SNP Links for Gene (Select 693142) - SNP

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Select item 14906345471.

rs1490634547 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:168375014 (GRCh38)
1:168344252 (GRCh37)
Canonical SPDI:: NC_000001.11:168375013:C:G
Gene:: MIR557 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000026/7 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000001.11:g.168375014C>G, NC_000001.10:g.168344252C>G

Select item 14884069332.

rs1488406933 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:168375445 (GRCh38)
1:168344683 (GRCh37)
Canonical SPDI:: NC_000001.11:168375444:G:A
Gene:: MIR557 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000756/14 (ALFA)
A=0.000019/5 (TOPMED)
A=0.000086/12 (GnomAD)
A=0.003125/14 (Estonian)
HGVS:: NC_000001.11:g.168375445G>A, NC_000001.10:g.168344683G>A

Select item 14874694623.

rs1487469462 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:168375708 (GRCh38)
1:168344946 (GRCh37)
Canonical SPDI:: NC_000001.11:168375707:G:T
Gene:: MIR557 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.168375708G>T, NC_000001.10:g.168344946G>T

Select item 14855029834.

rs1485502983 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:168374594 (GRCh38)
1:168343832 (GRCh37)
Canonical SPDI:: NC_000001.11:168374593:A:T
Gene:: MIR557 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.168374594A>T, NC_000001.10:g.168343832A>T

Select item 14854544475.

rs1485454447 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:168373627 (GRCh38)
1:168342865 (GRCh37)
Canonical SPDI:: NC_000001.11:168373626:A:G
Gene:: MIR557 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.168373627A>G, NC_000001.10:g.168342865A>G

Select item 14824018806.

rs1482401880 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:168374745 (GRCh38)
1:168343983 (GRCh37)
Canonical SPDI:: NC_000001.11:168374744:G:A
Gene:: MIR557 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.168374745G>A, NC_000001.10:g.168343983G>A

Select item 14812016807.

rs1481201680 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:168375693 (GRCh38)
1:168344931 (GRCh37)
Canonical SPDI:: NC_000001.11:168375692:T:C
Gene:: MIR557 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.168375693T>C, NC_000001.10:g.168344931T>C

Select item 14799509028.

rs1479950902 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:168374967 (GRCh38)
1:168344205 (GRCh37)
Canonical SPDI:: NC_000001.11:168374966:C:A,NC_000001.11:168374966:C:T
Gene:: MIR557 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000035/1 (TOMMO)
T=0.000057/15 (TOPMED)
T=0.000078/11 (GnomAD)
T=0.000684/2 (KOREAN)
HGVS:: NC_000001.11:g.168374967C>A, NC_000001.11:g.168374967C>T, NC_000001.10:g.168344205C>A, NC_000001.10:g.168344205C>T

Select item 14785914619.

rs1478591461 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:168374112 (GRCh38)
1:168343350 (GRCh37)
Canonical SPDI:: NC_000001.11:168374111:C:A
Gene:: MIR557 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.168374112C>A, NC_000001.10:g.168343350C>A

Select item 147846642110.

rs1478466421 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:168375120 (GRCh38)
1:168344358 (GRCh37)
Canonical SPDI:: NC_000001.11:168375119:G:A,NC_000001.11:168375119:G:C
Gene:: MIR557 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.168375120G>A, NC_000001.11:g.168375120G>C, NC_000001.10:g.168344358G>A, NC_000001.10:g.168344358G>C

Select item 147797774711.

rs1477977747 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 1:168375621 (GRCh38)
1:168344859 (GRCh37)
Canonical SPDI:: NC_000001.11:168375620:A:
Gene:: MIR557 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: -=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.168375621del, NC_000001.10:g.168344859del, NR_030284.1:n.98del

Select item 147662696012.

rs1476626960 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:168375273 (GRCh38)
1:168344511 (GRCh37)
Canonical SPDI:: NC_000001.11:168375272:G:A
Gene:: MIR557 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.168375273G>A, NC_000001.10:g.168344511G>A

Select item 147649765213.

rs1476497652 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:168374080 (GRCh38)
1:168343318 (GRCh37)
Canonical SPDI:: NC_000001.11:168374079:T:C
Gene:: MIR557 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.168374080T>C, NC_000001.10:g.168343318T>C

Select item 147271687214.

rs1472716872 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:168375588 (GRCh38)
1:168344826 (GRCh37)
Canonical SPDI:: NC_000001.11:168375587:G:A
Gene:: MIR557 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.168375588G>A, NC_000001.10:g.168344826G>A, NR_030284.1:n.65G>A

Select item 147238818515.

rs1472388185 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:168374985 (GRCh38)
1:168344223 (GRCh37)
Canonical SPDI:: NC_000001.11:168374984:C:T
Gene:: MIR557 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.168374985C>T, NC_000001.10:g.168344223C>T

Select item 147024953716.

rs1470249537 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:168374264 (GRCh38)
1:168343502 (GRCh37)
Canonical SPDI:: NC_000001.11:168374263:G:A
Gene:: MIR557 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.168374264G>A, NC_000001.10:g.168343502G>A

Select item 146964585217.

rs1469645852 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:168373705 (GRCh38)
1:168342943 (GRCh37)
Canonical SPDI:: NC_000001.11:168373704:G:C
Gene:: MIR557 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.168373705G>C, NC_000001.10:g.168342943G>C

Select item 146699893118.

rs1466998931 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:168376099 (GRCh38)
1:168345337 (GRCh37)
Canonical SPDI:: NC_000001.11:168376098:C:A
Gene:: MIR557 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.168376099C>A, NC_000001.10:g.168345337C>A

Select item 146596975919.

rs1465969759 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:168374856 (GRCh38)
1:168344094 (GRCh37)
Canonical SPDI:: NC_000001.11:168374855:G:A
Gene:: MIR557 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.168374856G>A, NC_000001.10:g.168344094G>A

Select item 146425534120.

rs1464255341 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:168374632 (GRCh38)
1:168343870 (GRCh37)
Canonical SPDI:: NC_000001.11:168374631:A:G
Gene:: MIR557 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.168374632A>G, NC_000001.10:g.168343870A>G

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