Links from Gene
Items: 1 to 20 of 1000
2.
rs1491402098 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 2:61043352
(GRCh38)
2:61270488
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61043352::G
- Gene:
- PEX13 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000067/9
(GnomAD)
- HGVS:
3.
rs1491316513 has merged into rs539310122 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 2:61029149
(GRCh38)
2:61256284
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61029139:AAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000002.12:61029139:AAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000002.12:61029139:AAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000002.12:61029139:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000002.12:61029139:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000002.12:61029139:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000002.12:61029139:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000002.12:61029139:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000002.12:61029139:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000002.12:61029139:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000002.12:61029139:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000002.12:61029139:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA
- Gene:
- PEX13 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAA=0./0
(
ALFA)
-=0.348/1743
(1000Genomes)
- HGVS:
NC_000002.12:g.61029149_61029155del, NC_000002.12:g.61029150_61029155del, NC_000002.12:g.61029151_61029155del, NC_000002.12:g.61029152_61029155del, NC_000002.12:g.61029153_61029155del, NC_000002.12:g.61029154_61029155del, NC_000002.12:g.61029155del, NC_000002.12:g.61029155dup, NC_000002.12:g.61029154_61029155dup, NC_000002.12:g.61029153_61029155dup, NC_000002.12:g.61029152_61029155dup, NC_000002.12:g.61029150_61029155dup, NC_000002.11:g.61256284_61256290del, NC_000002.11:g.61256285_61256290del, NC_000002.11:g.61256286_61256290del, NC_000002.11:g.61256287_61256290del, NC_000002.11:g.61256288_61256290del, NC_000002.11:g.61256289_61256290del, NC_000002.11:g.61256290del, NC_000002.11:g.61256290dup, NC_000002.11:g.61256289_61256290dup, NC_000002.11:g.61256288_61256290dup, NC_000002.11:g.61256287_61256290dup, NC_000002.11:g.61256285_61256290dup, NG_008665.1:g.16473_16479del, NG_008665.1:g.16474_16479del, NG_008665.1:g.16475_16479del, NG_008665.1:g.16476_16479del, NG_008665.1:g.16477_16479del, NG_008665.1:g.16478_16479del, NG_008665.1:g.16479del, NG_008665.1:g.16479dup, NG_008665.1:g.16478_16479dup, NG_008665.1:g.16477_16479dup, NG_008665.1:g.16476_16479dup, NG_008665.1:g.16474_16479dup
4.
rs1491300246 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AT>-
[Show Flanks]
- Chromosome:
- 2:61029761
(GRCh38)
2:61256896
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61029759:TAT:T
- Gene:
- PEX13 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0.000071/1
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
5.
rs1491192526 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->A
[Show Flanks]
- Chromosome:
- 2:61029760
(GRCh38)
2:61256896
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61029760:A:AA
- Gene:
- PEX13 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AA=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
A=0.000011/3
(TOPMED)
- HGVS:
7.
rs1491100591 has merged into rs70959888 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CACACACACACACA>-,CA,CACA,CACACA,CACACACA,CACACACACA,CACACACACACA,CACACACACACACACA,CACACACACACACACACA,CACACACACACACACACACA,CACACACACACACACACACACA,CACACACACACACACACACACACA,CACACACACACACACACACACACACA,CACACACACACACACACACACACACACA
[Show Flanks]
- Chromosome:
- 2:61023416
(GRCh38)
2:61250551
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACA
- Gene:
- PEX13 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ACACACACACACACA=0./0
(
ALFA)
-=0.000015/4
(TOPMED)
AC=0.3/12
(GENOME_DK)
- HGVS:
NC_000002.12:g.61023404CA[6], NC_000002.12:g.61023404CA[7], NC_000002.12:g.61023404CA[8], NC_000002.12:g.61023404CA[9], NC_000002.12:g.61023404CA[10], NC_000002.12:g.61023404CA[11], NC_000002.12:g.61023404CA[12], NC_000002.12:g.61023404CA[14], NC_000002.12:g.61023404CA[15], NC_000002.12:g.61023404CA[16], NC_000002.12:g.61023404CA[17], NC_000002.12:g.61023404CA[18], NC_000002.12:g.61023404CA[19], NC_000002.12:g.61023404CA[20], NC_000002.11:g.61250539CA[6], NC_000002.11:g.61250539CA[7], NC_000002.11:g.61250539CA[8], NC_000002.11:g.61250539CA[9], NC_000002.11:g.61250539CA[10], NC_000002.11:g.61250539CA[11], NC_000002.11:g.61250539CA[12], NC_000002.11:g.61250539CA[14], NC_000002.11:g.61250539CA[15], NC_000002.11:g.61250539CA[16], NC_000002.11:g.61250539CA[17], NC_000002.11:g.61250539CA[18], NC_000002.11:g.61250539CA[19], NC_000002.11:g.61250539CA[20], NG_008665.1:g.10728CA[6], NG_008665.1:g.10728CA[7], NG_008665.1:g.10728CA[8], NG_008665.1:g.10728CA[9], NG_008665.1:g.10728CA[10], NG_008665.1:g.10728CA[11], NG_008665.1:g.10728CA[12], NG_008665.1:g.10728CA[14], NG_008665.1:g.10728CA[15], NG_008665.1:g.10728CA[16], NG_008665.1:g.10728CA[17], NG_008665.1:g.10728CA[18], NG_008665.1:g.10728CA[19], NG_008665.1:g.10728CA[20]
9.
rs1490955582 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 2:61025032
(GRCh38)
2:61252167
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61025031:C:T
- Gene:
- PEX13 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000023/6
(TOPMED)
T=0.000684/2
(KOREAN)
- HGVS:
10.
rs1490848880 has merged into rs70959888 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CACACACACACACA>-,CA,CACA,CACACA,CACACACA,CACACACACA,CACACACACACA,CACACACACACACACA,CACACACACACACACACA,CACACACACACACACACACA,CACACACACACACACACACACA,CACACACACACACACACACACACA,CACACACACACACACACACACACACA,CACACACACACACACACACACACACACA
[Show Flanks]
- Chromosome:
- 2:61023416
(GRCh38)
2:61250551
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACA,NC_000002.12:61023402:ACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACA
- Gene:
- PEX13 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ACACACACACACACA=0./0
(
ALFA)
-=0.000015/4
(TOPMED)
AC=0.3/12
(GENOME_DK)
- HGVS:
NC_000002.12:g.61023404CA[6], NC_000002.12:g.61023404CA[7], NC_000002.12:g.61023404CA[8], NC_000002.12:g.61023404CA[9], NC_000002.12:g.61023404CA[10], NC_000002.12:g.61023404CA[11], NC_000002.12:g.61023404CA[12], NC_000002.12:g.61023404CA[14], NC_000002.12:g.61023404CA[15], NC_000002.12:g.61023404CA[16], NC_000002.12:g.61023404CA[17], NC_000002.12:g.61023404CA[18], NC_000002.12:g.61023404CA[19], NC_000002.12:g.61023404CA[20], NC_000002.11:g.61250539CA[6], NC_000002.11:g.61250539CA[7], NC_000002.11:g.61250539CA[8], NC_000002.11:g.61250539CA[9], NC_000002.11:g.61250539CA[10], NC_000002.11:g.61250539CA[11], NC_000002.11:g.61250539CA[12], NC_000002.11:g.61250539CA[14], NC_000002.11:g.61250539CA[15], NC_000002.11:g.61250539CA[16], NC_000002.11:g.61250539CA[17], NC_000002.11:g.61250539CA[18], NC_000002.11:g.61250539CA[19], NC_000002.11:g.61250539CA[20], NG_008665.1:g.10728CA[6], NG_008665.1:g.10728CA[7], NG_008665.1:g.10728CA[8], NG_008665.1:g.10728CA[9], NG_008665.1:g.10728CA[10], NG_008665.1:g.10728CA[11], NG_008665.1:g.10728CA[12], NG_008665.1:g.10728CA[14], NG_008665.1:g.10728CA[15], NG_008665.1:g.10728CA[16], NG_008665.1:g.10728CA[17], NG_008665.1:g.10728CA[18], NG_008665.1:g.10728CA[19], NG_008665.1:g.10728CA[20]
11.
rs1490755713 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 2:61017533
(GRCh38)
2:61244668
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61017532:G:A
- Gene:
- PEX13 (Varview), PUS10 (Varview)
- Functional Consequence:
- upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0.000071/1
(
ALFA)
A=0.000004/1
(TOPMED)
- HGVS:
12.
rs1490721255 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 2:61017409
(GRCh38)
2:61244544
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61017408:G:A
- Gene:
- PEX13 (Varview), PUS10 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant,5_prime_UTR_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000071/1
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
13.
rs1490609091 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 2:61017596
(GRCh38)
2:61244731
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61017595:G:A
- Gene:
- PEX13 (Varview), PUS10 (Varview)
- Functional Consequence:
- upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000019/5
(TOPMED)
A=0.000029/4
(GnomAD)
- HGVS:
14.
rs1490541707 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 2:61052369
(GRCh38)
2:61279504
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61052368:C:T
- Gene:
- PEX13 (Varview)
- Functional Consequence:
- 500B_downstream_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0.000084/1
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
15.
rs1490397310 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- G>-
[Show Flanks]
- Chromosome:
- 2:61044794
(GRCh38)
2:61271929
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61044793:G:
- Gene:
- PEX13 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000021/3
(GnomAD)
-=0.00003/8
(TOPMED)
- HGVS:
16.
rs1490315947 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 2:61019064
(GRCh38)
2:61246199
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61019063:C:G
- Gene:
- PEX13 (Varview), PUS10 (Varview)
- Functional Consequence:
- upstream_transcript_variant,intron_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS:
17.
rs1490280975 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 2:61018164
(GRCh38)
2:61245299
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61018163:T:C
- Gene:
- PEX13 (Varview), PUS10 (Varview)
- Functional Consequence:
- upstream_transcript_variant,intron_variant,5_prime_UTR_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.00034/1
(KOREAN)
- HGVS:
NC_000002.12:g.61018164T>C, NC_000002.11:g.61245299T>C, NG_008665.1:g.5488T>C, XM_011532568.4:c.-219A>G, XM_011532568.3:c.-219A>G, XM_011532568.2:c.-219A>G, NM_144709.4:c.-172A>G, NM_144709.3:c.-172A>G, NM_144709.2:c.-172A>G, XM_011532574.4:c.-41A>G, XM_011532574.3:c.-41A>G, XM_011532574.2:c.-41A>G, XM_011532574.1:c.-41A>G, XM_017003428.3:c.-172A>G, XM_017003428.2:c.-172A>G, XM_017003428.1:c.-172A>G, XM_024452720.2:c.-296A>G, XM_024452720.1:c.-296A>G, XM_047443481.1:c.-296A>G, NM_001322127.1:c.-779A>G
18.
rs1490143192 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C,G
[Show Flanks]
- Chromosome:
- 2:61027101
(GRCh38)
2:61254236
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61027100:T:C,NC_000002.12:61027100:T:G
- Gene:
- PEX13 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
- HGVS:
19.
rs1490088645 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CTCAT>-
[Show Flanks]
- Chromosome:
- 2:61032541
(GRCh38)
2:61259676
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61032538:ATCTCAT:AT
- Gene:
- PEX13 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
AT=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
20.
rs1490081832 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C
[Show Flanks]
- Chromosome:
- 2:61048599
(GRCh38)
2:61275734
(GRCh37)
- Canonical SPDI:
- NC_000002.12:61048598:A:C
- Gene:
- PEX13 (Varview)
- Functional Consequence:
- missense_variant,coding_sequence_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0.000071/1
(
ALFA)
C=0.000007/1
(GnomAD)
C=0.000008/2
(GnomAD_exomes)
- HGVS: