Links from Gene
Items: 1 to 20 of 1000
1.
rs1491586319 has merged into rs58705195 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- G>-,GG
[Show Flanks]
- Chromosome:
- 8:133525875
(GRCh38)
8:134538118
(GRCh37)
- Canonical SPDI:
- NC_000008.11:133525874:GGGGGG:GGGGG,NC_000008.11:133525874:GGGGGG:GGGGGGG
- Gene:
- ST3GAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GGGGGGG=0./0
(
ALFA)
-=0.00782/29
(TWINSUK)
-=0.01116/43
(ALSPAC)
-=0.015/9
(NorthernSweden)
-=0.01787/80
(Estonian)
-=0.02204/22
(GoNL)
- HGVS:
3.
rs1491542818 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->A
[Show Flanks]
- Chromosome:
- 8:133542112
(GRCh38)
8:134554356
(GRCh37)
- Canonical SPDI:
- NC_000008.11:133542112::A
- Gene:
- ST3GAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by cluster
- MAF:
A=0.00195/33
(TOMMO)
A=0.01247/1025
(GnomAD)
- HGVS:
6.
rs1491528996 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->TCTTTTTCTT
[Show Flanks]
- Chromosome:
- 8:133562837
(GRCh38)
8:134575081
(GRCh37)
- Canonical SPDI:
- NC_000008.11:133562837:CTT:CTTTCTTTTTCTT
- Gene:
- ST3GAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
CTTTCTTTTTCTT=0.00202/24
(
ALFA)
- HGVS:
7.
rs1491524358 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AT>-
[Show Flanks]
- Chromosome:
- 8:133497456
(GRCh38)
8:134509699
(GRCh37)
- Canonical SPDI:
- NC_000008.11:133497455:AT:
- Gene:
- ST3GAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.03962/470
(
ALFA)
-=0.0448/641
(TOMMO)
-=0.10687/10059
(GnomAD)
- HGVS:
8.
rs1491520267 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AG>-
[Show Flanks]
- Chromosome:
- 8:133487979
(GRCh38)
8:134500222
(GRCh37)
- Canonical SPDI:
- NC_000008.11:133487978:AG:
- Gene:
- ST3GAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.00016/1
(1000Genomes)
- HGVS:
9.
rs1491518253 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 8:133546478
(GRCh38)
8:134558721
(GRCh37)
- Canonical SPDI:
- NC_000008.11:133546477:CA:
- Gene:
- ST3GAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.00371/44
(
ALFA)
-=0.00202/57
(TOMMO)
- HGVS:
10.
rs1491508945 has merged into rs34571050 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TGTGTGTGTGTG>-,TG,TGTG,TGTGTG,TGTGTGTG,TGTGTGTGTG,TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTG
[Show Flanks]
- Chromosome:
- 8:133559050
(GRCh38)
8:134571293
(GRCh37)
- Canonical SPDI:
- NC_000008.11:133559035:TGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTG,NC_000008.11:133559035:TGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTG,NC_000008.11:133559035:TGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTG,NC_000008.11:133559035:TGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTG,NC_000008.11:133559035:TGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTG,NC_000008.11:133559035:TGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTG,NC_000008.11:133559035:TGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000008.11:133559035:TGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000008.11:133559035:TGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000008.11:133559035:TGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000008.11:133559035:TGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000008.11:133559035:TGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
- Gene:
- ST3GAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TGTGTGTGTGTGTGTG=0./0
(
ALFA)
- HGVS:
NC_000008.11:g.133559036TG[7], NC_000008.11:g.133559036TG[8], NC_000008.11:g.133559036TG[9], NC_000008.11:g.133559036TG[10], NC_000008.11:g.133559036TG[11], NC_000008.11:g.133559036TG[12], NC_000008.11:g.133559036TG[14], NC_000008.11:g.133559036TG[15], NC_000008.11:g.133559036TG[16], NC_000008.11:g.133559036TG[17], NC_000008.11:g.133559036TG[18], NC_000008.11:g.133559036TG[19], NC_000008.10:g.134571279TG[7], NC_000008.10:g.134571279TG[8], NC_000008.10:g.134571279TG[9], NC_000008.10:g.134571279TG[10], NC_000008.10:g.134571279TG[11], NC_000008.10:g.134571279TG[12], NC_000008.10:g.134571279TG[14], NC_000008.10:g.134571279TG[15], NC_000008.10:g.134571279TG[16], NC_000008.10:g.134571279TG[17], NC_000008.10:g.134571279TG[18], NC_000008.10:g.134571279TG[19]
11.
rs1491500138 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TG>-
[Show Flanks]
- Chromosome:
- 8:133494936
(GRCh38)
8:134507179
(GRCh37)
- Canonical SPDI:
- NC_000008.11:133494935:TG:
- Gene:
- ST3GAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.022/359
(
ALFA)
-=0.000178/5
(TOMMO)
-=0.001232/134
(GnomAD)
- HGVS:
12.
rs1491495997 has merged into rs35321251 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAA>-,A,AA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 8:133542790
(GRCh38)
8:134555033
(GRCh37)
- Canonical SPDI:
- NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:133542779:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- ST3GAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAA=0./0
(
ALFA)
AAA=0.3592/1799
(1000Genomes)
- HGVS:
NC_000008.11:g.133542790_133542801del, NC_000008.11:g.133542791_133542801del, NC_000008.11:g.133542792_133542801del, NC_000008.11:g.133542795_133542801del, NC_000008.11:g.133542796_133542801del, NC_000008.11:g.133542797_133542801del, NC_000008.11:g.133542798_133542801del, NC_000008.11:g.133542799_133542801del, NC_000008.11:g.133542800_133542801del, NC_000008.11:g.133542801del, NC_000008.11:g.133542801dup, NC_000008.11:g.133542800_133542801dup, NC_000008.11:g.133542799_133542801dup, NC_000008.11:g.133542798_133542801dup, NC_000008.11:g.133542797_133542801dup, NC_000008.11:g.133542796_133542801dup, NC_000008.11:g.133542795_133542801dup, NC_000008.11:g.133542794_133542801dup, NC_000008.11:g.133542793_133542801dup, NC_000008.11:g.133542792_133542801dup, NC_000008.11:g.133542801_133542802insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000008.10:g.134555033_134555044del, NC_000008.10:g.134555034_134555044del, NC_000008.10:g.134555035_134555044del, NC_000008.10:g.134555038_134555044del, NC_000008.10:g.134555039_134555044del, NC_000008.10:g.134555040_134555044del, NC_000008.10:g.134555041_134555044del, NC_000008.10:g.134555042_134555044del, NC_000008.10:g.134555043_134555044del, NC_000008.10:g.134555044del, NC_000008.10:g.134555044dup, NC_000008.10:g.134555043_134555044dup, NC_000008.10:g.134555042_134555044dup, NC_000008.10:g.134555041_134555044dup, NC_000008.10:g.134555040_134555044dup, NC_000008.10:g.134555039_134555044dup, NC_000008.10:g.134555038_134555044dup, NC_000008.10:g.134555037_134555044dup, NC_000008.10:g.134555036_134555044dup, NC_000008.10:g.134555035_134555044dup, NC_000008.10:g.134555044_134555045insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
13.
rs1491493968 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 8:133551565
(GRCh38)
8:134563809
(GRCh37)
- Canonical SPDI:
- NC_000008.11:133551565:G:GG
- Gene:
- ST3GAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency
- MAF:
G=0.000857/116
(GnomAD)
- HGVS:
16.
rs1491451640 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 8:133551563
(GRCh38)
8:134563807
(GRCh37)
- Canonical SPDI:
- NC_000008.11:133551563::G
- Gene:
- ST3GAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by cluster
- MAF:
G=0.000854/115
(GnomAD)
- HGVS:
17.
rs1491441054 has merged into rs11374505 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 8:133562860
(GRCh38)
8:134575103
(GRCh37)
- Canonical SPDI:
- NC_000008.11:133562850:TTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000008.11:133562850:TTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000008.11:133562850:TTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000008.11:133562850:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000008.11:133562850:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000008.11:133562850:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000008.11:133562850:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000008.11:133562850:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000008.11:133562850:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000008.11:133562850:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000008.11:133562850:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000008.11:133562850:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- ST3GAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTT=0./0
(
ALFA)
-=0.3/12
(GENOME_DK)
- HGVS:
NC_000008.11:g.133562860_133562867del, NC_000008.11:g.133562861_133562867del, NC_000008.11:g.133562862_133562867del, NC_000008.11:g.133562863_133562867del, NC_000008.11:g.133562864_133562867del, NC_000008.11:g.133562865_133562867del, NC_000008.11:g.133562866_133562867del, NC_000008.11:g.133562867del, NC_000008.11:g.133562867dup, NC_000008.11:g.133562866_133562867dup, NC_000008.11:g.133562859_133562867dup, NC_000008.11:g.133562851_133562867dup, NC_000008.10:g.134575103_134575110del, NC_000008.10:g.134575104_134575110del, NC_000008.10:g.134575105_134575110del, NC_000008.10:g.134575106_134575110del, NC_000008.10:g.134575107_134575110del, NC_000008.10:g.134575108_134575110del, NC_000008.10:g.134575109_134575110del, NC_000008.10:g.134575110del, NC_000008.10:g.134575110dup, NC_000008.10:g.134575109_134575110dup, NC_000008.10:g.134575102_134575110dup, NC_000008.10:g.134575094_134575110dup
18.
rs1491394757 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CC>-
[Show Flanks]
- Chromosome:
- 8:133562837
(GRCh38)
8:134575080
(GRCh37)
- Canonical SPDI:
- NC_000008.11:133562836:CC:
- Gene:
- ST3GAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000821/14
(TOMMO)
-=0.005051/3
(NorthernSweden)
-=0.007304/774
(GnomAD)
- HGVS:
20.
rs1491342730 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GAAGAAAGAAAG
[Show Flanks]
- Chromosome:
- 8:133551603
(GRCh38)
8:134563847
(GRCh37)
- Canonical SPDI:
- NC_000008.11:133551603:AAGAAAGAAAG:AAGAAAGAAAGGAAGAAAGAAAG
- Gene:
- ST3GAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAGAAAGAAAGGAAGAAAGAAAG=0.000169/2
(
ALFA)
AAGAAAGAAAGG=0.002623/361
(GnomAD)
- HGVS: