SNP Links for Gene (Select 643332) - SNP

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Select item 14905060621.

rs1490506062 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 14:20918240 (GRCh38)
14:21386399 (GRCh37)
Canonical SPDI:: NC_000014.9:20918239:T:A
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
A=0.000036/5 (GnomAD)
HGVS:: NC_000014.9:g.20918240T>A, NC_000014.8:g.21386399T>A

Select item 14899483522.

rs1489948352 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 14:20917474 (GRCh38)
14:21385633 (GRCh37)
Canonical SPDI:: NC_000014.9:20917473:C:G,NC_000014.9:20917473:C:T
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by cluster
MAF:: G=0.000007/1 (GnomAD)
T=0.000035/1 (TOMMO)
T=0.001027/3 (KOREAN)
HGVS:: NC_000014.9:g.20917474C>G, NC_000014.9:g.20917474C>T, NC_000014.8:g.21385633C>G, NC_000014.8:g.21385633C>T

Select item 14881626563.

rs1488162656 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 14:20920292 (GRCh38)
14:21388451 (GRCh37)
Canonical SPDI:: NC_000014.9:20920291:G:C,NC_000014.9:20920291:G:T
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: intron_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000019/5 (TOPMED)
HGVS:: NC_000014.9:g.20920292G>C, NC_000014.9:g.20920292G>T, NC_000014.8:g.21388451G>C, NC_000014.8:g.21388451G>T

Select item 14876371554.

rs1487637155 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:20917593 (GRCh38)
14:21385752 (GRCh37)
Canonical SPDI:: NC_000014.9:20917592:A:G
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.20917593A>G, NC_000014.8:g.21385752A>G

Select item 14865433895.

rs1486543389 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:20919879 (GRCh38)
14:21388038 (GRCh37)
Canonical SPDI:: NC_000014.9:20919878:T:C
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000014.9:g.20919879T>C, NC_000014.8:g.21388038T>C, NR_033909.1:n.308T>C

Select item 14853237766.

rs1485323776 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 14:20918439 (GRCh38)
14:21386598 (GRCh37)
Canonical SPDI:: NC_000014.9:20918438:A:C,NC_000014.9:20918438:A:G
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000035/1 (TOMMO)
HGVS:: NC_000014.9:g.20918439A>C, NC_000014.9:g.20918439A>G, NC_000014.8:g.21386598A>C, NC_000014.8:g.21386598A>G

Select item 14849060157.

rs1484906015 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:20918524 (GRCh38)
14:21386683 (GRCh37)
Canonical SPDI:: NC_000014.9:20918523:C:T
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000029/4 (GnomAD)
T=0.000248/4 (TOMMO)
T=0.000546/1 (Korea1K)
HGVS:: NC_000014.9:g.20918524C>T, NC_000014.8:g.21386683C>T

Select item 14846349108.

rs1484634910 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 14:20917485 (GRCh38)
14:21385644 (GRCh37)
Canonical SPDI:: NC_000014.9:20917484:G:C
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000022/3 (GnomAD)
HGVS:: NC_000014.9:g.20917485G>C, NC_000014.8:g.21385644G>C

Select item 14838042239.

rs1483804223 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:20920115 (GRCh38)
14:21388274 (GRCh37)
Canonical SPDI:: NC_000014.9:20920114:C:T
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.20920115C>T, NC_000014.8:g.21388274C>T, NR_033909.1:n.544C>T

Select item 148205016910.

rs1482050169 [Homo sapiens]

Variant type:: DELINS
Alleles:: TG>- [Show Flanks]
Chromosome:: 14:20919238 (GRCh38)
14:21387397 (GRCh37)
Canonical SPDI:: NC_000014.9:20919235:TGTG:TG
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGTG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.20919236TG[1], NC_000014.8:g.21387395TG[1]

Select item 148155957311.

rs1481559573 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:20918369 (GRCh38)
14:21386528 (GRCh37)
Canonical SPDI:: NC_000014.9:20918368:C:T
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000014.9:g.20918369C>T, NC_000014.8:g.21386528C>T

Select item 148150824212.

rs1481508242 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 14:20917378 (GRCh38)
14:21385537 (GRCh37)
Canonical SPDI:: NC_000014.9:20917377:G:C
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.20917378G>C, NC_000014.8:g.21385537G>C

Select item 148140924113.

rs1481409241 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:20918193 (GRCh38)
14:21386352 (GRCh37)
Canonical SPDI:: NC_000014.9:20918192:T:C
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000023/6 (TOPMED)
HGVS:: NC_000014.9:g.20918193T>C, NC_000014.8:g.21386352T>C

Select item 148011918714.

rs1480119187 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 14:20918248 (GRCh38)
14:21386407 (GRCh37)
Canonical SPDI:: NC_000014.9:20918247:G:T
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0.000084/1 (ALFA)
T=0.00015/20 (GnomAD)
HGVS:: NC_000014.9:g.20918248G>T, NC_000014.8:g.21386407G>T

Select item 147830849115.

rs1478308491 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:20918025 (GRCh38)
14:21386184 (GRCh37)
Canonical SPDI:: NC_000014.9:20918024:A:G
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.20918025A>G, NC_000014.8:g.21386184A>G

Select item 147763628516.

rs1477636285 [Homo sapiens]

Variant type:: DELINS
Alleles:: GC>- [Show Flanks]
Chromosome:: 14:20920013 (GRCh38)
14:21388172 (GRCh37)
Canonical SPDI:: NC_000014.9:20920010:GCGC:GC
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: GCGC=0./0 (ALFA)
-=0.000004/1 (GnomAD_exomes)
-=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.20920011GC[1], NC_000014.8:g.21388170GC[1], NR_033909.1:n.440GC[1]

Select item 147503111017.

rs1475031110 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:20917692 (GRCh38)
14:21385851 (GRCh37)
Canonical SPDI:: NC_000014.9:20917691:C:T
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.20917692C>T, NC_000014.8:g.21385851C>T

Select item 147490271718.

rs1474902717 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 14:20917542 (GRCh38)
14:21385701 (GRCh37)
Canonical SPDI:: NC_000014.9:20917541:C:A,NC_000014.9:20917541:C:T
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.20917542C>A, NC_000014.9:g.20917542C>T, NC_000014.8:g.21385701C>A, NC_000014.8:g.21385701C>T

Select item 147356397219.

rs1473563972 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:20919230 (GRCh38)
14:21387389 (GRCh37)
Canonical SPDI:: NC_000014.9:20919229:T:C
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.000142/2 (TOMMO)
HGVS:: NC_000014.9:g.20919230T>C, NC_000014.8:g.21387389T>C

Select item 147111131920.

rs1471111319 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C,G [Show Flanks]
Chromosome:: 14:20919553 (GRCh38)
14:21387712 (GRCh37)
Canonical SPDI:: NC_000014.9:20919552:T:A,NC_000014.9:20919552:T:C,NC_000014.9:20919552:T:G
Gene:: RNASE2CP (Varview), LOC100507513 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.009346/2 (Vietnamese)
HGVS:: NC_000014.9:g.20919553T>A, NC_000014.9:g.20919553T>C, NC_000014.9:g.20919553T>G, NC_000014.8:g.21387712T>A, NC_000014.8:g.21387712T>C, NC_000014.8:g.21387712T>G

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