SNP Links for Gene (Select 64211) - SNP

Links from Gene

Items: 1 to 20 of 2994

<< First< Prev

Page of 150

Next >Last >>

Select item 14915006401.

rs1491500640 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 12:113469698 (GRCh38)
12:113907503 (GRCh37)
Canonical SPDI:: NC_000012.12:113469697:CA:
Gene:: LHX5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.113469698_113469699del, NC_000012.11:g.113907503_113907504del

Select item 14908679762.

rs1490867976 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:113470556 (GRCh38)
12:113908361 (GRCh37)
Canonical SPDI:: NC_000012.12:113470555:G:A
Gene:: LHX5 (Varview), LHX5-AS1 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000019/5 (TOPMED)
HGVS:: NC_000012.12:g.113470556G>A, NC_000012.11:g.113908361G>A

Select item 14904822293.

rs1490482229 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:113462572 (GRCh38)
12:113900377 (GRCh37)
Canonical SPDI:: NC_000012.12:113462571:T:C
Gene:: LHX5 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000015/4 (TOPMED)
C=0.000468/3 (1000Genomes)
HGVS:: NC_000012.12:g.113462572T>C, NC_000012.11:g.113900377T>C, NM_022363.3:c.*618A>G

Select item 14901390354.

rs1490139035 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:113464424 (GRCh38)
12:113902229 (GRCh37)
Canonical SPDI:: NC_000012.12:113464423:G:A
Gene:: LHX5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000012.12:g.113464424G>A, NC_000012.11:g.113902229G>A

Select item 14901285895.

rs1490128589 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:113469110 (GRCh38)
12:113906915 (GRCh37)
Canonical SPDI:: NC_000012.12:113469109:C:T
Gene:: LHX5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000012.12:g.113469110C>T, NC_000012.11:g.113906915C>T

Select item 14901244266.

rs1490124426 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:113463585 (GRCh38)
12:113901390 (GRCh37)
Canonical SPDI:: NC_000012.12:113463584:G:A
Gene:: LHX5 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000012.12:g.113463585G>A, NC_000012.11:g.113901390G>A

Select item 14899765467.

rs1489976546 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 12:113464022 (GRCh38)
12:113901828 (GRCh37)
Canonical SPDI:: NC_000012.12:113464022:G:GG
Gene:: LHX5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000012.12:g.113464023dup, NC_000012.11:g.113901828dup

Select item 14894812058.

rs1489481205 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 12:113471303 (GRCh38)
12:113909108 (GRCh37)
Canonical SPDI:: NC_000012.12:113471302:A:
Gene:: LHX5 (Varview), LHX5-AS1 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: -=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000012.12:g.113471303del, NC_000012.11:g.113909108del

Select item 14894597579.

rs1489459757 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:113467748 (GRCh38)
12:113905553 (GRCh37)
Canonical SPDI:: NC_000012.12:113467747:C:T
Gene:: LHX5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.113467748C>T, NC_000012.11:g.113905553C>T

Select item 148869967810.

rs1488699678 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:113467264 (GRCh38)
12:113905069 (GRCh37)
Canonical SPDI:: NC_000012.12:113467263:T:C
Gene:: LHX5 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.113467264T>C, NC_000012.11:g.113905069T>C, NM_022363.3:c.833A>G, NM_022363.2:c.833A>G, NP_071758.1:p.Tyr278Cys

Select item 148862362511.

rs1488623625 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:113469197 (GRCh38)
12:113907002 (GRCh37)
Canonical SPDI:: NC_000012.12:113469196:T:C
Gene:: LHX5 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000012.12:g.113469197T>C, NC_000012.11:g.113907002T>C, NM_022363.3:c.322A>G, NM_022363.2:c.322A>G, NP_071758.1:p.Ile108Val

Select item 148833439312.

rs1488334393 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 12:113472688 (GRCh38)
12:113910493 (GRCh37)
Canonical SPDI:: NC_000012.12:113472687:G:A,NC_000012.12:113472687:G:T
Gene:: LHX5 (Varview), LHX5-AS1 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.113472688G>A, NC_000012.12:g.113472688G>T, NC_000012.11:g.113910493G>A, NC_000012.11:g.113910493G>T

Select item 148813307213.

rs1488133072 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:113465403 (GRCh38)
12:113903208 (GRCh37)
Canonical SPDI:: NC_000012.12:113465402:G:A
Gene:: LHX5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.113465403G>A, NC_000012.11:g.113903208G>A

Select item 148793565514.

rs1487935655 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 12:113466796 (GRCh38)
12:113904601 (GRCh37)
Canonical SPDI:: NC_000012.12:113466795:G:T
Gene:: LHX5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.113466796G>T, NC_000012.11:g.113904601G>T

Select item 148768845515.

rs1487688455 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:113470142 (GRCh38)
12:113907947 (GRCh37)
Canonical SPDI:: NC_000012.12:113470141:T:C
Gene:: LHX5 (Varview), LHX5-AS1 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.113470142T>C, NC_000012.11:g.113907947T>C

Select item 148718432916.

rs1487184329 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:113468426 (GRCh38)
12:113906231 (GRCh37)
Canonical SPDI:: NC_000012.12:113468425:A:G
Gene:: LHX5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000012.12:g.113468426A>G, NC_000012.11:g.113906231A>G

Select item 148711217117.

rs1487112171 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 12:113462393 (GRCh38)
12:113900198 (GRCh37)
Canonical SPDI:: NC_000012.12:113462392:G:C
Gene:: LHX5 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.113462393G>C, NC_000012.11:g.113900198G>C, NM_022363.3:c.*797C>G

Select item 148709890118.

rs1487098901 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:113465505 (GRCh38)
12:113903310 (GRCh37)
Canonical SPDI:: NC_000012.12:113465504:C:T
Gene:: LHX5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.113465505C>T, NC_000012.11:g.113903310C>T

Select item 148707242319.

rs1487072423 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:113471146 (GRCh38)
12:113908951 (GRCh37)
Canonical SPDI:: NC_000012.12:113471145:G:A
Gene:: LHX5 (Varview), LHX5-AS1 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.113471146G>A, NC_000012.11:g.113908951G>A

Select item 148682139320.

rs1486821393 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:113463664 (GRCh38)
12:113901469 (GRCh37)
Canonical SPDI:: NC_000012.12:113463663:C:T
Gene:: LHX5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.113463664C>T, NC_000012.11:g.113901469C>T

<< First< Prev

Page of 150

Next >Last >>

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 2994

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity