SNP Links for Gene (Select 64960) - SNP

Links from Gene

Items: 1 to 20 of 2559

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Select item 14909578611.

rs1490957861 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:36462806 (GRCh38)
1:36928407 (GRCh37)
Canonical SPDI:: NC_000001.11:36462805:T:C
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000021/3 (GnomAD)
C=0.000079/21 (TOPMED)
HGVS:: NC_000001.11:g.36462806T>C, NC_000001.10:g.36928407T>C

Select item 14909409232.

rs1490940923 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:36461663 (GRCh38)
1:36927264 (GRCh37)
Canonical SPDI:: NC_000001.11:36461662:G:A,NC_000001.11:36461662:G:T
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.36461663G>A, NC_000001.11:g.36461663G>T, NC_000001.10:g.36927264G>A, NC_000001.10:g.36927264G>T

Select item 14901394523.

rs1490139452 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:36463241 (GRCh38)
1:36928842 (GRCh37)
Canonical SPDI:: NC_000001.11:36463240:A:T
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000023/6 (TOPMED)
HGVS:: NC_000001.11:g.36463241A>T, NC_000001.10:g.36928842A>T

Select item 14893315564.

rs1489331556 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:36455450 (GRCh38)
1:36921051 (GRCh37)
Canonical SPDI:: NC_000001.11:36455449:A:G
Gene:: MRPS15 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000001.11:g.36455450A>G, NC_000001.10:g.36921051A>G

Select item 14892619535.

rs1489261953 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:36458319 (GRCh38)
1:36923920 (GRCh37)
Canonical SPDI:: NC_000001.11:36458318:C:T
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.36458319C>T, NC_000001.10:g.36923920C>T

Select item 14891404576.

rs1489140457 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:36462451 (GRCh38)
1:36928052 (GRCh37)
Canonical SPDI:: NC_000001.11:36462450:C:A
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000026/7 (TOPMED)
A=0.000156/1 (1000Genomes)
A=0.000342/1 (KOREAN)
A=0.000425/7 (TOMMO)
HGVS:: NC_000001.11:g.36462451C>A, NC_000001.10:g.36928052C>A

Select item 14885912527.

rs1488591252 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:36463907 (GRCh38)
1:36929508 (GRCh37)
Canonical SPDI:: NC_000001.11:36463906:C:G
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000342/1 (KOREAN)
HGVS:: NC_000001.11:g.36463907C>G, NC_000001.10:g.36929508C>G, NG_082023.1:g.317C>G

Select item 14885606478.

rs1488560647 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:36464533 (GRCh38)
1:36930134 (GRCh37)
Canonical SPDI:: NC_000001.11:36464532:C:G
Gene:: MRPS15 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.36464533C>G, NC_000001.10:g.36930134C>G, NG_016270.1:g.23376G>C, NG_082023.1:g.943C>G

Select item 14885195879.

rs1488519587 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:36463997 (GRCh38)
1:36929598 (GRCh37)
Canonical SPDI:: NC_000001.11:36463996:T:C
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.36463997T>C, NC_000001.10:g.36929598T>C, NG_082023.1:g.407T>C

Select item 148772863710.

rs1487728637 has merged into rs60005613 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA [Show Flanks]
Chromosome:: 1:36457286 (GRCh38)
1:36922887 (GRCh37)
Canonical SPDI:: NC_000001.11:36457275:AAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000001.11:36457275:AAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000001.11:36457275:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:36457275:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:36457275:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:36457275:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:36457275:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:36457275:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:36457275:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
-=0.09081/350 (ALSPAC)
-=0.20569/123 (NorthernSweden)
-=0.325/13 (GENOME_DK)
HGVS:: NC_000001.11:g.36457286_36457291del, NC_000001.11:g.36457287_36457291del, NC_000001.11:g.36457288_36457291del, NC_000001.11:g.36457289_36457291del, NC_000001.11:g.36457290_36457291del, NC_000001.11:g.36457291del, NC_000001.11:g.36457291dup, NC_000001.11:g.36457290_36457291dup, NC_000001.11:g.36457289_36457291dup, NC_000001.10:g.36922887_36922892del, NC_000001.10:g.36922888_36922892del, NC_000001.10:g.36922889_36922892del, NC_000001.10:g.36922890_36922892del, NC_000001.10:g.36922891_36922892del, NC_000001.10:g.36922892del, NC_000001.10:g.36922892dup, NC_000001.10:g.36922891_36922892dup, NC_000001.10:g.36922890_36922892dup

Select item 148770108611.

rs1487701086 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:36462719 (GRCh38)
1:36928320 (GRCh37)
Canonical SPDI:: NC_000001.11:36462718:C:G
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000001.11:g.36462719C>G, NC_000001.10:g.36928320C>G

Select item 148742739812.

rs1487427398 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:36458351 (GRCh38)
1:36923952 (GRCh37)
Canonical SPDI:: NC_000001.11:36458350:C:G
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.36458351C>G, NC_000001.10:g.36923952C>G

Select item 148740360913.

rs1487403609 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:36457609 (GRCh38)
1:36923210 (GRCh37)
Canonical SPDI:: NC_000001.11:36457608:A:G
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.36457609A>G, NC_000001.10:g.36923210A>G

Select item 148720203214.

rs1487202032 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:36463065 (GRCh38)
1:36928666 (GRCh37)
Canonical SPDI:: NC_000001.11:36463064:C:T
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000023/6 (TOPMED)
T=0.000029/4 (GnomAD)
T=0.000035/1 (TOMMO)
T=0.000684/2 (KOREAN)
C=0.5/1 (SGDP_PRJ)
HGVS:: NC_000001.11:g.36463065C>T, NC_000001.10:g.36928666C>T

Select item 148667053015.

rs1486670530 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAGG>- [Show Flanks]
Chromosome:: 1:36465960 (GRCh38)
1:36931561 (GRCh37)
Canonical SPDI:: NC_000001.11:36465952:AGGAAGGAAGG:AGGAAGG
Gene:: CSF3R (Varview), MRPS15 (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: AGGAAGG=0./0 (ALFA)
-=0.000043/6 (GnomAD)
HGVS:: NC_000001.11:g.36465956AAGG[1], NC_000001.10:g.36931557AAGG[1], NG_016270.1:g.21949TCCT[1]

Select item 148659814716.

rs1486598147 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:36464804 (GRCh38)
1:36930405 (GRCh37)
Canonical SPDI:: NC_000001.11:36464803:C:G
Gene:: MRPS15 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000001.11:g.36464804C>G, NC_000001.10:g.36930405C>G, NG_016270.1:g.23105G>C, NG_082023.1:g.1214C>G

Select item 148659346417.

rs1486593464 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:36465660 (GRCh38)
1:36931261 (GRCh37)
Canonical SPDI:: NC_000001.11:36465659:C:T
Gene:: CSF3R (Varview), MRPS15 (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.36465660C>T, NC_000001.10:g.36931261C>T, NG_016270.1:g.22249G>A

Select item 148652062618.

rs1486520626 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:36459609 (GRCh38)
1:36925210 (GRCh37)
Canonical SPDI:: NC_000001.11:36459608:C:T
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.36459609C>T, NC_000001.10:g.36925210C>T

Select item 148575924719.

rs1485759247 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:36458223 (GRCh38)
1:36923824 (GRCh37)
Canonical SPDI:: NC_000001.11:36458222:A:G
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.36458223A>G, NC_000001.10:g.36923824A>G

Select item 148568294620.

rs1485682946 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:36462589 (GRCh38)
1:36928190 (GRCh37)
Canonical SPDI:: NC_000001.11:36462588:A:G
Gene:: MRPS15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.36462589A>G, NC_000001.10:g.36928190A>G

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