SNP Links for Gene (Select 646480) - SNP

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Select item 14902808471.

rs1490280847 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:81462907 (GRCh38)
8:82375142 (GRCh37)
Canonical SPDI:: NC_000008.11:81462906:A:G
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000177/3 (TOMMO)
HGVS:: NC_000008.11:g.81462907A>G, NC_000008.10:g.82375142A>G

Select item 14890480542.

rs1489048054 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:81462647 (GRCh38)
8:82374882 (GRCh37)
Canonical SPDI:: NC_000008.11:81462646:T:C
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.00003/8 (TOPMED)
C=0.000036/5 (GnomAD)
HGVS:: NC_000008.11:g.81462647T>C, NC_000008.10:g.82374882T>C

Select item 14890005803.

rs1489000580 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 8:81461405 (GRCh38)
8:82373640 (GRCh37)
Canonical SPDI:: NC_000008.11:81461404:C:G
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.81461405C>G, NC_000008.10:g.82373640C>G

Select item 14883899604.

rs1488389960 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 8:81460192 (GRCh38)
8:82372427 (GRCh37)
Canonical SPDI:: NC_000008.11:81460191:G:A,NC_000008.11:81460191:G:C
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.00016/1 (1000Genomes)
HGVS:: NC_000008.11:g.81460192G>A, NC_000008.11:g.81460192G>C, NC_000008.10:g.82372427G>A, NC_000008.10:g.82372427G>C

Select item 14881608585.

rs1488160858 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:81459337 (GRCh38)
8:82371572 (GRCh37)
Canonical SPDI:: NC_000008.11:81459336:C:T
Gene:: FABP9 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.81459337C>T, NC_000008.10:g.82371572C>T, NM_001080526.2:c.74G>A, NM_001080526.1:c.74G>A, NP_001073995.1:p.Gly25Glu

Select item 14880327116.

rs1488032711 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:81462265 (GRCh38)
8:82374500 (GRCh37)
Canonical SPDI:: NC_000008.11:81462264:A:G
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.81462265A>G, NC_000008.10:g.82374500A>G

Select item 14879574327.

rs1487957432 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 8:81462640 (GRCh38)
8:82374875 (GRCh37)
Canonical SPDI:: NC_000008.11:81462639:T:G
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000008.11:g.81462640T>G, NC_000008.10:g.82374875T>G

Select item 14868367188.

rs1486836718 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:81458323 (GRCh38)
8:82370558 (GRCh37)
Canonical SPDI:: NC_000008.11:81458322:A:G
Gene:: FABP9 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000015/4 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000008.11:g.81458323A>G, NC_000008.10:g.82370558A>G, NM_001080526.2:c.*60T>C

Select item 14866170079.

rs1486617007 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:81462797 (GRCh38)
8:82375032 (GRCh37)
Canonical SPDI:: NC_000008.11:81462796:A:G
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.81462797A>G, NC_000008.10:g.82375032A>G

Select item 148639430710.

rs1486394307 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 8:81461731 (GRCh38)
8:82373966 (GRCh37)
Canonical SPDI:: NC_000008.11:81461730:G:A,NC_000008.11:81461730:G:C
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.81461731G>A, NC_000008.11:g.81461731G>C, NC_000008.10:g.82373966G>A, NC_000008.10:g.82373966G>C, XR_001745980.2:n.274G>A, XR_001745980.2:n.274G>C, XR_001745980.1:n.271G>A, XR_001745980.1:n.271G>C

Select item 148606418911.

rs1486064189 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:81461225 (GRCh38)
8:82373460 (GRCh37)
Canonical SPDI:: NC_000008.11:81461224:A:G
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000008.11:g.81461225A>G, NC_000008.10:g.82373460A>G

Select item 148585568812.

rs1485855688 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 8:81459464 (GRCh38)
8:82371699 (GRCh37)
Canonical SPDI:: NC_000008.11:81459463:T:A,NC_000008.11:81459463:T:C
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000008.11:g.81459464T>A, NC_000008.11:g.81459464T>C, NC_000008.10:g.82371699T>A, NC_000008.10:g.82371699T>C

Select item 148442968513.

rs1484429685 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:81460618 (GRCh38)
8:82372853 (GRCh37)
Canonical SPDI:: NC_000008.11:81460617:A:G
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.81460618A>G, NC_000008.10:g.82372853A>G

Select item 148426366914.

rs1484263669 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:81463273 (GRCh38)
8:82375508 (GRCh37)
Canonical SPDI:: NC_000008.11:81463272:T:C
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000054/1 (ALFA)
C=0.000053/14 (TOPMED)
C=0.000078/11 (GnomAD)
C=0.000223/1 (Estonian)
HGVS:: NC_000008.11:g.81463273T>C, NC_000008.10:g.82375508T>C

Select item 148404509415.

rs1484045094 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAATCTAT>- [Show Flanks]
Chromosome:: 8:81460487 (GRCh38)
8:82372722 (GRCh37)
Canonical SPDI:: NC_000008.11:81460481:TCTATAAATCTAT:TCTAT
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TCTAT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.81460487_81460494del, NC_000008.10:g.82372722_82372729del

Select item 148350913516.

rs1483509135 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 8:81459163 (GRCh38)
8:82371398 (GRCh37)
Canonical SPDI:: NC_000008.11:81459162:A:T
Gene:: FABP9 (Varview)
Functional Consequence:: splice_donor_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000008.11:g.81459163A>T, NC_000008.10:g.82371398A>T

Select item 148272550617.

rs1482725506 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:81459776 (GRCh38)
8:82372011 (GRCh37)
Canonical SPDI:: NC_000008.11:81459775:T:C
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000021/3 (GnomAD)
HGVS:: NC_000008.11:g.81459776T>C, NC_000008.10:g.82372011T>C

Select item 148251085418.

rs1482510854 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 8:81458585 (GRCh38)
8:82370821 (GRCh37)
Canonical SPDI:: NC_000008.11:81458585:TTT:TTTT
Gene:: FABP9 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.81458588dup, NC_000008.10:g.82370823dup

Select item 148238428519.

rs1482384285 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 8:81461614 (GRCh38)
8:82373849 (GRCh37)
Canonical SPDI:: NC_000008.11:81461613:G:A,NC_000008.11:81461613:G:T
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.81461614G>A, NC_000008.11:g.81461614G>T, NC_000008.10:g.82373849G>A, NC_000008.10:g.82373849G>T, XR_001745980.2:n.157G>A, XR_001745980.2:n.157G>T, XR_001745980.1:n.154G>A, XR_001745980.1:n.154G>T

Select item 148220765020.

rs1482207650 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 8:81462948 (GRCh38)
8:82375183 (GRCh37)
Canonical SPDI:: NC_000008.11:81462947:T:G
Gene:: FABP9 (Varview), LOC101927118 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.81462948T>G, NC_000008.10:g.82375183T>G

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