SNP Links for Gene (Select 56339) - SNP

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Items: 1 to 20 of 3832

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Select item 14911889611.

rs1491188961 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>- [Show Flanks]
Chromosome:: 14:21500371 (GRCh38)
14:21968513 (GRCh37)
Canonical SPDI:: NC_000014.9:21500369:AGA:A
Gene:: METTL3 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.0145/172 (ALFA)
-=0.000991/17 (TOMMO)
-=0.003821/7 (Korea1K)
-=0.019758/2468 (GnomAD)
HGVS:: NC_000014.9:g.21500371_21500372del, NC_000014.8:g.21968513_21968514del

Select item 14908441522.

rs1490844152 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:21502072 (GRCh38)
14:21970213 (GRCh37)
Canonical SPDI:: NC_000014.9:21502071:G:A
Gene:: METTL3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000008/1 (GnomAD)
HGVS:: NC_000014.9:g.21502072G>A, NC_000014.8:g.21970213G>A

Select item 14908124663.

rs1490812466 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 14:21509686 (GRCh38)
14:21977828 (GRCh37)
Canonical SPDI:: NC_000014.9:21509685:G:C
Gene:: METTL3 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.21509686G>C, NC_000014.8:g.21977828G>C

Select item 14906157654.

rs1490615765 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:21509127 (GRCh38)
14:21977269 (GRCh37)
Canonical SPDI:: NC_000014.9:21509126:C:T
Gene:: METTL3 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.21509127C>T, NC_000014.8:g.21977269C>T

Select item 14904851035.

rs1490485103 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:21498982 (GRCh38)
14:21967126 (GRCh37)
Canonical SPDI:: NC_000014.9:21498981:A:G
Gene:: TOX4 (Varview), METTL3 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0.000111/1 (ALFA)
G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000014.9:g.21498982A>G, NC_000014.8:g.21967126A>G, NM_014828.4:c.*2376A>G, NM_014828.3:c.*2376A>G, NM_014828.2:c.*2362A>G, NM_001303523.2:c.*2376A>G, NM_001303523.1:c.*2376A>G

Select item 14903514636.

rs1490351463 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 14:21513099 (GRCh38)
14:21981250 (GRCh37)
Canonical SPDI:: NC_000014.9:21513098:T:C,NC_000014.9:21513098:T:G
Gene:: METTL3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.21513099T>C, NC_000014.9:g.21513099T>G, NC_000014.8:g.21981250T>C, NC_000014.8:g.21981250T>G

Select item 14900407987.

rs1490040798 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 14:21502582 (GRCh38)
14:21970723 (GRCh37)
Canonical SPDI:: NC_000014.9:21502581:G:A,NC_000014.9:21502581:G:C,NC_000014.9:21502581:G:T
Gene:: METTL3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.21502582G>A, NC_000014.9:g.21502582G>C, NC_000014.9:g.21502582G>T, NC_000014.8:g.21970723G>A, NC_000014.8:g.21970723G>C, NC_000014.8:g.21970723G>T

Select item 14899235388.

rs1489923538 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:21504237 (GRCh38)
14:21972380 (GRCh37)
Canonical SPDI:: NC_000014.9:21504236:T:C
Gene:: METTL3 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.21504237T>C, NC_000014.8:g.21972380T>C

Select item 14886250269.

rs1488625026 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:21507112 (GRCh38)
14:21975254 (GRCh37)
Canonical SPDI:: NC_000014.9:21507111:C:T
Gene:: METTL3 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.00007/1 (ALFA)
HGVS:: NC_000014.9:g.21507112C>T, NC_000014.8:g.21975254C>T

Select item 148857454410.

rs1488574544 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 14:21508088 (GRCh38)
14:21976230 (GRCh37)
Canonical SPDI:: NC_000014.9:21508087:C:G,NC_000014.9:21508087:C:T
Gene:: METTL3 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000007/1 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000014.9:g.21508088C>G, NC_000014.9:g.21508088C>T, NC_000014.8:g.21976230C>G, NC_000014.8:g.21976230C>T

Select item 148792092511.

rs1487920925 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 14:21511442 (GRCh38)
14:21979584 (GRCh37)
Canonical SPDI:: NC_000014.9:21511441:T:A,NC_000014.9:21511441:T:G
Gene:: METTL3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000026/7 (TOPMED)
G=0.001638/3 (Korea1K)
HGVS:: NC_000014.9:g.21511442T>A, NC_000014.9:g.21511442T>G, NC_000014.8:g.21979584T>A, NC_000014.8:g.21979584T>G

Select item 148788766612.

rs1487887666 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 14:21508850 (GRCh38)
14:21976992 (GRCh37)
Canonical SPDI:: NC_000014.9:21508849:C:A,NC_000014.9:21508849:C:T
Gene:: METTL3 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00005/7 (GnomAD)
T=0.000546/1 (Korea1K)
HGVS:: NC_000014.9:g.21508850C>A, NC_000014.9:g.21508850C>T, NC_000014.8:g.21976992C>A, NC_000014.8:g.21976992C>T

Select item 148770651613.

rs1487706516 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 14:21512223 (GRCh38)
14:21980373 (GRCh37)
Canonical SPDI:: NC_000014.9:21512222:G:A,NC_000014.9:21512222:G:C,NC_000014.9:21512222:G:T
Gene:: METTL3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000014.9:g.21512223G>A, NC_000014.9:g.21512223G>C, NC_000014.9:g.21512223G>T, NC_000014.8:g.21980373G>A, NC_000014.8:g.21980373G>C, NC_000014.8:g.21980373G>T

Select item 148758598814.

rs1487585988 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 14:21511804 (GRCh38)
14:21979946 (GRCh37)
Canonical SPDI:: NC_000014.9:21511803:A:
Gene:: METTL3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.21511804del, NC_000014.8:g.21979946del

Select item 148737878815.

rs1487378788 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:21512600 (GRCh38)
14:21980750 (GRCh37)
Canonical SPDI:: NC_000014.9:21512599:G:A
Gene:: METTL3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.21512600G>A, NC_000014.8:g.21980750G>A

Select item 148704092816.

rs1487040928 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:21506850 (GRCh38)
14:21974992 (GRCh37)
Canonical SPDI:: NC_000014.9:21506849:T:C
Gene:: METTL3 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.21506850T>C, NC_000014.8:g.21974992T>C

Select item 148689140917.

rs1486891409 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:21497877 (GRCh38)
14:21966021 (GRCh37)
Canonical SPDI:: NC_000014.9:21497876:C:T
Gene:: TOX4 (Varview), METTL3 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.21497877C>T, NC_000014.8:g.21966021C>T, NM_014828.4:c.*1271C>T, NM_014828.3:c.*1271C>T, NM_014828.2:c.*1257C>T, NM_001303523.2:c.*1271C>T, NM_001303523.1:c.*1271C>T

Select item 148623088918.

rs1486230889 [Homo sapiens]

Variant type:: DEL
Alleles:: C>- [Show Flanks]
Chromosome:: 14:21498500 (GRCh38)
14:21966644 (GRCh37)
Canonical SPDI:: NC_000014.9:21498499:C:
Gene:: TOX4 (Varview), METTL3 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency
MAF:: -=0.000128/18 (GnomAD)
HGVS:: NC_000014.9:g.21498500del, NC_000014.8:g.21966644del, NM_014828.4:c.*1894del, NM_014828.3:c.*1894del, NM_014828.2:c.*1880del, NM_001303523.2:c.*1894del, NM_001303523.1:c.*1894del

Select item 148610037819.

rs1486100378 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 14:21505903 (GRCh38)
14:21974045 (GRCh37)
Canonical SPDI:: NC_000014.9:21505902:A:T
Gene:: METTL3 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.21505903A>T, NC_000014.8:g.21974045A>T

Select item 148604057420.

rs1486040574 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:21505653 (GRCh38)
14:21973795 (GRCh37)
Canonical SPDI:: NC_000014.9:21505652:G:A
Gene:: METTL3 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.001119/5 (ALFA)
A=0.000029/4 (GnomAD)
A=0.001116/5 (Estonian)
HGVS:: NC_000014.9:g.21505653G>A, NC_000014.8:g.21973795G>A

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