SNP Links for Gene (Select 55854) - SNP

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Items: 1 to 20 of 1000

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Select item 14915032971.

rs1491503297 [Homo sapiens]

Variant type:: DELINS
Alleles:: TC>- [Show Flanks]
Chromosome:: 2:186508009 (GRCh38)
2:187372736 (GRCh37)
Canonical SPDI:: NC_000002.12:186508004:TCTCTC:TCTC
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TCTC=0./0 (ALFA)
-=0.000008/2 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.186508005TC[2], NC_000002.11:g.187372732TC[2]

Select item 14913492962.

rs1491349296 [Homo sapiens]

Variant type:: INS
Alleles:: ->GTTT [Show Flanks]
Chromosome:: 2:186505062 (GRCh38)
2:187369790 (GRCh37)
Canonical SPDI:: NC_000002.12:186505062::GTTT
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000002.12:g.186505062_186505063insGTTT, NC_000002.11:g.187369789_187369790insGTTT

Select item 14912817983.

rs1491281798 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 2:186508005 (GRCh38)
2:187372733 (GRCh37)
Canonical SPDI:: NC_000002.12:186508005:C:CC
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CC=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.186508006dup, NC_000002.11:g.187372733dup

Select item 14912722594.

rs1491272259 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 2:186497062 (GRCh38)
2:187361789 (GRCh37)
Canonical SPDI:: NC_000002.12:186497061:CT:
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000021/3 (GnomAD)
-=0.000023/6 (TOPMED)
HGVS:: NC_000002.12:g.186497062_186497063del, NC_000002.11:g.187361789_187361790del

Select item 14911401295.

rs1491140129 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 2:186501526 (GRCh38)
2:187366253 (GRCh37)
Canonical SPDI:: NC_000002.12:186501525:CT:
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000002.12:g.186501526_186501527del, NC_000002.11:g.187366253_187366254del

Select item 14907770216.

rs1490777021 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:186501246 (GRCh38)
2:187365973 (GRCh37)
Canonical SPDI:: NC_000002.12:186501245:A:G
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000002.12:g.186501246A>G, NC_000002.11:g.187365973A>G

Select item 14907409817.

rs1490740981 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:186498849 (GRCh38)
2:187363576 (GRCh37)
Canonical SPDI:: NC_000002.12:186498848:C:T
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: T=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.186498849C>T, NC_000002.11:g.187363576C>T

Select item 14904305028.

rs1490430502 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:186507852 (GRCh38)
2:187372579 (GRCh37)
Canonical SPDI:: NC_000002.12:186507851:A:G
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.186507852A>G, NC_000002.11:g.187372579A>G

Select item 14904010759.

rs1490401075 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 2:186499684 (GRCh38)
2:187364411 (GRCh37)
Canonical SPDI:: NC_000002.12:186499683:A:T
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00001/1 (GnomAD_exomes)
T=0.000011/3 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000002.12:g.186499684A>T, NC_000002.11:g.187364411A>T

Select item 149037702210.

rs1490377022 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 2:186491498 (GRCh38)
2:187356225 (GRCh37)
Canonical SPDI:: NC_000002.12:186491497:G:T
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.186491498G>T, NC_000002.11:g.187356225G>T

Select item 148972160211.

rs1489721602 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:186496377 (GRCh38)
2:187361104 (GRCh37)
Canonical SPDI:: NC_000002.12:186496376:C:T
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.186496377C>T, NC_000002.11:g.187361104C>T

Select item 148961553812.

rs1489615538 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:186501324 (GRCh38)
2:187366051 (GRCh37)
Canonical SPDI:: NC_000002.12:186501323:C:T
Gene:: ZC3H15 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000002.12:g.186501324C>T, NC_000002.11:g.187366051C>T, NM_018471.3:c.341C>T, NM_018471.2:c.341C>T, NP_060941.2:p.Thr114Ile

Select item 148956741313.

rs1489567413 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:186486595 (GRCh38)
2:187351322 (GRCh37)
Canonical SPDI:: NC_000002.12:186486594:C:T
Gene:: ZC3H15 (Varview), LOC105373785 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/1 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000002.12:g.186486595C>T, NC_000002.11:g.187351322C>T

Select item 148956534314.

rs1489565343 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 2:186486741 (GRCh38)
2:187351469 (GRCh37)
Canonical SPDI:: NC_000002.12:186486741:TTTT:TTTTT
Gene:: ZC3H15 (Varview), LOC105373785 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: TTTTT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.186486745dup, NC_000002.11:g.187351472dup

Select item 148948880115.

rs1489488801 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:186486523 (GRCh38)
2:187351250 (GRCh37)
Canonical SPDI:: NC_000002.12:186486522:C:T
Gene:: ZC3H15 (Varview), LOC105373785 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.186486523C>T, NC_000002.11:g.187351250C>T

Select item 148934949216.

rs1489349492 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:186492828 (GRCh38)
2:187357555 (GRCh37)
Canonical SPDI:: NC_000002.12:186492827:A:G
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000064/9 (GnomAD)
HGVS:: NC_000002.12:g.186492828A>G, NC_000002.11:g.187357555A>G

Select item 148931980517.

rs1489319805 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 2:186498302 (GRCh38)
2:187363029 (GRCh37)
Canonical SPDI:: NC_000002.12:186498301:G:T
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.186498302G>T, NC_000002.11:g.187363029G>T

Select item 148883550818.

rs1488835508 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:186485641 (GRCh38)
2:187350368 (GRCh37)
Canonical SPDI:: NC_000002.12:186485640:A:G
Gene:: ZC3H15 (Varview), LOC105373785 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000002.12:g.186485641A>G, NC_000002.11:g.187350368A>G

Select item 148881676819.

rs1488816768 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:186494961 (GRCh38)
2:187359688 (GRCh37)
Canonical SPDI:: NC_000002.12:186494960:T:C
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.186494961T>C, NC_000002.11:g.187359688T>C

Select item 148871554920.

rs1488715549 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:186494069 (GRCh38)
2:187358796 (GRCh37)
Canonical SPDI:: NC_000002.12:186494068:T:C
Gene:: ZC3H15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.186494069T>C, NC_000002.11:g.187358796T>C

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