SNP Links for Gene (Select 56917) - SNP

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Select item 14915766361.

rs1491576636 has merged into rs148696106 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAGAGAGAGA>-,GA,GAGA,GAGAGA,GAGAGAGA,GAGAGAGAGAGA,GAGAGAGAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGAGAGA,GAGAGAGAGAGACAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGA,GAGAGAGAGAGAGAGA [Show Flanks]
Chromosome:: 19:47420527 (GRCh38)
19:47923784 (GRCh37)
Canonical SPDI:: NC_000019.10:47420521:AGAGAGAGAGAGAGA:AGAGA,NC_000019.10:47420521:AGAGAGAGAGAGAGA:AGAGAGA,NC_000019.10:47420521:AGAGAGAGAGAGAGA:AGAGAGAGA,NC_000019.10:47420521:AGAGAGAGAGAGAGA:AGAGAGAGAGA,NC_000019.10:47420521:AGAGAGAGAGAGAGA:AGAGAGAGAGAGA,NC_000019.10:47420521:AGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGA,NC_000019.10:47420521:AGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGAGAGA,NC_000019.10:47420521:AGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGACAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGAGAGA,NC_000019.10:47420521:AGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGA,NC_000019.10:47420521:AGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGA
Gene:: MEIS3 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGAGAGA=0./0 (ALFA)
AGAGAG=0.000023/6 (TOPMED)
-=0.00589/22 (1000Genomes)
-=0.050337/194 (ALSPAC)
HGVS:: NC_000019.10:g.47420523GA[2], NC_000019.10:g.47420523GA[3], NC_000019.10:g.47420523GA[4], NC_000019.10:g.47420523GA[5], NC_000019.10:g.47420523GA[6], NC_000019.10:g.47420523GA[8], NC_000019.10:g.47420522_47420536AG[8]ACAGACGCGGGTGGGAGGAGAGAGAGAGAGAGA[1], NC_000019.10:g.47420522_47420536AG[8]ACAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGAGAGA[1], NC_000019.10:g.47420523GA[9], NC_000019.10:g.47420523GA[10], NC_000019.9:g.47923780GA[2], NC_000019.9:g.47923780GA[3], NC_000019.9:g.47923780GA[4], NC_000019.9:g.47923780GA[5], NC_000019.9:g.47923780GA[6], NC_000019.9:g.47923780GA[8], NC_000019.9:g.47923779_47923793AG[8]ACAGACGCGGGTGGGAGGAGAGAGAGAGAGAGA[1], NC_000019.9:g.47923779_47923793AG[8]ACAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGAGAGA[1], NC_000019.9:g.47923780GA[9], NC_000019.9:g.47923780GA[10], NG_051644.1:g.6699CT[2], NG_051644.1:g.6699CT[3], NG_051644.1:g.6699CT[4], NG_051644.1:g.6699CT[5], NG_051644.1:g.6699CT[6], NG_051644.1:g.6699CT[8], NG_051644.1:g.6698_6712TC[8]CTCCCACCCGCGTCTGTCTCTCTCTCTCTCTCT[1], NG_051644.1:g.6698_6712TC[8]CTCCCACCCGCGTCTGTCTCTGTCTCTCTCTCTCTCTCT[1], NG_051644.1:g.6699CT[9], NG_051644.1:g.6699CT[10]

Select item 14915583862.

rs1491558386 [Homo sapiens]

Variant type:: DELINS
Alleles:: AC>- [Show Flanks]
Chromosome:: 19:47409600 (GRCh38)
19:47912857 (GRCh37)
Canonical SPDI:: NC_000019.10:47409598:CAC:C
Gene:: MEIS3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: -=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.47409600_47409601del, NC_000019.9:g.47912857_47912858del, NG_051644.1:g.17634_17635del

Select item 14913432143.

rs1491343214 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->CCT
Chromosome:: no mapping
Canonical SPDI:

Select item 14912796134.

rs1491279613 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CAGACGCGGGTGGGAGGAGAGAGAGAGA,CAGACGCGGGTGGGAGGAGAGAGAGAGAGACAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGA,CAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGA,CAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGACAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGA [Show Flanks]
Chromosome:: 19:47420522 (GRCh38)
19:47923780 (GRCh37)
Canonical SPDI:: NC_000019.10:47420522:GAGAGAGAGAGA:GAGAGAGAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGA,NC_000019.10:47420522:GAGAGAGAGAGA:GAGAGAGAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGAGACAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGA,NC_000019.10:47420522:GAGAGAGAGAGA:GAGAGAGAGAGACAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGA,NC_000019.10:47420522:GAGAGAGAGAGA:GAGAGAGAGAGACAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGACAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGA
Gene:: MEIS3 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GAGAGAGAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGA=0./0 (ALFA)
HGVS:: NC_000019.10:g.47420523_47420534GA[6]CAGACGCGGGTGGGAGGAGAGAGAGAGA[1], NC_000019.10:g.47420523_47420534GA[6]CAGACGCGGGTGGGAGGAGAGAGAGAGAGACAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGA[1], NC_000019.10:g.47420523_47420534GA[6]CAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGA[1], NC_000019.10:g.47420534_47420535insCAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGACAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGA, NC_000019.9:g.47923780_47923791GA[6]CAGACGCGGGTGGGAGGAGAGAGAGAGA[1], NC_000019.9:g.47923780_47923791GA[6]CAGACGCGGGTGGGAGGAGAGAGAGAGAGACAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGA[1], NC_000019.9:g.47923780_47923791GA[6]CAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGA[1], NC_000019.9:g.47923791_47923792insCAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGACAGAGACAGACGCGGGTGGGAGGAGAGAGAGAGA, NG_051644.1:g.6700_6711TC[6]CTCCCACCCGCGTCTGTCTCTCTCTCTC[1], NG_051644.1:g.6700_6711TC[6]CTCCCACCCGCGTCTGTCTCTGTCTCTCTCTCTCTCCTCCCACCCGCGTCTGTCTCTCTCTCTC[1], NG_051644.1:g.6700_6711TC[6]CTCCCACCCGCGTCTGTCTCTGTCTCTCTCTCTC[1], NG_051644.1:g.6711_6712insCTCCCACCCGCGTCTGTCTCTGTCTCTCTCTCTCCTCCCACCCGCGTCTGTCTCTGTCTCTCTCTCTC

Select item 14911414305.

rs1491141430 has merged into rs147025798 [Homo sapiens]

Variant type:: DELINS
Alleles:: TCTCTCTC>-,TC,TCTC,TCTCTC,TCTCTCTCTC,TCTCTCTCTCTC,TCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTC [Show Flanks]
Chromosome:: 19:47420904 (GRCh38)
19:47924161 (GRCh37)
Canonical SPDI:: NC_000019.10:47420892:CTCTCTCTCTCTCTCTCTC:CTCTCTCTCTC,NC_000019.10:47420892:CTCTCTCTCTCTCTCTCTC:CTCTCTCTCTCTC,NC_000019.10:47420892:CTCTCTCTCTCTCTCTCTC:CTCTCTCTCTCTCTC,NC_000019.10:47420892:CTCTCTCTCTCTCTCTCTC:CTCTCTCTCTCTCTCTC,NC_000019.10:47420892:CTCTCTCTCTCTCTCTCTC:CTCTCTCTCTCTCTCTCTCTC,NC_000019.10:47420892:CTCTCTCTCTCTCTCTCTC:CTCTCTCTCTCTCTCTCTCTCTC,NC_000019.10:47420892:CTCTCTCTCTCTCTCTCTC:CTCTCTCTCTCTCTCTCTCTCTCTC,NC_000019.10:47420892:CTCTCTCTCTCTCTCTCTC:CTCTCTCTCTCTCTCTCTCTCTCTCTCTC
Gene:: MEIS3 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTCTCTCTCTCTCTCTCTCTCTCTC=0./0 (ALFA)
HGVS:: NC_000019.10:g.47420894TC[5], NC_000019.10:g.47420894TC[6], NC_000019.10:g.47420894TC[7], NC_000019.10:g.47420894TC[8], NC_000019.10:g.47420894TC[10], NC_000019.10:g.47420894TC[11], NC_000019.10:g.47420894TC[12], NC_000019.10:g.47420894TC[14], NC_000019.9:g.47924151TC[5], NC_000019.9:g.47924151TC[6], NC_000019.9:g.47924151TC[7], NC_000019.9:g.47924151TC[8], NC_000019.9:g.47924151TC[10], NC_000019.9:g.47924151TC[11], NC_000019.9:g.47924151TC[12], NC_000019.9:g.47924151TC[14], NG_051644.1:g.6324AG[5], NG_051644.1:g.6324AG[6], NG_051644.1:g.6324AG[7], NG_051644.1:g.6324AG[8], NG_051644.1:g.6324AG[10], NG_051644.1:g.6324AG[11], NG_051644.1:g.6324AG[12], NG_051644.1:g.6324AG[14]

Select item 14911394946.

rs1491139494 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 19:47409599 (GRCh38)
19:47912857 (GRCh37)
Canonical SPDI:: NC_000019.10:47409599:A:AA
Gene:: MEIS3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.47409600dup, NC_000019.9:g.47912857dup, NG_051644.1:g.17634dup

Select item 14911282777.

rs1491128277 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CA [Show Flanks]
Chromosome:: 19:47420587 (GRCh38)
19:47923845 (GRCh37)
Canonical SPDI:: NC_000019.10:47420587:A:ACA
Gene:: MEIS3 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: ACA=0./0 (ALFA)
AC=0.0003/8 (GnomAD)
HGVS:: NC_000019.10:g.47420588_47420589insCA, NC_000019.9:g.47923845_47923846insCA, NG_051644.1:g.6646_6647insGT

Select item 14911145948.

rs1491114594 [Homo sapiens]

Variant type:: INS
Alleles:: ->TCACAG [Show Flanks]
Chromosome:: 19:47420911 (GRCh38)
19:47924169 (GRCh37)
Canonical SPDI:: NC_000019.10:47420911::TCACAG
Gene:: MEIS3 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TCACAG=0./0 (ALFA)
TCACAG=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.47420911_47420912insTCACAG, NC_000019.9:g.47924168_47924169insTCACAG, NG_051644.1:g.6322_6323insCTGTGA

Select item 14911018799.

rs1491101879 [Homo sapiens]

Variant type:: DEL
Alleles:: TT>- [Show Flanks]
Chromosome:: 19:47420974 (GRCh38)
19:47924231 (GRCh37)
Canonical SPDI:: NC_000019.10:47420973:TT:
Gene:: MEIS3 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.0811/962 (ALFA)
-=0.22562/21798 (GnomAD)
-=0.37416/223 (NorthernSweden)
-=0.49342/8233 (TOMMO)
HGVS:: NC_000019.10:g.47420974_47420975del, NC_000019.9:g.47924231_47924232del, NG_051644.1:g.6259_6260del

Select item 149106446010.

rs1491064460 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: 19:47422711 (GRCh38)
19:47925968 (GRCh37)
Canonical SPDI:: NC_000019.10:47422710:AT:
Gene:: MEIS3 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0.000367/6 (ALFA)
-=0.000024/3 (GnomAD)
HGVS:: NC_000019.10:g.47422711_47422712del, NC_000019.9:g.47925968_47925969del, NG_051644.1:g.4522_4523del

Select item 149101789811.

rs1491017898 has merged into rs71180840 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTCTCTCTCTCTCTCT>-,CT,CTCT,CTCTCT,CTCTCTCT,CTCTCTCTCT,CTCTCTCTCTCT,CTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT [Show Flanks]
Chromosome:: 19:47420959 (GRCh38)
19:47924216 (GRCh37)
Canonical SPDI:: NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,NC_000019.10:47420940:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT:CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
Gene:: MEIS3 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTCTCTCTCTCTCTCTCTCT=0./0 (ALFA)
-=0.01369/384 (TOMMO)
HGVS:: NC_000019.10:g.47420941CT[9], NC_000019.10:g.47420941CT[10], NC_000019.10:g.47420941CT[11], NC_000019.10:g.47420941CT[12], NC_000019.10:g.47420941CT[13], NC_000019.10:g.47420941CT[14], NC_000019.10:g.47420941CT[15], NC_000019.10:g.47420941CT[16], NC_000019.10:g.47420941CT[18], NC_000019.10:g.47420941CT[19], NC_000019.10:g.47420941CT[20], NC_000019.10:g.47420941CT[21], NC_000019.10:g.47420941CT[22], NC_000019.10:g.47420941CT[23], NC_000019.10:g.47420941CT[24], NC_000019.10:g.47420941CT[25], NC_000019.10:g.47420941CT[26], NC_000019.10:g.47420941CT[27], NC_000019.10:g.47420941CT[28], NC_000019.9:g.47924198CT[9], NC_000019.9:g.47924198CT[10], NC_000019.9:g.47924198CT[11], NC_000019.9:g.47924198CT[12], NC_000019.9:g.47924198CT[13], NC_000019.9:g.47924198CT[14], NC_000019.9:g.47924198CT[15], NC_000019.9:g.47924198CT[16], NC_000019.9:g.47924198CT[18], NC_000019.9:g.47924198CT[19], NC_000019.9:g.47924198CT[20], NC_000019.9:g.47924198CT[21], NC_000019.9:g.47924198CT[22], NC_000019.9:g.47924198CT[23], NC_000019.9:g.47924198CT[24], NC_000019.9:g.47924198CT[25], NC_000019.9:g.47924198CT[26], NC_000019.9:g.47924198CT[27], NC_000019.9:g.47924198CT[28], NG_051644.1:g.6260AG[9], NG_051644.1:g.6260AG[10], NG_051644.1:g.6260AG[11], NG_051644.1:g.6260AG[12], NG_051644.1:g.6260AG[13], NG_051644.1:g.6260AG[14], NG_051644.1:g.6260AG[15], NG_051644.1:g.6260AG[16], NG_051644.1:g.6260AG[18], NG_051644.1:g.6260AG[19], NG_051644.1:g.6260AG[20], NG_051644.1:g.6260AG[21], NG_051644.1:g.6260AG[22], NG_051644.1:g.6260AG[23], NG_051644.1:g.6260AG[24], NG_051644.1:g.6260AG[25], NG_051644.1:g.6260AG[26], NG_051644.1:g.6260AG[27], NG_051644.1:g.6260AG[28]

Select item 149092146012.

rs1490921460 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 19:47420894 (GRCh38)
19:47924151 (GRCh37)
Canonical SPDI:: NC_000019.10:47420893:T:G
Gene:: MEIS3 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000019.10:g.47420894T>G, NC_000019.9:g.47924151T>G, NG_051644.1:g.6340A>C

Select item 149081061113.

rs1490810611 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 19:47414711 (GRCh38)
19:47917968 (GRCh37)
Canonical SPDI:: NC_000019.10:47414710:G:A,NC_000019.10:47414710:G:T
Gene:: MEIS3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000169/2 (ALFA)
T=0.000005/1 (GnomAD_exomes)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000019.10:g.47414711G>A, NC_000019.10:g.47414711G>T, NC_000019.9:g.47917968G>A, NC_000019.9:g.47917968G>T, NG_051644.1:g.12523C>T, NG_051644.1:g.12523C>A

Select item 149067883414.

rs1490678834 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:47415624 (GRCh38)
19:47918881 (GRCh37)
Canonical SPDI:: NC_000019.10:47415623:A:G
Gene:: MEIS3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000019.10:g.47415624A>G, NC_000019.9:g.47918881A>G, NG_051644.1:g.11610T>C

Select item 149023850215.

rs1490238502 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAGA>- [Show Flanks]
Chromosome:: 19:47415210 (GRCh38)
19:47918467 (GRCh37)
Canonical SPDI:: NC_000019.10:47415206:AGAAAGA:AGA
Gene:: MEIS3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGA=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000015/4 (TOPMED)
HGVS:: NC_000019.10:g.47415210_47415213del, NC_000019.9:g.47918467_47918470del, NG_051644.1:g.12024_12027del

Select item 149018766916.

rs1490187669 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:47416020 (GRCh38)
19:47919277 (GRCh37)
Canonical SPDI:: NC_000019.10:47416019:T:C
Gene:: MEIS3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000019.10:g.47416020T>C, NC_000019.9:g.47919277T>C, NG_051644.1:g.11214A>G

Select item 149017540917.

rs1490175409 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 19:47413746 (GRCh38)
19:47917003 (GRCh37)
Canonical SPDI:: NC_000019.10:47413745:G:C,NC_000019.10:47413745:G:T
Gene:: MEIS3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.001297/21 (ALFA)
C=0.000011/3 (TOPMED)
T=0.044925/131 (KOREAN)
HGVS:: NC_000019.10:g.47413746G>C, NC_000019.10:g.47413746G>T, NC_000019.9:g.47917003G>C, NC_000019.9:g.47917003G>T, NG_051644.1:g.13488C>G, NG_051644.1:g.13488C>A

Select item 149006051918.

rs1490060519 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:47411830 (GRCh38)
19:47915087 (GRCh37)
Canonical SPDI:: NC_000019.10:47411829:G:A
Gene:: MEIS3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000214/3 (ALFA)
A=0.000072/10 (GnomAD)
A=0.000094/25 (TOPMED)
A=0.000342/1 (KOREAN)
A=0.000546/1 (Korea1K)
HGVS:: NC_000019.10:g.47411830G>A, NC_000019.9:g.47915087G>A, NG_051644.1:g.15404C>T

Select item 148994115219.

rs1489941152 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:47420974 (GRCh38)
19:47924231 (GRCh37)
Canonical SPDI:: NC_000019.10:47420973:T:C
Gene:: MEIS3 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.00042/5 (ALFA)
C=0.00001/1 (GnomAD)
HGVS:: NC_000019.10:g.47420974T>C, NC_000019.9:g.47924231T>C, NG_051644.1:g.6260A>G

Select item 148985241220.

rs1489852412 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 19:47406921 (GRCh38)
19:47910178 (GRCh37)
Canonical SPDI:: NC_000019.10:47406920:C:G,NC_000019.10:47406920:C:T
Gene:: MEIS3 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.47406921C>G, NC_000019.10:g.47406921C>T, NC_000019.9:g.47910178C>G, NC_000019.9:g.47910178C>T, NG_051644.1:g.20313G>C, NG_051644.1:g.20313G>A, NM_020160.3:c.1183G>C, NM_020160.3:c.1183G>A, NM_020160.2:c.1183G>C, NM_020160.2:c.1183G>A, NM_001009813.3:c.994G>C, NM_001009813.3:c.994G>A, NM_001009813.2:c.994G>C, NM_001009813.2:c.994G>A, NM_001301059.2:c.1045G>C, NM_001301059.2:c.1045G>A, NM_001301059.1:c.1045G>C, NM_001301059.1:c.1045G>A, NM_001346148.2:c.1036G>C, NM_001346148.2:c.1036G>A, NM_001346148.1:c.1036G>C, NM_001346148.1:c.1036G>A, XM_011527136.4:c.1258G>C, XM_011527136.4:c.1258G>A, XM_011527136.3:c.1258G>C, XM_011527136.3:c.1258G>A, XM_011527136.2:c.1258G>C, XM_011527136.2:c.1258G>A, XM_011527136.1:c.1258G>C, XM_011527136.1:c.1258G>A, XM_017027011.2:c.1309G>C, XM_017027011.2:c.1309G>A, XM_017027011.1:c.1309G>C, XM_017027011.1:c.1309G>A, XM_024451617.2:c.787G>C, XM_024451617.2:c.787G>A, XM_024451617.1:c.787G>C, XM_024451617.1:c.787G>A, XM_024451612.2:c.1447G>C, XM_024451612.2:c.1447G>A, XM_024451612.1:c.1447G>C, XM_024451612.1:c.1447G>A, XM_024451613.2:c.1396G>C, XM_024451613.2:c.1396G>A, XM_024451613.1:c.1396G>C, XM_024451613.1:c.1396G>A, XM_024451616.2:c.1132G>C, XM_024451616.2:c.1132G>A, XM_024451616.1:c.1132G>C, XM_024451616.1:c.1132G>A, XM_024451615.2:c.1174G>C, XM_024451615.2:c.1174G>A, XM_024451615.1:c.1174G>C, XM_024451615.1:c.1174G>A, XM_047439109.1:c.1447G>C, XM_047439109.1:c.1447G>A, NP_064545.1:p.Glu395Gln, NP_064545.1:p.Glu395Lys, NP_001009813.1:p.Glu332Gln, NP_001009813.1:p.Glu332Lys, NP_001287988.1:p.Glu349Gln, NP_001287988.1:p.Glu349Lys, NP_001333077.1:p.Glu346Gln, NP_001333077.1:p.Glu346Lys, XP_011525438.1:p.Glu420Gln, XP_011525438.1:p.Glu420Lys, XP_016882500.1:p.Glu437Gln, XP_016882500.1:p.Glu437Lys, XP_024307385.1:p.Glu263Gln, XP_024307385.1:p.Glu263Lys, XP_024307380.1:p.Glu483Gln, XP_024307380.1:p.Glu483Lys, XP_024307381.1:p.Glu466Gln, XP_024307381.1:p.Glu466Lys, XP_024307384.1:p.Glu378Gln, XP_024307384.1:p.Glu378Lys, XP_024307383.1:p.Glu392Gln, XP_024307383.1:p.Glu392Lys, XP_047295065.1:p.Glu483Gln, XP_047295065.1:p.Glu483Lys

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