SNP Links for Gene (Select 644242) - SNP

Links from Gene

Items: 1 to 20 of 833

<< First< Prev

Page of 42

Next >Last >>

Select item 14911977021.

rs1491197702 has merged into rs35860148 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTT>-,T,TT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTTTTT [Show Flanks]
Chromosome:: 1:119599989 (GRCh38)
1:120142612 (GRCh37)
Canonical SPDI:: NC_000001.11:119599977:TTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000001.11:119599977:TTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000001.11:119599977:TTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000001.11:119599977:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:119599977:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:119599977:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000001.11:119599977:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000001.11:119599977:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT
Gene:: LINC00622 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTTT=0.0007/7 (ALFA)
-=0.0491/182 (TWINSUK)
-=0.0568/219 (ALSPAC)
HGVS:: NC_000001.11:g.119599989_119599991del, NC_000001.11:g.119599990_119599991del, NC_000001.11:g.119599991del, NC_000001.11:g.119599991dup, NC_000001.11:g.119599990_119599991dup, NC_000001.11:g.119599989_119599991dup, NC_000001.11:g.119599988_119599991dup, NC_000001.11:g.119599984_119599991dup, NC_000001.10:g.120142612_120142614del, NC_000001.10:g.120142613_120142614del, NC_000001.10:g.120142614del, NC_000001.10:g.120142614dup, NC_000001.10:g.120142613_120142614dup, NC_000001.10:g.120142612_120142614dup, NC_000001.10:g.120142611_120142614dup, NC_000001.10:g.120142607_120142614dup

Select item 14909023192.

rs1490902319 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:119600945 (GRCh38)
1:120143568 (GRCh37)
Canonical SPDI:: NC_000001.11:119600944:A:C
Gene:: LINC00622 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000023/6 (TOPMED)
HGVS:: NC_000001.11:g.119600945A>C, NC_000001.10:g.120143568A>C

Select item 14908761813.

rs1490876181 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:119600084 (GRCh38)
1:120142707 (GRCh37)
Canonical SPDI:: NC_000001.11:119600083:C:T
Gene:: LINC00622 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000034/9 (TOPMED)
HGVS:: NC_000001.11:g.119600084C>T, NC_000001.10:g.120142707C>T

Select item 14900566954.

rs1490056695 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 1:119599359 (GRCh38)
1:120141982 (GRCh37)
Canonical SPDI:: NC_000001.11:119599358:A:G,NC_000001.11:119599358:A:T
Gene:: LINC00622 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000025/3 (GnomAD)
T=0.000156/1 (1000Genomes)
T=0.000212/6 (TOMMO)
HGVS:: NC_000001.11:g.119599359A>G, NC_000001.11:g.119599359A>T, NC_000001.10:g.120141982A>G, NC_000001.10:g.120141982A>T

Select item 14897742685.

rs1489774268 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:119598092 (GRCh38)
1:120140715 (GRCh37)
Canonical SPDI:: NC_000001.11:119598091:T:C
Gene:: LINC00622 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.119598092T>C, NC_000001.10:g.120140715T>C, NR_036540.1:n.1200A>G

Select item 14886820296.

rs1488682029 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:119598434 (GRCh38)
1:120141057 (GRCh37)
Canonical SPDI:: NC_000001.11:119598433:T:C
Gene:: LINC00622 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000029/4 (GnomAD)
HGVS:: NC_000001.11:g.119598434T>C, NC_000001.10:g.120141057T>C, NR_036540.1:n.858A>G

Select item 14872028157.

rs1487202815 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:119599374 (GRCh38)
1:120141997 (GRCh37)
Canonical SPDI:: NC_000001.11:119599373:C:G
Gene:: LINC00622 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.119599374C>G, NC_000001.10:g.120141997C>G

Select item 14867090458.

rs1486709045 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 1:119598164 (GRCh38)
1:120140787 (GRCh37)
Canonical SPDI:: NC_000001.11:119598163:T:C,NC_000001.11:119598163:T:G
Gene:: LINC00622 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
T=0.5/1 (SGDP_PRJ)
HGVS:: NC_000001.11:g.119598164T>C, NC_000001.11:g.119598164T>G, NC_000001.10:g.120140787T>C, NC_000001.10:g.120140787T>G, NR_036540.1:n.1128A>G, NR_036540.1:n.1128A>C

Select item 14864076619.

rs1486407661 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 1:119597528 (GRCh38)
1:120140151 (GRCh37)
Canonical SPDI:: NC_000001.11:119597527:GGG:GG
Gene:: LINC00622 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
-=0.000019/5 (TOPMED)
HGVS:: NC_000001.11:g.119597530del, NC_000001.10:g.120140153del

Select item 148434977210.

rs1484349772 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:119598176 (GRCh38)
1:120140799 (GRCh37)
Canonical SPDI:: NC_000001.11:119598175:T:C
Gene:: LINC00622 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000001.11:g.119598176T>C, NC_000001.10:g.120140799T>C, NR_036540.1:n.1116A>G

Select item 148399615811.

rs1483996158 [Homo sapiens]

Variant type:: INS
Alleles:: ->CTTAGCCCT [Show Flanks]
Chromosome:: 1:119597536 (GRCh38)
1:120140160 (GRCh37)
Canonical SPDI:: NC_000001.11:119597536::CTTAGCCCT
Gene:: LINC00622 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTTAGCCCT=0./0 (ALFA)
CTTAGCCCT=0.000004/1 (TOPMED)
CTTAGCCCT=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.119597536_119597537insCTTAGCCCT, NC_000001.10:g.120140159_120140160insCTTAGCCCT

Select item 148318451712.

rs1483184517 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:119599612 (GRCh38)
1:120142235 (GRCh37)
Canonical SPDI:: NC_000001.11:119599611:A:G
Gene:: LINC00622 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.119599612A>G, NC_000001.10:g.120142235A>G

Select item 148220611013.

rs1482206110 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 1:119599983 (GRCh38)
1:120142606 (GRCh37)
Canonical SPDI:: NC_000001.11:119599982:T:A,NC_000001.11:119599982:T:G
Gene:: LINC00622 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.119599983T>A, NC_000001.11:g.119599983T>G, NC_000001.10:g.120142606T>A, NC_000001.10:g.120142606T>G

Select item 148217584414.

rs1482175844 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:119598981 (GRCh38)
1:120141604 (GRCh37)
Canonical SPDI:: NC_000001.11:119598980:C:A
Gene:: LINC00622 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.119598981C>A, NC_000001.10:g.120141604C>A, NR_036540.1:n.311G>T

Select item 148151630215.

rs1481516302 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:119599058 (GRCh38)
1:120141681 (GRCh37)
Canonical SPDI:: NC_000001.11:119599057:G:A
Gene:: LINC00622 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.119599058G>A, NC_000001.10:g.120141681G>A, NR_036540.1:n.234C>T

Select item 148055882816.

rs1480558828 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 1:119600978 (GRCh38)
1:120143601 (GRCh37)
Canonical SPDI:: NC_000001.11:119600977:G:C,NC_000001.11:119600977:G:T
Gene:: LINC00622 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.119600978G>C, NC_000001.11:g.119600978G>T, NC_000001.10:g.120143601G>C, NC_000001.10:g.120143601G>T

Select item 148008458217.

rs1480084582 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:119599491 (GRCh38)
1:120142114 (GRCh37)
Canonical SPDI:: NC_000001.11:119599490:C:T
Gene:: LINC00622 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000008/1 (GnomAD)
HGVS:: NC_000001.11:g.119599491C>T, NC_000001.10:g.120142114C>T

Select item 147998397718.

rs1479983977 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:119597974 (GRCh38)
1:120140597 (GRCh37)
Canonical SPDI:: NC_000001.11:119597973:A:G
Gene:: LINC00622 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.119597974A>G, NC_000001.10:g.120140597A>G, NR_036540.1:n.1318T>C

Select item 147953363819.

rs1479533638 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:119601049 (GRCh38)
1:120143672 (GRCh37)
Canonical SPDI:: NC_000001.11:119601048:T:A
Gene:: LINC00622 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.119601049T>A, NC_000001.10:g.120143672T>A

Select item 147932096920.

rs1479320969 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:119598962 (GRCh38)
1:120141585 (GRCh37)
Canonical SPDI:: NC_000001.11:119598961:C:G
Gene:: LINC00622 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.119598962C>G, NC_000001.10:g.120141585C>G, NR_036540.1:n.330G>C

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 833

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity