Links from Gene
Items: 1 to 20 of 1000
1.
rs1491573978 has merged into rs11322366 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TT>-,T,TTT
[Show Flanks]
- Chromosome:
- 2:68208937
(GRCh38)
2:68436069
(GRCh37)
- Canonical SPDI:
- NC_000002.12:68208927:TTTTTTTTTTT:TTTTTTTTT,NC_000002.12:68208927:TTTTTTTTTTT:TTTTTTTTTT,NC_000002.12:68208927:TTTTTTTTTTT:TTTTTTTTTTTT
- Gene:
- PPP3R1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTT=0.00775/43
(
ALFA)
T=0.23063/1155
(1000Genomes)
T=0.33567/335
(GoNL)
T=0.35/14
(GENOME_DK)
T=0.40949/6863
(TOMMO)
- HGVS:
2.
rs1491570683 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 2:68198510
(GRCh38)
2:68425642
(GRCh37)
- Canonical SPDI:
- NC_000002.12:68198508:ACA:A
- Gene:
- PPP3R1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by cluster
- MAF:
-=0.000079/11
(GnomAD)
-=0.000354/6
(TOMMO)
-=0.000546/1
(Korea1K)
- HGVS:
3.
rs1491555380 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 2:68249300
(GRCh38)
2:68476433
(GRCh37)
- Canonical SPDI:
- NC_000002.12:68249300::G
- Gene:
- PPP3R1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0.000071/1
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS:
5.
rs1491513355 has merged into rs200143942 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ATAT>-,AT,ATATAT
[Show Flanks]
- Chromosome:
- 2:68198190
(GRCh38)
2:68425322
(GRCh37)
- Canonical SPDI:
- NC_000002.12:68198185:ATATATAT:ATAT,NC_000002.12:68198185:ATATATAT:ATATAT,NC_000002.12:68198185:ATATATAT:ATATATATAT
- Gene:
- PPP3R1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ATATAT=0./0
(
ALFA)
-=0.00027/1
(TWINSUK)
-=0.00334/56
(TOMMO)
- HGVS:
6.
rs1491469599 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 2:68182675
(GRCh38)
2:68409808
(GRCh37)
- Canonical SPDI:
- NC_000002.12:68182675:G:GG
- Gene:
- PPP3R1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GG=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000008/1
(GnomAD)
- HGVS:
7.
rs1491437318 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ATAT>-,AT,ATATAT,ATATATAT,ATATATATAT,ATATATATATAT,ATATATTCTGATATATATATATAT,ATATATTCTGATATATATATATATATAT,ATATGCTGATATATATATATAT,ATATTCTGATATATATATATAT,ATATTCTGATATATATATATATAT,ATATTCTGATATATATATATATATAT,ATATTCTGATATATATATATATATATAT,ATATTCTGATATATATATATATATATATAT,ATATTCTGATATATATATATTCTGATATATATATATAT,ATATTCTTATATATATATATAT,ATATTCTTATATATATATATATAT,ATATTGATATATATATATAT
[Show Flanks]
- Chromosome:
- 2:68204362
(GRCh38)
2:68431494
(GRCh37)
- Canonical SPDI:
- NC_000002.12:68204353:ATATATATATAT:ATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATATTCTGATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATATTCTGATATATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATGCTGATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATTCTGATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATTCTGATATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATTCTGATATATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATTCTGATATATATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATTCTGATATATATATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATTCTGATATATATATATTCTGATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATTCTTATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATTCTTATATATATATATATAT,NC_000002.12:68204353:ATATATATATAT:ATATATATATATTGATATATATATATAT
- Gene:
- PPP3R1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ATATATATAT=0./0
(
ALFA)
-=0.347/1738
(1000Genomes)
-=0.3483/209
(NorthernSweden)
- HGVS:
NC_000002.12:g.68204354AT[4], NC_000002.12:g.68204354AT[5], NC_000002.12:g.68204354AT[7], NC_000002.12:g.68204354AT[8], NC_000002.12:g.68204354AT[9], NC_000002.12:g.68204354AT[10], NC_000002.12:g.68204354_68204365AT[7]TCTGATATATATATATAT[1], NC_000002.12:g.68204354_68204365AT[7]TCTGATATATATATATATATAT[1], NC_000002.12:g.68204354_68204365AT[6]GCTGATATATATATATAT[1], NC_000002.12:g.68204354_68204365AT[6]TCTGATATATATATATAT[1], NC_000002.12:g.68204354_68204365AT[6]TCTGATATATATATATATAT[1], NC_000002.12:g.68204354_68204365AT[6]TCTGATATATATATATATATAT[1], NC_000002.12:g.68204354_68204365AT[6]TCTGATATATATATATATATATAT[1], NC_000002.12:g.68204354_68204365AT[6]TCTGATATATATATATATATATATAT[1], NC_000002.12:g.68204354_68204365ATATATATATATTCTG[2]AT[7], NC_000002.12:g.68204354_68204365AT[6]TCTTATATATATATATAT[1], NC_000002.12:g.68204354_68204365AT[6]TCTTATATATATATATATAT[1], NC_000002.12:g.68204354_68204365AT[6]TGATATATATATATAT[1], NC_000002.11:g.68431486AT[4], NC_000002.11:g.68431486AT[5], NC_000002.11:g.68431486AT[7], NC_000002.11:g.68431486AT[8], NC_000002.11:g.68431486AT[9], NC_000002.11:g.68431486AT[10], NC_000002.11:g.68431486_68431497AT[7]TCTGATATATATATATAT[1], NC_000002.11:g.68431486_68431497AT[7]TCTGATATATATATATATATAT[1], NC_000002.11:g.68431486_68431497AT[6]GCTGATATATATATATAT[1], NC_000002.11:g.68431486_68431497AT[6]TCTGATATATATATATAT[1], NC_000002.11:g.68431486_68431497AT[6]TCTGATATATATATATATAT[1], NC_000002.11:g.68431486_68431497AT[6]TCTGATATATATATATATATAT[1], NC_000002.11:g.68431486_68431497AT[6]TCTGATATATATATATATATATAT[1], NC_000002.11:g.68431486_68431497AT[6]TCTGATATATATATATATATATATAT[1], NC_000002.11:g.68431486_68431497ATATATATATATTCTG[2]AT[7], NC_000002.11:g.68431486_68431497AT[6]TCTTATATATATATATAT[1], NC_000002.11:g.68431486_68431497AT[6]TCTTATATATATATATATAT[1], NC_000002.11:g.68431486_68431497AT[6]TGATATATATATATAT[1]
8.
rs1491434151 has merged into rs34117344 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 2:68190268
(GRCh38)
2:68417400
(GRCh37)
- Canonical SPDI:
- NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:68190255:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- PPP3R1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAA=0./0
(
ALFA)
- HGVS:
NC_000002.12:g.68190268_68190282del, NC_000002.12:g.68190269_68190282del, NC_000002.12:g.68190270_68190282del, NC_000002.12:g.68190271_68190282del, NC_000002.12:g.68190272_68190282del, NC_000002.12:g.68190273_68190282del, NC_000002.12:g.68190274_68190282del, NC_000002.12:g.68190275_68190282del, NC_000002.12:g.68190276_68190282del, NC_000002.12:g.68190277_68190282del, NC_000002.12:g.68190278_68190282del, NC_000002.12:g.68190279_68190282del, NC_000002.12:g.68190280_68190282del, NC_000002.12:g.68190281_68190282del, NC_000002.12:g.68190282del, NC_000002.12:g.68190282dup, NC_000002.12:g.68190281_68190282dup, NC_000002.12:g.68190280_68190282dup, NC_000002.12:g.68190279_68190282dup, NC_000002.11:g.68417400_68417414del, NC_000002.11:g.68417401_68417414del, NC_000002.11:g.68417402_68417414del, NC_000002.11:g.68417403_68417414del, NC_000002.11:g.68417404_68417414del, NC_000002.11:g.68417405_68417414del, NC_000002.11:g.68417406_68417414del, NC_000002.11:g.68417407_68417414del, NC_000002.11:g.68417408_68417414del, NC_000002.11:g.68417409_68417414del, NC_000002.11:g.68417410_68417414del, NC_000002.11:g.68417411_68417414del, NC_000002.11:g.68417412_68417414del, NC_000002.11:g.68417413_68417414del, NC_000002.11:g.68417414del, NC_000002.11:g.68417414dup, NC_000002.11:g.68417413_68417414dup, NC_000002.11:g.68417412_68417414dup, NC_000002.11:g.68417411_68417414dup
10.
rs1491387666 has merged into rs1553407218 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GAGA>-,GA,GAGAGA,GAGAGAGA
[Show Flanks]
- Chromosome:
- 2:68217045
(GRCh38)
2:68444177
(GRCh37)
- Canonical SPDI:
- NC_000002.12:68217039:AGAGAGAGA:AGAGA,NC_000002.12:68217039:AGAGAGAGA:AGAGAGA,NC_000002.12:68217039:AGAGAGAGA:AGAGAGAGAGA,NC_000002.12:68217039:AGAGAGAGA:AGAGAGAGAGAGA
- Gene:
- PPP3R1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AGAGAGA=0./0
(
ALFA)
-=0.000026/7
(TOPMED)
-=0.263671/3028
(GoESP)
- HGVS:
13.
rs1491354683 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AA>-
[Show Flanks]
- Chromosome:
- 2:68198185
(GRCh38)
2:68425317
(GRCh37)
- Canonical SPDI:
- NC_000002.12:68198184:AA:
- Gene:
- PPP3R1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000015/2
(GnomAD)
-=0.000035/1
(TOMMO)
- HGVS:
14.
rs1491341103 has merged into rs200145582 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CCCC>-,C,CC,CCC,CCCCC,CCCCCC,CCCCCCC,CCCCCCCC,CCCCCCCCC,CCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCCCCCCCCC
[Show Flanks]
- Chromosome:
- 2:68182076
(GRCh38)
2:68409208
(GRCh37)
- Canonical SPDI:
- NC_000002.12:68182071:CCCCCCCC:CCCC,NC_000002.12:68182071:CCCCCCCC:CCCCC,NC_000002.12:68182071:CCCCCCCC:CCCCCC,NC_000002.12:68182071:CCCCCCCC:CCCCCCC,NC_000002.12:68182071:CCCCCCCC:CCCCCCCCC,NC_000002.12:68182071:CCCCCCCC:CCCCCCCCCC,NC_000002.12:68182071:CCCCCCCC:CCCCCCCCCCC,NC_000002.12:68182071:CCCCCCCC:CCCCCCCCCCCC,NC_000002.12:68182071:CCCCCCCC:CCCCCCCCCCCCC,NC_000002.12:68182071:CCCCCCCC:CCCCCCCCCCCCCCCCCCC,NC_000002.12:68182071:CCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCC,NC_000002.12:68182071:CCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCC,NC_000002.12:68182071:CCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCCC,NC_000002.12:68182071:CCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCCCCC,NC_000002.12:68182071:CCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
- Gene:
- PPP3R1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000002.12:g.68182076_68182079del, NC_000002.12:g.68182077_68182079del, NC_000002.12:g.68182078_68182079del, NC_000002.12:g.68182079del, NC_000002.12:g.68182079dup, NC_000002.12:g.68182078_68182079dup, NC_000002.12:g.68182077_68182079dup, NC_000002.12:g.68182076_68182079dup, NC_000002.12:g.68182075_68182079dup, NC_000002.12:g.68182079_68182080insCCCCCCCCCCC, NC_000002.12:g.68182079_68182080insCCCCCCCCCCCCCCC, NC_000002.12:g.68182079_68182080insCCCCCCCCCCCCCCCCC, NC_000002.12:g.68182079_68182080insCCCCCCCCCCCCCCCCCC, NC_000002.12:g.68182079_68182080insCCCCCCCCCCCCCCCCCCCC, NC_000002.12:g.68182079_68182080insCCCCCCCCCCCCCCCCCCCCCC, NC_000002.11:g.68409208_68409211del, NC_000002.11:g.68409209_68409211del, NC_000002.11:g.68409210_68409211del, NC_000002.11:g.68409211del, NC_000002.11:g.68409211dup, NC_000002.11:g.68409210_68409211dup, NC_000002.11:g.68409209_68409211dup, NC_000002.11:g.68409208_68409211dup, NC_000002.11:g.68409207_68409211dup, NC_000002.11:g.68409211_68409212insCCCCCCCCCCC, NC_000002.11:g.68409211_68409212insCCCCCCCCCCCCCCC, NC_000002.11:g.68409211_68409212insCCCCCCCCCCCCCCCCC, NC_000002.11:g.68409211_68409212insCCCCCCCCCCCCCCCCCC, NC_000002.11:g.68409211_68409212insCCCCCCCCCCCCCCCCCCCC, NC_000002.11:g.68409211_68409212insCCCCCCCCCCCCCCCCCCCCCC
15.
rs1491328649 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GA>-
[Show Flanks]
- Chromosome:
- 2:68182676
(GRCh38)
2:68409808
(GRCh37)
- Canonical SPDI:
- NC_000002.12:68182674:AGA:A
- Gene:
- PPP3R1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
-=0.00035/10
(TOMMO)
- HGVS:
17.
rs1491256982 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->CA
[Show Flanks]
- Chromosome:
- 2:68198062
(GRCh38)
2:68425195
(GRCh37)
- Canonical SPDI:
- NC_000002.12:68198062::CA
- Gene:
- PPP3R1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CA=0./0
(
ALFA)
CA=0.000004/1
(TOPMED)
CA=0.000025/1
(GnomAD)
- HGVS:
19.
rs1491242255 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GT>-
[Show Flanks]
- Chromosome:
- 2:68204378
(GRCh38)
2:68431510
(GRCh37)
- Canonical SPDI:
- NC_000002.12:68204376:TGT:T
- Gene:
- PPP3R1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
-=0.000007/1
(GnomAD)
-=0.000008/2
(TOPMED)
- HGVS:
20.
rs1491217501 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GT>-,GTGT
[Show Flanks]
- Chromosome:
- 2:68198439
(GRCh38)
2:68425571
(GRCh37)
- Canonical SPDI:
- NC_000002.12:68198434:GTGTGT:GTGT,NC_000002.12:68198434:GTGTGT:GTGTGTGT
- Gene:
- PPP3R1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
GTGTGTGT=0./0
(
ALFA)
-=0.000033/4
(GnomAD)
- HGVS: