SNP Links for Gene (Select 56944) - SNP

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Select item 14901534781.

rs1490153478 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:113980524 (GRCh38)
1:114523146 (GRCh37)
Canonical SPDI:: NC_000001.11:113980523:G:A
Gene:: OLFML3 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.113980524G>A, NC_000001.10:g.114523146G>A, NG_053036.1:g.6134G>A, NM_020190.5:c.307G>A, NM_020190.4:c.307G>A, NM_020190.3:c.307G>A, NM_020190.2:c.307G>A, NM_001286352.3:c.247G>A, NM_001286352.2:c.247G>A, NM_001286352.1:c.247G>A, NM_001286353.3:c.124G>A, NM_001286353.2:c.124G>A, NM_001286353.1:c.124G>A, XM_017001848.3:c.247G>A, XM_017001848.2:c.247G>A, XM_017001848.1:c.247G>A, NP_064575.1:p.Ala103Thr, NP_001273281.1:p.Ala83Thr, NP_001273282.1:p.Ala42Thr, XP_016857337.1:p.Ala83Thr

Select item 14895074612.

rs1489507461 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:113982503 (GRCh38)
1:114525125 (GRCh37)
Canonical SPDI:: NC_000001.11:113982502:A:G
Gene:: OLFML3 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.113982503A>G, NC_000001.10:g.114525125A>G, NG_053036.1:g.8113A>G

Select item 14890786513.

rs1489078651 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:113981522 (GRCh38)
1:114524144 (GRCh37)
Canonical SPDI:: NC_000001.11:113981521:T:A
Gene:: OLFML3 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.113981522T>A, NC_000001.10:g.114524144T>A, NG_053036.1:g.7132T>A, NM_020190.5:c.974T>A, NM_020190.4:c.974T>A, NM_020190.3:c.974T>A, NM_020190.2:c.974T>A, NM_001286352.3:c.914T>A, NM_001286352.2:c.914T>A, NM_001286352.1:c.914T>A, NM_001286353.3:c.791T>A, NM_001286353.2:c.791T>A, NM_001286353.1:c.791T>A, XM_017001848.3:c.914T>A, XM_017001848.2:c.914T>A, XM_017001848.1:c.914T>A, NP_064575.1:p.Phe325Tyr, NP_001273281.1:p.Phe305Tyr, NP_001273282.1:p.Phe264Tyr, XP_016857337.1:p.Phe305Tyr

Select item 14887717684.

rs1488771768 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 1:113978373 (GRCh38)
1:114520995 (GRCh37)
Canonical SPDI:: NC_000001.11:113978372:GGG:GG
Gene:: OLFML3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0.000071/1 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.113978375del, NC_000001.10:g.114520997del, NG_053036.1:g.3985del

Select item 14886998635.

rs1488699863 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:113981902 (GRCh38)
1:114524524 (GRCh37)
Canonical SPDI:: NC_000001.11:113981901:A:G
Gene:: OLFML3 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.113981902A>G, NC_000001.10:g.114524524A>G, NG_053036.1:g.7512A>G, NM_020190.5:c.*133A>G, NM_020190.4:c.*133A>G, NM_020190.3:c.*133A>G, NM_020190.2:c.*133A>G, NM_001286352.3:c.*133A>G, NM_001286352.2:c.*133A>G, NM_001286352.1:c.*133A>G, NM_001286353.3:c.*133A>G, NM_001286353.2:c.*133A>G, NM_001286353.1:c.*133A>G, XM_017001848.3:c.*133A>G, XM_017001848.2:c.*133A>G, XM_017001848.1:c.*133A>G

Select item 14881848116.

rs1488184811 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:113978620 (GRCh38)
1:114521242 (GRCh37)
Canonical SPDI:: NC_000001.11:113978619:C:G
Gene:: OLFML3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000224/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000223/1 (Estonian)
HGVS:: NC_000001.11:g.113978620C>G, NC_000001.10:g.114521242C>G, NG_053036.1:g.4230C>G

Select item 14880934807.

rs1488093480 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:113981028 (GRCh38)
1:114523650 (GRCh37)
Canonical SPDI:: NC_000001.11:113981027:G:A
Gene:: OLFML3 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.113981028G>A, NC_000001.10:g.114523650G>A, NG_053036.1:g.6638G>A, NM_020190.5:c.480G>A, NM_020190.4:c.480G>A, NM_020190.3:c.480G>A, NM_020190.2:c.480G>A, NM_001286352.3:c.420G>A, NM_001286352.2:c.420G>A, NM_001286352.1:c.420G>A, NM_001286353.3:c.297G>A, NM_001286353.2:c.297G>A, NM_001286353.1:c.297G>A, XM_017001848.3:c.420G>A, XM_017001848.2:c.420G>A, XM_017001848.1:c.420G>A

Select item 14879797788.

rs1487979778 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 1:113979926 (GRCh38)
1:114522549 (GRCh37)
Canonical SPDI:: NC_000001.11:113979926:G:GG
Gene:: OLFML3 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
G=0.000312/2 (1000Genomes)
HGVS:: NC_000001.11:g.113979927dup, NC_000001.10:g.114522549dup, NG_053036.1:g.5537dup, XM_017001848.3:c.-146dup, XM_017001848.2:c.-146dup, XM_017001848.1:c.-146dup

Select item 14874569909.

rs1487456990 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:113980238 (GRCh38)
1:114522860 (GRCh37)
Canonical SPDI:: NC_000001.11:113980237:C:T
Gene:: OLFML3 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.113980238C>T, NC_000001.10:g.114522860C>T, NG_053036.1:g.5848C>T, NM_001286353.3:c.-163C>T, NM_001286353.2:c.-163C>T, NM_001286353.1:c.-163C>T

Select item 148721246010.

rs1487212460 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 1:113980116 (GRCh38)
1:114522738 (GRCh37)
Canonical SPDI:: NC_000001.11:113980115:A:C,NC_000001.11:113980115:A:G
Gene:: OLFML3 (Varview)
Functional Consequence:: intron_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
C=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.113980116A>C, NC_000001.11:g.113980116A>G, NC_000001.10:g.114522738A>C, NC_000001.10:g.114522738A>G, NG_053036.1:g.5726A>C, NG_053036.1:g.5726A>G, NM_001286352.3:c.44A>C, NM_001286352.3:c.44A>G, NM_001286352.2:c.44A>C, NM_001286352.2:c.44A>G, NM_001286352.1:c.44A>C, NM_001286352.1:c.44A>G, XM_017001848.3:c.44A>C, XM_017001848.3:c.44A>G, XM_017001848.2:c.44A>C, XM_017001848.2:c.44A>G, XM_017001848.1:c.44A>C, XM_017001848.1:c.44A>G, NP_001273281.1:p.His15Pro, NP_001273281.1:p.His15Arg, XP_016857337.1:p.His15Pro, XP_016857337.1:p.His15Arg

Select item 148713764911.

rs1487137649 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:113979219 (GRCh38)
1:114521841 (GRCh37)
Canonical SPDI:: NC_000001.11:113979218:G:A
Gene:: OLFML3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.113979219G>A, NC_000001.10:g.114521841G>A, NG_053036.1:g.4829G>A

Select item 148709724412.

rs1487097244 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:113981921 (GRCh38)
1:114524543 (GRCh37)
Canonical SPDI:: NC_000001.11:113981920:C:T
Gene:: OLFML3 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.113981921C>T, NC_000001.10:g.114524543C>T, NG_053036.1:g.7531C>T, NM_020190.5:c.*152C>T, NM_020190.4:c.*152C>T, NM_020190.3:c.*152C>T, NM_020190.2:c.*152C>T, NM_001286352.3:c.*152C>T, NM_001286352.2:c.*152C>T, NM_001286352.1:c.*152C>T, NM_001286353.3:c.*152C>T, NM_001286353.2:c.*152C>T, NM_001286353.1:c.*152C>T, XM_017001848.3:c.*152C>T, XM_017001848.2:c.*152C>T, XM_017001848.1:c.*152C>T

Select item 148680186013.

rs1486801860 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:113979353 (GRCh38)
1:114521975 (GRCh37)
Canonical SPDI:: NC_000001.11:113979352:G:A,NC_000001.11:113979352:G:T
Gene:: OLFML3 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.113979353G>A, NC_000001.11:g.113979353G>T, NC_000001.10:g.114521975G>A, NC_000001.10:g.114521975G>T, NG_053036.1:g.4963G>A, NG_053036.1:g.4963G>T

Select item 148638427714.

rs1486384277 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 1:113981190 (GRCh38)
1:114523812 (GRCh37)
Canonical SPDI:: NC_000001.11:113981189:A:C,NC_000001.11:113981189:A:G
Gene:: OLFML3 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.113981190A>C, NC_000001.11:g.113981190A>G, NC_000001.10:g.114523812A>C, NC_000001.10:g.114523812A>G, NG_053036.1:g.6800A>C, NG_053036.1:g.6800A>G, NM_020190.5:c.642A>C, NM_020190.5:c.642A>G, NM_020190.4:c.642A>C, NM_020190.4:c.642A>G, NM_020190.3:c.642A>C, NM_020190.3:c.642A>G, NM_020190.2:c.642A>C, NM_020190.2:c.642A>G, NM_001286352.3:c.582A>C, NM_001286352.3:c.582A>G, NM_001286352.2:c.582A>C, NM_001286352.2:c.582A>G, NM_001286352.1:c.582A>C, NM_001286352.1:c.582A>G, NM_001286353.3:c.459A>C, NM_001286353.3:c.459A>G, NM_001286353.2:c.459A>C, NM_001286353.2:c.459A>G, NM_001286353.1:c.459A>C, NM_001286353.1:c.459A>G, XM_017001848.3:c.582A>C, XM_017001848.3:c.582A>G, XM_017001848.2:c.582A>C, XM_017001848.2:c.582A>G, XM_017001848.1:c.582A>C, XM_017001848.1:c.582A>G

Select item 148573687615.

rs1485736876 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 1:113980307 (GRCh38)
1:114522929 (GRCh37)
Canonical SPDI:: NC_000001.11:113980306:C:G,NC_000001.11:113980306:C:T
Gene:: OLFML3 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.113980307C>G, NC_000001.11:g.113980307C>T, NC_000001.10:g.114522929C>G, NC_000001.10:g.114522929C>T, NG_053036.1:g.5917C>G, NG_053036.1:g.5917C>T, NM_001286353.3:c.-94C>G, NM_001286353.3:c.-94C>T, NM_001286353.2:c.-94C>G, NM_001286353.2:c.-94C>T, NM_001286353.1:c.-94C>G, NM_001286353.1:c.-94C>T

Select item 148566573016.

rs1485665730 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:113981288 (GRCh38)
1:114523910 (GRCh37)
Canonical SPDI:: NC_000001.11:113981287:C:G
Gene:: OLFML3 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.113981288C>G, NC_000001.10:g.114523910C>G, NG_053036.1:g.6898C>G, NM_020190.5:c.740C>G, NM_020190.4:c.740C>G, NM_020190.3:c.740C>G, NM_020190.2:c.740C>G, NM_001286352.3:c.680C>G, NM_001286352.2:c.680C>G, NM_001286352.1:c.680C>G, NM_001286353.3:c.557C>G, NM_001286353.2:c.557C>G, NM_001286353.1:c.557C>G, XM_017001848.3:c.680C>G, XM_017001848.2:c.680C>G, XM_017001848.1:c.680C>G, NP_064575.1:p.Ala247Gly, NP_001273281.1:p.Ala227Gly, NP_001273282.1:p.Ala186Gly, XP_016857337.1:p.Ala227Gly

Select item 148527688917.

rs1485276889 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 1:113980397 (GRCh38)
1:114523019 (GRCh37)
Canonical SPDI:: NC_000001.11:113980396:C:G,NC_000001.11:113980396:C:T
Gene:: OLFML3 (Varview)
Functional Consequence:: synonymous_variant,missense_variant,5_prime_UTR_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.113980397C>G, NC_000001.11:g.113980397C>T, NC_000001.10:g.114523019C>G, NC_000001.10:g.114523019C>T, NG_053036.1:g.6007C>G, NG_053036.1:g.6007C>T, NM_020190.5:c.180C>G, NM_020190.5:c.180C>T, NM_020190.4:c.180C>G, NM_020190.4:c.180C>T, NM_020190.3:c.180C>G, NM_020190.3:c.180C>T, NM_020190.2:c.180C>G, NM_020190.2:c.180C>T, NM_001286352.3:c.120C>G, NM_001286352.3:c.120C>T, NM_001286352.2:c.120C>G, NM_001286352.2:c.120C>T, NM_001286352.1:c.120C>G, NM_001286352.1:c.120C>T, NM_001286353.3:c.-4C>G, NM_001286353.3:c.-4C>T, NM_001286353.2:c.-4C>G, NM_001286353.2:c.-4C>T, NM_001286353.1:c.-4C>G, NM_001286353.1:c.-4C>T, XM_017001848.3:c.120C>G, XM_017001848.3:c.120C>T, XM_017001848.2:c.120C>G, XM_017001848.2:c.120C>T, XM_017001848.1:c.120C>G, XM_017001848.1:c.120C>T, NP_064575.1:p.Asn60Lys, NP_001273281.1:p.Asn40Lys, XP_016857337.1:p.Asn40Lys

Select item 148477542818.

rs1484775428 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:113982674 (GRCh38)
1:114525296 (GRCh37)
Canonical SPDI:: NC_000001.11:113982673:C:A,NC_000001.11:113982673:C:T
Gene:: OLFML3 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.113982674C>A, NC_000001.11:g.113982674C>T, NC_000001.10:g.114525296C>A, NC_000001.10:g.114525296C>T, NG_053036.1:g.8284C>A, NG_053036.1:g.8284C>T

Select item 148388136119.

rs1483881361 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 1:113982600 (GRCh38)
1:114525222 (GRCh37)
Canonical SPDI:: NC_000001.11:113982599:A:G,NC_000001.11:113982599:A:T
Gene:: OLFML3 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.113982600A>G, NC_000001.11:g.113982600A>T, NC_000001.10:g.114525222A>G, NC_000001.10:g.114525222A>T, NG_053036.1:g.8210A>G, NG_053036.1:g.8210A>T

Select item 148176003220.

rs1481760032 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:113977904 (GRCh38)
1:114520526 (GRCh37)
Canonical SPDI:: NC_000001.11:113977903:C:G
Gene:: OLFML3 (Varview), HIPK1 (Varview)
Functional Consequence:: downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.113977904C>G, NC_000001.10:g.114520526C>G, NG_053036.1:g.3514C>G

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