SNP Links for Gene (Select 677805) - SNP

Links from Gene

Items: 1 to 20 of 781

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Select item 14906247451.

rs1490624745 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:93733510 (GRCh38)
11:93466676 (GRCh37)
Canonical SPDI:: NC_000011.10:93733509:G:A
Gene:: TAF1D (Varview), SNORA8 (Varview), SNORA1 (Varview), SNORA18 (Varview), SNORD5 (Varview), SNORD6 (Varview), MIR1304 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,500B_downstream_variant,non_coding_transcript_variant,intron_variant,2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.93733510G>A, NC_000011.9:g.93466676G>A, NR_002959.1:n.88C>T

Select item 14858797302.

rs1485879730 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:93733187 (GRCh38)
11:93466353 (GRCh37)
Canonical SPDI:: NC_000011.10:93733186:G:A,NC_000011.10:93733186:G:T
Gene:: TAF1D (Varview), SNORA8 (Varview), SNORA1 (Varview), SNORA18 (Varview), SNORD5 (Varview), SNORD6 (Varview), MIR1304 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,upstream_transcript_variant,intron_variant,2KB_upstream_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.93733187G>A, NC_000011.10:g.93733187G>T, NC_000011.9:g.93466353G>A, NC_000011.9:g.93466353G>T

Select item 14851284593.

rs1485128459 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:93734625 (GRCh38)
11:93467791 (GRCh37)
Canonical SPDI:: NC_000011.10:93734624:C:A
Gene:: TAF1D (Varview), SNORA18 (Varview), SNORA40 (Varview), SNORD5 (Varview), MIR1304 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.93734625C>A, NC_000011.9:g.93467791C>A, NR_146090.2:n.1094G>T, NR_146090.1:n.1136G>T, NR_146091.2:n.1094G>T, NR_146091.1:n.1136G>T

Select item 14828016414.

rs1482801641 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 11:93734283 (GRCh38)
11:93467449 (GRCh37)
Canonical SPDI:: NC_000011.10:93734282:T:C,NC_000011.10:93734282:T:G
Gene:: TAF1D (Varview), SNORA8 (Varview), SNORA18 (Varview), SNORD5 (Varview), MIR1304 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.93734283T>C, NC_000011.10:g.93734283T>G, NC_000011.9:g.93467449T>C, NC_000011.9:g.93467449T>G

Select item 14824185595.

rs1482418559 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:93735207 (GRCh38)
11:93468373 (GRCh37)
Canonical SPDI:: NC_000011.10:93735206:C:T
Gene:: TAF1D (Varview), SNORA18 (Varview), SNORA40 (Varview), SNORD5 (Varview), MIR1304 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant,downstream_transcript_variant,genic_downstream_transcript_variant
HGVS:: NC_000011.10:g.93735207C>T, NC_000011.9:g.93468373C>T, NR_002973.1:n.30G>A

Select item 14817958556.

rs1481795855 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:93733875 (GRCh38)
11:93467041 (GRCh37)
Canonical SPDI:: NC_000011.10:93733874:G:C
Gene:: TAF1D (Varview), SNORA8 (Varview), SNORA1 (Varview), SNORA18 (Varview), SNORD5 (Varview), MIR1304 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.93733875G>C, NC_000011.9:g.93467041G>C

Select item 14817045457.

rs1481704545 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:93733961 (GRCh38)
11:93467127 (GRCh37)
Canonical SPDI:: NC_000011.10:93733960:C:T
Gene:: TAF1D (Varview), SNORA8 (Varview), SNORA1 (Varview), SNORA18 (Varview), SNORD5 (Varview), MIR1304 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.93733961C>T, NC_000011.9:g.93467127C>T

Select item 14816250628.

rs1481625062 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 11:93733159 (GRCh38)
11:93466325 (GRCh37)
Canonical SPDI:: NC_000011.10:93733158:A:C,NC_000011.10:93733158:A:G
Gene:: TAF1D (Varview), SNORA8 (Varview), SNORA1 (Varview), SNORA18 (Varview), SNORD5 (Varview), SNORD6 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,genic_downstream_transcript_variant,upstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.93733159A>C, NC_000011.10:g.93733159A>G, NC_000011.9:g.93466325A>C, NC_000011.9:g.93466325A>G

Select item 14811696149.

rs1481169614 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:93732988 (GRCh38)
11:93466154 (GRCh37)
Canonical SPDI:: NC_000011.10:93732987:C:T
Gene:: TAF1D (Varview), SNORA8 (Varview), SNORA1 (Varview), SNORA18 (Varview), SNORA32 (Varview), SNORD5 (Varview), SNORD6 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,genic_downstream_transcript_variant,upstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.93732988C>T, NC_000011.9:g.93466154C>T

Select item 147751117710.

rs1477511177 [Homo sapiens]

Variant type:: INS
Alleles:: ->TCGAACTCCTGAGGTCAGGAGTTC [Show Flanks]
Chromosome:: 11:93735491 (GRCh38)
11:93468658 (GRCh37)
Canonical SPDI:: NC_000011.10:93735491::TCGAACTCCTGAGGTCAGGAGTTC
Gene:: TAF1D (Varview), SNORA18 (Varview), SNORA40 (Varview), MIR1304 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant,downstream_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency
MAF:: TCGAACTCCTGAGGTCAGGAGTTC=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.93735491_93735492insTCGAACTCCTGAGGTCAGGAGTTC, NC_000011.9:g.93468657_93468658insTCGAACTCCTGAGGTCAGGAGTTC

Select item 147643686511.

rs1476436865 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:93733675 (GRCh38)
11:93466841 (GRCh37)
Canonical SPDI:: NC_000011.10:93733674:G:C
Gene:: TAF1D (Varview), SNORA8 (Varview), SNORA1 (Varview), SNORA18 (Varview), SNORD5 (Varview), MIR1304 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
C=0.000021/4 (GnomAD_exomes)
HGVS:: NC_000011.10:g.93733675G>C, NC_000011.9:g.93466841G>C, NR_031639.1:n.90C>G

Select item 147552019612.

rs1475520196 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:93735088 (GRCh38)
11:93468254 (GRCh37)
Canonical SPDI:: NC_000011.10:93735087:C:A
Gene:: TAF1D (Varview), SNORA18 (Varview), SNORA40 (Varview), SNORD5 (Varview), MIR1304 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.93735088C>A, NC_000011.9:g.93468254C>A

Select item 147461068913.

rs1474610689 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:93735494 (GRCh38)
11:93468660 (GRCh37)
Canonical SPDI:: NC_000011.10:93735493:A:G
Gene:: TAF1D (Varview), SNORA18 (Varview), SNORA40 (Varview), MIR1304 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant,downstream_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00003/8 (TOPMED)
G=0.000036/5 (GnomAD)
HGVS:: NC_000011.10:g.93735494A>G, NC_000011.9:g.93468660A>G

Select item 147407873314.

rs1474078733 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:93734257 (GRCh38)
11:93467423 (GRCh37)
Canonical SPDI:: NC_000011.10:93734256:A:G
Gene:: TAF1D (Varview), SNORA8 (Varview), SNORA18 (Varview), SNORD5 (Varview), MIR1304 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.93734257A>G, NC_000011.9:g.93467423A>G

Select item 147309578715.

rs1473095787 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:93733864 (GRCh38)
11:93467030 (GRCh37)
Canonical SPDI:: NC_000011.10:93733863:A:G
Gene:: TAF1D (Varview), SNORA8 (Varview), SNORA1 (Varview), SNORA18 (Varview), SNORD5 (Varview), MIR1304 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000011.10:g.93733864A>G, NC_000011.9:g.93467030A>G

Select item 147148782316.

rs1471487823 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 11:93735069 (GRCh38)
11:93468235 (GRCh37)
Canonical SPDI:: NC_000011.10:93735068:T:C,NC_000011.10:93735068:T:G
Gene:: TAF1D (Varview), SNORA18 (Varview), SNORA40 (Varview), SNORD5 (Varview), MIR1304 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000043/1 (ALFA)
G=0.000005/1 (GnomAD_exomes)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.93735069T>C, NC_000011.10:g.93735069T>G, NC_000011.9:g.93468235T>C, NC_000011.9:g.93468235T>G

Select item 147146674517.

rs1471466745 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:93733537 (GRCh38)
11:93466703 (GRCh37)
Canonical SPDI:: NC_000011.10:93733536:T:C
Gene:: TAF1D (Varview), SNORA8 (Varview), SNORA1 (Varview), SNORA18 (Varview), SNORD5 (Varview), SNORD6 (Varview), MIR1304 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,non_coding_transcript_variant,500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.93733537T>C, NC_000011.9:g.93466703T>C, NR_002959.1:n.61A>G

Select item 147095571018.

rs1470955710 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:93734706 (GRCh38)
11:93467872 (GRCh37)
Canonical SPDI:: NC_000011.10:93734705:A:G
Gene:: TAF1D (Varview), SNORA18 (Varview), SNORA40 (Varview), SNORD5 (Varview), MIR1304 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,genic_downstream_transcript_variant,upstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.93734706A>G, NC_000011.9:g.93467872A>G

Select item 146890522419.

rs1468905224 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:93734696 (GRCh38)
11:93467862 (GRCh37)
Canonical SPDI:: NC_000011.10:93734695:A:G
Gene:: TAF1D (Varview), SNORA18 (Varview), SNORA40 (Varview), SNORD5 (Varview), MIR1304 (Varview)
Functional Consequence:: 500B_downstream_variant,genic_downstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000023/6 (TOPMED)
G=0.000031/4 (GnomAD_exomes)
HGVS:: NC_000011.10:g.93734696A>G, NC_000011.9:g.93467862A>G

Select item 146785516620.

rs1467855166 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 11:93734059 (GRCh38)
11:93467225 (GRCh37)
Canonical SPDI:: NC_000011.10:93734058:T:A
Gene:: TAF1D (Varview), SNORA8 (Varview), SNORA1 (Varview), SNORA18 (Varview), SNORD5 (Varview), MIR1304 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.93734059T>A, NC_000011.9:g.93467225T>A

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