, NC_000003.11:g.150328824_150328825del, NG_005531.4:g.1143_1144del

Select item 14910474808.

rs1491047480 has merged into rs34182257 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT,TTTT [Show Flanks]
Chromosome:: 3:150630887 (GRCh38)
3:150348674 (GRCh37)
Canonical SPDI:: NC_000003.12:150630876:TTTTTTTTTTTT:TTTTTTTTTT,NC_000003.12:150630876:TTTTTTTTTTTT:TTTTTTTTTTT,NC_000003.12:150630876:TTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000003.12:150630876:TTTTTTTTTTTT:TTTTTTTTTTTTTT
Gene:: SELENOT (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTT=0.00039/2 (ALFA)
T=0.00025/4 (TOMMO)
T=0.14011/540 (ALSPAC)
T=0.1459/541 (TWINSUK)
T=0.17261/837 (1000Genomes)
HGVS:: NC_000003.12:g.150630887_150630888del, NC_000003.12:g.150630888del, NC_000003.12:g.150630888dup, NC_000003.12:g.150630887_150630888dup, NC_000003.11:g.150348674_150348675del, NC_000003.11:g.150348675del, NC_000003.11:g.150348675dup, NC_000003.11:g.150348674_150348675dup

Select item 14910188369.

rs1491018836 has merged into rs34698339 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTT>-,T,TT,TTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTT [Show Flanks]
Chromosome:: 3:150625884 (GRCh38)
3:150343671 (GRCh37)
Canonical SPDI:: NC_000003.12:150625870:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000003.12:150625870:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000003.12:150625870:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000003.12:150625870:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000003.12:150625870:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000003.12:150625870:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000003.12:150625870:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000003.12:150625870:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150625870:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150625870:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:150625870:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTT=0./0 (ALFA)
-=0.386/1933 (1000Genomes)
HGVS:: NC_000003.12:g.150625884_150625887del, NC_000003.12:g.150625885_150625887del, NC_000003.12:g.150625886_150625887del, NC_000003.12:g.150625887del, NC_000003.12:g.150625887dup, NC_000003.12:g.150625886_150625887dup, NC_000003.12:g.150625885_150625887dup, NC_000003.12:g.150625884_150625887dup, NC_000003.12:g.150625883_150625887dup, NC_000003.12:g.150625882_150625887dup, NC_000003.12:g.150625880_150625887dup, NC_000003.11:g.150343671_150343674del, NC_000003.11:g.150343672_150343674del, NC_000003.11:g.150343673_150343674del, NC_000003.11:g.150343674del, NC_000003.11:g.150343674dup, NC_000003.11:g.150343673_150343674dup, NC_000003.11:g.150343672_150343674dup, NC_000003.11:g.150343671_150343674dup, NC_000003.11:g.150343670_150343674dup, NC_000003.11:g.150343669_150343674dup, NC_000003.11:g.150343667_150343674dup

Select item 149100481510.

rs1491004815 has merged into rs10663245 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>-,CTCT [Show Flanks]
Chromosome:: 3:150623599 (GRCh38)
3:150341386 (GRCh37)
Canonical SPDI:: NC_000003.12:150623592:CTCTCTCT:CTCTCT,NC_000003.12:150623592:CTCTCTCT:CTCTCTCTCT
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTCTCTCT=0.00022/1 (ALFA)
CT=0./0 (ALSPAC)
CT=0./0 (GENOME_DK)
CT=0./0 (GoNL)
CT=0./0 (Korea1K)
CT=0./0 (NorthernSweden)
CT=0./0 (TWINSUK)
CT=0.00022/1 (Estonian)
CT=0.9998/5007 (1000Genomes)
CT=0.99988/16758 (TOMMO)
HGVS:: NC_000003.12:g.150623593CT[3], NC_000003.12:g.150623593CT[5], NC_000003.11:g.150341380CT[3], NC_000003.11:g.150341380CT[5]

Select item 149098954711.

rs1490989547 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 3:150609753 (GRCh38)
3:150327540 (GRCh37)
Canonical SPDI:: NC_000003.12:150609752:C:G
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.150609753C>G, NC_000003.11:g.150327540C>G

Select item 149097416712.

rs1490974167 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:150609385 (GRCh38)
3:150327172 (GRCh37)
Canonical SPDI:: NC_000003.12:150609384:T:C
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000021/3 (GnomAD)
C=0.000283/5 (TOMMO)
C=0.000546/1 (Korea1K)
HGVS:: NC_000003.12:g.150609385T>C, NC_000003.11:g.150327172T>C

Select item 149092998613.

rs1490929986 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:150624525 (GRCh38)
3:150342312 (GRCh37)
Canonical SPDI:: NC_000003.12:150624524:A:G
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.150624525A>G, NC_000003.11:g.150342312A>G

Select item 149038996814.

rs1490389968 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:150615912 (GRCh38)
3:150333699 (GRCh37)
Canonical SPDI:: NC_000003.12:150615911:A:G
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.150615912A>G, NC_000003.11:g.150333699A>G

Select item 149020168815.

rs1490201688 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:150616449 (GRCh38)
3:150334236 (GRCh37)
Canonical SPDI:: NC_000003.12:150616448:C:T
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/2 (GnomAD)
T=0.000312/2 (1000Genomes)
HGVS:: NC_000003.12:g.150616449C>T, NC_000003.11:g.150334236C>T

Select item 149018883316.

rs1490188833 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 3:150605422 (GRCh38)
3:150323209 (GRCh37)
Canonical SPDI:: NC_000003.12:150605421:GGG:GG
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0.000071/1 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000003.12:g.150605424del, NC_000003.11:g.150323211del

Select item 149012797917.

rs1490127979 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:150608419 (GRCh38)
3:150326206 (GRCh37)
Canonical SPDI:: NC_000003.12:150608418:A:G
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000015/4 (TOPMED)
HGVS:: NC_000003.12:g.150608419A>G, NC_000003.11:g.150326206A>G

Select item 149011202418.

rs1490112024 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:150623828 (GRCh38)
3:150341615 (GRCh37)
Canonical SPDI:: NC_000003.12:150623827:T:C
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.150623828T>C, NC_000003.11:g.150341615T>C

Select item 149004403919.

rs1490044039 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 3:150627557 (GRCh38)
3:150345344 (GRCh37)
Canonical SPDI:: NC_000003.12:150627556:G:A,NC_000003.12:150627556:G:T
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000156/1 (1000Genomes)
T=0.000743/12 (TOMMO)
HGVS:: NC_000003.12:g.150627557G>A, NC_000003.12:g.150627557G>T, NC_000003.11:g.150345344G>A, NC_000003.11:g.150345344G>T

Select item 148997050620.

rs1489970506 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:150621767 (GRCh38)
3:150339554 (GRCh37)
Canonical SPDI:: NC_000003.12:150621766:G:A
Gene:: SELENOT (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.150621767G>A, NC_000003.11:g.150339554G>A

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