SNP Links for Gene (Select 668) - SNP

Links from Gene

Items: 1 to 20 of 1435

<< First< Prev

Page of 72

Next >Last >>

Select item 14904699351.

rs1490469935 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 3:138946015 (GRCh38)
3:138664857 (GRCh37)
Canonical SPDI:: NC_000003.12:138946014:G:A,NC_000003.12:138946014:G:C
Gene:: FOXL2 (Varview), FOXL2NB (Varview), LINC01391 (Varview)
Functional Consequence:: coding_sequence_variant,upstream_transcript_variant,synonymous_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
A=0.000042/11 (TOPMED)
HGVS:: NC_000003.12:g.138946015G>A, NC_000003.12:g.138946015G>C, NC_000003.11:g.138664857G>A, NC_000003.11:g.138664857G>C, NG_029796.1:g.3782G>A, NG_029796.1:g.3782G>C, NG_012454.1:g.6126C>T, NG_012454.1:g.6126C>G, NM_023067.4:c.708C>T, NM_023067.4:c.708C>G, NM_023067.3:c.708C>T, NM_023067.3:c.708C>G

Select item 14904047012.

rs1490404701 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:138947065 (GRCh38)
3:138665907 (GRCh37)
Canonical SPDI:: NC_000003.12:138947064:C:T
Gene:: FOXL2 (Varview), FOXL2NB (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.138947065C>T, NC_000003.11:g.138665907C>T, NG_029796.1:g.4832C>T, NG_012454.1:g.5076G>A, NM_023067.4:c.-343G>A, NM_023067.3:c.-343G>A

Select item 14896061183.

rs1489606118 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:138945958 (GRCh38)
3:138664800 (GRCh37)
Canonical SPDI:: NC_000003.12:138945957:G:A
Gene:: FOXL2 (Varview), FOXL2NB (Varview), LINC01391 (Varview)
Functional Consequence:: coding_sequence_variant,upstream_transcript_variant,synonymous_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.138945958G>A, NC_000003.11:g.138664800G>A, NG_029796.1:g.3725G>A, NG_012454.1:g.6183C>T, NM_023067.4:c.765C>T, NM_023067.3:c.765C>T

Select item 14890596714.

rs1489059671 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:138949032 (GRCh38)
3:138667874 (GRCh37)
Canonical SPDI:: NC_000003.12:138949031:T:C
Gene:: FOXL2 (Varview), FOXL2NB (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.138949032T>C, NC_000003.11:g.138667874T>C, NG_029796.1:g.6799T>C, NG_012454.1:g.3109A>G

Select item 14886487125.

rs1488648712 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 3:138945192 (GRCh38)
3:138664034 (GRCh37)
Canonical SPDI:: NC_000003.12:138945191:G:T
Gene:: FOXL2 (Varview), LINC01391 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000003.12:g.138945192G>T, NC_000003.11:g.138664034G>T, NG_029796.1:g.2959G>T, NG_012454.1:g.6949C>A, NM_023067.4:c.*400C>A, NM_023067.3:c.*400C>A

Select item 14879132296.

rs1487913229 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 3:138946990 (GRCh38)
3:138665832 (GRCh37)
Canonical SPDI:: NC_000003.12:138946989:C:A,NC_000003.12:138946989:C:T
Gene:: FOXL2 (Varview), FOXL2NB (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.138946990C>A, NC_000003.12:g.138946990C>T, NC_000003.11:g.138665832C>A, NC_000003.11:g.138665832C>T, NG_029796.1:g.4757C>A, NG_029796.1:g.4757C>T, NG_012454.1:g.5151G>T, NG_012454.1:g.5151G>A, NM_023067.4:c.-268G>T, NM_023067.4:c.-268G>A, NM_023067.3:c.-268G>T, NM_023067.3:c.-268G>A

Select item 14878403937.

rs1487840393 has merged into rs1057516173 [Homo sapiens]

Variant type:: DELINS
Alleles:: GGCTGCAGCCGCAGCTGCTGCAGCCGC>-,GGCTGCAGCCGCAGCTGCTGCAGCCGCCGCGGCTGCAGCCGCAGCTGCTGCAGCCGC [Show Flanks]
Chromosome:: 3:138946024 (GRCh38)
3:138664866 (GRCh37)
Canonical SPDI:: NC_000003.12:138946019:CCGCGGCTGCAGCCGCAGCTGCTGCAGCCGC:CCGC,NC_000003.12:138946019:CCGCGGCTGCAGCCGCAGCTGCTGCAGCCGC:CCGCGGCTGCAGCCGCAGCTGCTGCAGCCGCCGCGGCTGCAGCCGCAGCTGCTGCAGCCGC
Gene:: FOXL2 (Varview), FOXL2NB (Varview), LINC01391 (Varview)
Functional Consequence:: inframe_deletion,upstream_transcript_variant,inframe_insertion,coding_sequence_variant,2KB_upstream_variant
Clinical significance:: pathogenic
Validated:: by frequency,by alfa
MAF:: CCGC=0./0 (ALFA)
HGVS:: NC_000003.12:g.138946024_138946050del, NC_000003.12:g.138946021_138946050dup, NC_000003.11:g.138664866_138664892del, NC_000003.11:g.138664863_138664892dup, NG_029796.1:g.3791_3817del, NG_029796.1:g.3788_3817dup, NG_012454.1:g.6095_6121del, NG_012454.1:g.6092_6121dup, NM_023067.4:c.677_703del, NM_023067.4:c.674_703dup, NM_023067.3:c.677_703del, NM_023067.3:c.674_703dup, NP_075555.1:p.Ala226_Ala234del, NP_075555.1:p.Ala225_Ala234dup

Select item 14875279508.

rs1487527950 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 3:138946465 (GRCh38)
3:138665307 (GRCh37)
Canonical SPDI:: NC_000003.12:138946464:C:G,NC_000003.12:138946464:C:T
Gene:: FOXL2 (Varview), FOXL2NB (Varview)
Functional Consequence:: coding_sequence_variant,upstream_transcript_variant,synonymous_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000003.12:g.138946465C>G, NC_000003.12:g.138946465C>T, NC_000003.11:g.138665307C>G, NC_000003.11:g.138665307C>T, NG_029796.1:g.4232C>G, NG_029796.1:g.4232C>T, NG_012454.1:g.5676G>C, NG_012454.1:g.5676G>A, NM_023067.4:c.258G>C, NM_023067.4:c.258G>A, NM_023067.3:c.258G>C, NM_023067.3:c.258G>A

Select item 14874123979.

rs1487412397 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 3:138948261 (GRCh38)
3:138667103 (GRCh37)
Canonical SPDI:: NC_000003.12:138948260:C:G
Gene:: FOXL2 (Varview), FOXL2NB (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0.0002/1 (ALFA)
G=0.0002/1 (Estonian)
HGVS:: NC_000003.12:g.138948261C>G, NC_000003.11:g.138667103C>G, NG_029796.1:g.6028C>G, NG_012454.1:g.3880G>C

Select item 148721605710.

rs1487216057 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:138944528 (GRCh38)
3:138663370 (GRCh37)
Canonical SPDI:: NC_000003.12:138944527:C:T
Gene:: FOXL2 (Varview), LINC01391 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.138944528C>T, NC_000003.11:g.138663370C>T, NG_029796.1:g.2295C>T, NG_012454.1:g.7613G>A, NM_023067.4:c.*1064G>A, NM_023067.3:c.*1064G>A

Select item 148705584911.

rs1487055849 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:138948342 (GRCh38)
3:138667184 (GRCh37)
Canonical SPDI:: NC_000003.12:138948341:G:A
Gene:: FOXL2 (Varview), FOXL2NB (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000003.12:g.138948342G>A, NC_000003.11:g.138667184G>A, NG_029796.1:g.6109G>A, NG_012454.1:g.3799C>T

Select item 148703747212.

rs1487037472 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:138947371 (GRCh38)
3:138666213 (GRCh37)
Canonical SPDI:: NC_000003.12:138947370:A:G
Gene:: FOXL2 (Varview), FOXL2NB (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,missense_variant,upstream_transcript_variant,5_prime_UTR_variant,genic_upstream_transcript_variant
HGVS:: NC_000003.12:g.138947371A>G, NC_000003.11:g.138666213A>G, NG_029796.1:g.5138A>G, NM_001040061.3:c.7A>G, NM_001040061.2:c.7A>G, NG_012454.1:g.4770T>C, XM_005247443.4:c.-154A>G, XM_005247443.3:c.-154A>G, XM_024453517.2:c.-253A>G, XM_024453517.1:c.-253A>G, XM_024453518.2:c.-336A>G, XM_024453518.1:c.-336A>G, NP_001035150.1:p.Arg3Gly

Select item 148699086213.

rs1486990862 [Homo sapiens]

Variant type:: DEL
Alleles:: TCAGCTATTGCACTAACACAGGCGGG>- [Show Flanks]
Chromosome:: 3:138947855 (GRCh38)
3:138666697 (GRCh37)
Canonical SPDI:: NC_000003.12:138947854:TCAGCTATTGCACTAACACAGGCGGG:
Gene:: FOXL2 (Varview), FOXL2NB (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: -=0.000253/3 (ALFA)
-=0.000242/34 (GnomAD)
HGVS:: NC_000003.12:g.138947855_138947880del, NC_000003.11:g.138666697_138666722del, NG_029796.1:g.5622_5647del, NG_012454.1:g.4261_4286del, XM_047448095.1:c.-312_-287del

Select item 148622546314.

rs1486225463 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACAA>- [Show Flanks]
Chromosome:: 3:138944059 (GRCh38)
3:138662901 (GRCh37)
Canonical SPDI:: NC_000003.12:138944052:AAACAAACAA:AAACAA
Gene:: FOXL2 (Varview), LINC01391 (Varview)
Functional Consequence:: upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAACAA=0./0 (ALFA)
-=0.000008/2 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000003.12:g.138944055ACAA[1], NC_000003.11:g.138662897ACAA[1], NG_029796.1:g.1822ACAA[1], NG_012454.1:g.8081GTTT[1]

Select item 148438382315.

rs1484383823 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 3:138948828 (GRCh38)
3:138667671 (GRCh37)
Canonical SPDI:: NC_000003.12:138948828:A:AA
Gene:: FOXL2 (Varview), FOXL2NB (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.138948829dup, NC_000003.11:g.138667671dup, NG_029796.1:g.6596dup, NG_012454.1:g.3312dup

Select item 148435076716.

rs1484350767 [Homo sapiens]

Variant type:: DELINS
Alleles:: CCT>- [Show Flanks]
Chromosome:: 3:138948137 (GRCh38)
3:138666979 (GRCh37)
Canonical SPDI:: NC_000003.12:138948134:CTCCT:CT
Gene:: FOXL2 (Varview), FOXL2NB (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: CT=0./0 (ALFA)
-=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.138948137_138948139del, NC_000003.11:g.138666979_138666981del, NG_029796.1:g.5904_5906del, NG_012454.1:g.4004_4006del

Select item 148371379817.

rs1483713798 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 3:138945019 (GRCh38)
3:138663861 (GRCh37)
Canonical SPDI:: NC_000003.12:138945018:C:A,NC_000003.12:138945018:C:T
Gene:: FOXL2 (Varview), LINC01391 (Varview)
Functional Consequence:: upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000023/6 (TOPMED)
HGVS:: NC_000003.12:g.138945019C>A, NC_000003.12:g.138945019C>T, NC_000003.11:g.138663861C>A, NC_000003.11:g.138663861C>T, NG_029796.1:g.2786C>A, NG_029796.1:g.2786C>T, NG_012454.1:g.7122G>T, NG_012454.1:g.7122G>A, NM_023067.4:c.*573G>T, NM_023067.4:c.*573G>A, NM_023067.3:c.*573G>T, NM_023067.3:c.*573G>A

Select item 148317768918.

rs1483177689 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 3:138947407 (GRCh38)
3:138666249 (GRCh37)
Canonical SPDI:: NC_000003.12:138947406:C:A
Gene:: FOXL2 (Varview), FOXL2NB (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,missense_variant,upstream_transcript_variant,5_prime_UTR_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000028/1 (ALFA)
A=0.000122/18 (GnomAD_exomes)
A=0.000291/77 (TOPMED)
A=0.000356/50 (GnomAD)
HGVS:: NC_000003.12:g.138947407C>A, NC_000003.11:g.138666249C>A, NG_029796.1:g.5174C>A, NM_001040061.3:c.43C>A, NM_001040061.2:c.43C>A, NG_012454.1:g.4734G>T, XM_005247443.4:c.-118C>A, XM_005247443.3:c.-118C>A, XM_024453517.2:c.-217C>A, XM_024453517.1:c.-217C>A, XM_024453518.2:c.-300C>A, XM_024453518.1:c.-300C>A, NP_001035150.1:p.Pro15Thr

Select item 148306131719.

rs1483061317 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:138944199 (GRCh38)
3:138663041 (GRCh37)
Canonical SPDI:: NC_000003.12:138944198:A:G
Gene:: FOXL2 (Varview), LINC01391 (Varview)
Functional Consequence:: upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.138944199A>G, NC_000003.11:g.138663041A>G, NG_029796.1:g.1966A>G, NG_012454.1:g.7942T>C

Select item 148248819020.

rs1482488190 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:138946442 (GRCh38)
3:138665284 (GRCh37)
Canonical SPDI:: NC_000003.12:138946441:T:C
Gene:: FOXL2 (Varview), FOXL2NB (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000003.12:g.138946442T>C, NC_000003.11:g.138665284T>C, NG_029796.1:g.4209T>C, NG_012454.1:g.5699A>G, NM_023067.4:c.281A>G, NM_023067.3:c.281A>G, NP_075555.1:p.Asn94Ser

<< First< Prev

Page of 72

Next >Last >>

dbSNP

Result Filters

Clinical Significance

Validation Status

Publication

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 1435

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity