SNP Links for Gene (Select 58503) - SNP

Links from Gene

Items: 1 to 20 of 3056

<< First< Prev

Page of 153

Next >Last >>

Select item 14908790781.

rs1490879078 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:70407777 (GRCh38)
4:71273494 (GRCh37)
Canonical SPDI:: NC_000004.12:70407776:C:T
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.70407777C>T, NC_000004.11:g.71273494C>T

Select item 14908441702.

rs1490844170 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:70409019 (GRCh38)
4:71274736 (GRCh37)
Canonical SPDI:: NC_000004.12:70409018:C:T
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.70409019C>T, NC_000004.11:g.71274736C>T

Select item 14907005423.

rs1490700542 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:70400232 (GRCh38)
4:71265949 (GRCh37)
Canonical SPDI:: NC_000004.12:70400231:T:C
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000021/3 (GnomAD)
C=0.000064/17 (TOPMED)
C=0.000684/2 (KOREAN)
C=0.000885/15 (TOMMO)
C=0.001092/2 (Korea1K)
HGVS:: NC_000004.12:g.70400232T>C, NC_000004.11:g.71265949T>C

Select item 14899856584.

rs1489985658 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:70400297 (GRCh38)
4:71266014 (GRCh37)
Canonical SPDI:: NC_000004.12:70400296:C:T
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.70400297C>T, NC_000004.11:g.71266014C>T

Select item 14894158355.

rs1489415835 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 4:70402367 (GRCh38)
4:71268084 (GRCh37)
Canonical SPDI:: NC_000004.12:70402366:T:G
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000004.12:g.70402367T>G, NC_000004.11:g.71268084T>G

Select item 14894042886.

rs1489404288 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 4:70406463 (GRCh38)
4:71272180 (GRCh37)
Canonical SPDI:: NC_000004.12:70406462:T:G
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.70406463T>G, NC_000004.11:g.71272180T>G

Select item 14893740627.

rs1489374062 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:70408848 (GRCh38)
4:71274565 (GRCh37)
Canonical SPDI:: NC_000004.12:70408847:G:A
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.70408848G>A, NC_000004.11:g.71274565G>A

Select item 14893146318.

rs1489314631 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:70407911 (GRCh38)
4:71273628 (GRCh37)
Canonical SPDI:: NC_000004.12:70407910:C:T
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000029/4 (GnomAD)
HGVS:: NC_000004.12:g.70407911C>T, NC_000004.11:g.71273628C>T

Select item 14892914159.

rs1489291415 [Homo sapiens]

Variant type:: INS
Alleles:: ->AG [Show Flanks]
Chromosome:: 4:70406642 (GRCh38)
4:71272360 (GRCh37)
Canonical SPDI:: NC_000004.12:70406642::AG
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: AG=0.000021/3 (GnomAD)
HGVS:: NC_000004.12:g.70406642_70406643insAG, NC_000004.11:g.71272359_71272360insAG

Select item 148925266610.

rs1489252666 [Homo sapiens]

Variant type:: DELINS
Alleles:: AATT>- [Show Flanks]
Chromosome:: 4:70405670 (GRCh38)
4:71271387 (GRCh37)
Canonical SPDI:: NC_000004.12:70405663:TTAATTAATT:TTAATT
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTAATT=0./0 (ALFA)
-=0.000008/2 (TOPMED)
-=0.000021/3 (GnomAD)
HGVS:: NC_000004.12:g.70405666AATT[1], NC_000004.11:g.71271383AATT[1]

Select item 148913213211.

rs1489132132 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:70397963 (GRCh38)
4:71263680 (GRCh37)
Canonical SPDI:: NC_000004.12:70397962:T:C
Gene:: OPRPN (Varview)
Functional Consequence:: non_coding_transcript_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.70397963T>C, NC_000004.11:g.71263680T>C, NM_021225.5:c.-93T>C, NM_021225.4:c.-93T>C, NM_001302807.2:c.-93T>C, NM_001302807.1:c.-93T>C, NR_126503.2:n.24T>C, NR_126503.1:n.82T>C

Select item 148908835512.

rs1489088355 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:70409682 (GRCh38)
4:71275399 (GRCh37)
Canonical SPDI:: NC_000004.12:70409681:G:A
Gene:: OPRPN (Varview)
Functional Consequence:: synonymous_variant,3_prime_UTR_variant,non_coding_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000016/4 (GnomAD_exomes)
A=0.000025/3 (ExAC)
A=0.00006/16 (TOPMED)
A=0.000342/1 (KOREAN)
A=0.000546/1 (Korea1K)
HGVS:: NC_000004.12:g.70409682G>A, NC_000004.11:g.71275399G>A, NM_021225.5:c.354G>A, NM_021225.4:c.354G>A, NM_001302807.2:c.*26G>A, NM_001302807.1:c.*26G>A, NR_126503.2:n.404G>A, NR_126503.1:n.462G>A

Select item 148883688313.

rs1488836883 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:70397525 (GRCh38)
4:71263242 (GRCh37)
Canonical SPDI:: NC_000004.12:70397524:C:T
Gene:: OPRPN (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000015/2 (GnomAD)
HGVS:: NC_000004.12:g.70397525C>T, NC_000004.11:g.71263242C>T

Select item 148867971414.

rs1488679714 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 4:70408910 (GRCh38)
4:71274627 (GRCh37)
Canonical SPDI:: NC_000004.12:70408909:T:A
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.70408910T>A, NC_000004.11:g.71274627T>A

Select item 148847845915.

rs1488478459 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:70400068 (GRCh38)
4:71265785 (GRCh37)
Canonical SPDI:: NC_000004.12:70400067:C:T
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000004.12:g.70400068C>T, NC_000004.11:g.71265785C>T

Select item 148834192016.

rs1488341920 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 4:70402939 (GRCh38)
4:71268656 (GRCh37)
Canonical SPDI:: NC_000004.12:70402938:G:C
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000029/4 (GnomAD)
HGVS:: NC_000004.12:g.70402939G>C, NC_000004.11:g.71268656G>C

Select item 148831007217.

rs1488310072 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:70405647 (GRCh38)
4:71271364 (GRCh37)
Canonical SPDI:: NC_000004.12:70405646:C:T
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.70405647C>T, NC_000004.11:g.71271364C>T

Select item 148825404218.

rs1488254042 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 4:70397367 (GRCh38)
4:71263084 (GRCh37)
Canonical SPDI:: NC_000004.12:70397366:T:A,NC_000004.12:70397366:T:C
Gene:: OPRPN (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0./0 (GnomAD)
A=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.70397367T>A, NC_000004.12:g.70397367T>C, NC_000004.11:g.71263084T>A, NC_000004.11:g.71263084T>C

Select item 148811526519.

rs1488115265 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 4:70410070 (GRCh38)
4:71275787 (GRCh37)
Canonical SPDI:: NC_000004.12:70410069:GG:G
Gene:: OPRPN (Varview)
Functional Consequence:: frameshift_variant,3_prime_UTR_variant,non_coding_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.70410071del, NC_000004.11:g.71275788del, NM_021225.5:c.743del, NM_021225.4:c.743del, NM_001302807.2:c.*415del, NM_001302807.1:c.*415del, NR_126503.2:n.793del, NR_126503.1:n.851del, NP_067048.4:p.Gly248fs

Select item 148796871520.

rs1487968715 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 4:70407024 (GRCh38)
4:71272741 (GRCh37)
Canonical SPDI:: NC_000004.12:70407023:CCC:CC
Gene:: OPRPN (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.70407026del, NC_000004.11:g.71272743del

<< First< Prev

Page of 153

Next >Last >>

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 3056

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity