Links from Gene
Items: 1 to 20 of 609
1.
rs1490702943 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 3:171106183
(GRCh38)
3:170823972
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171106182:C:G
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- downstream_transcript_variant,intron_variant,genic_downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000011/3
(TOPMED)
G=0.000014/2
(GnomAD)
- HGVS:
2.
rs1489775883 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- C>-
[Show Flanks]
- Chromosome:
- 3:171107414
(GRCh38)
3:170825203
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171107413:CC:C
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,genic_downstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
CC=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
3.
rs1488469722 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 3:171107244
(GRCh38)
3:170825033
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171107243:A:G
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- intron_variant,2KB_upstream_variant,upstream_transcript_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.000071/1
(
ALFA)
G=0.000007/1
(GnomAD)
G=0.000008/2
(TOPMED)
G=0.00006/1
(TOMMO)
- HGVS:
4.
rs1487556531 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 3:171108384
(GRCh38)
3:170826173
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171108383:A:G
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- intron_variant,2KB_upstream_variant,upstream_transcript_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.000066/1
(
ALFA)
G=0.000014/2
(GnomAD)
G=0.000223/1
(Estonian)
- HGVS:
5.
rs1486802523 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 3:171107373
(GRCh38)
3:170825162
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171107372:T:C
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- intron_variant,2KB_upstream_variant,upstream_transcript_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0.000224/1
(
ALFA)
C=0.000007/1
(GnomAD)
C=0.000223/1
(Estonian)
- HGVS:
6.
rs1485577239 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 3:171108540
(GRCh38)
3:170826329
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171108539:C:T
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- intron_variant,2KB_upstream_variant,upstream_transcript_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000008/2
(TOPMED)
- HGVS:
7.
rs1485079022 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 3:171108197
(GRCh38)
3:170825986
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171108196:G:A
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- intron_variant,2KB_upstream_variant,upstream_transcript_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
8.
rs1484093068 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 3:171107728
(GRCh38)
3:170825517
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171107727:T:C
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,genic_downstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
9.
rs1483804009 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AG>-
[Show Flanks]
- Chromosome:
- 3:171108180
(GRCh38)
3:170825969
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171108177:AGAG:AG
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- intron_variant,2KB_upstream_variant,upstream_transcript_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
- Validated:
- by frequency
- MAF:
-=0.000007/1
(GnomAD_exomes)
- HGVS:
10.
rs1483611012 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- A>-
[Show Flanks]
- Chromosome:
- 3:171107630
(GRCh38)
3:170825419
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171107629:AAAA:AAA
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,genic_downstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
AAA=0./0
(
ALFA)
-=0.000008/2
(TOPMED)
- HGVS:
11.
rs1481623182 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>T
[Show Flanks]
- Chromosome:
- 3:171106562
(GRCh38)
3:170824351
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171106561:A:T
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- downstream_transcript_variant,genic_downstream_transcript_variant,500B_downstream_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000008/2
(TOPMED)
- HGVS:
12.
rs1481092504 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 3:171106304
(GRCh38)
3:170824093
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171106303:T:C
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- downstream_transcript_variant,genic_downstream_transcript_variant,500B_downstream_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000014/2
(GnomAD)
- HGVS:
13.
rs1480737037 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 3:171107068
(GRCh38)
3:170824857
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171107067:C:G
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.000447/2
(
ALFA)
G=0.000007/1
(GnomAD)
G=0.000446/2
(Estonian)
- HGVS:
14.
rs1480188919 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ATGG>-
[Show Flanks]
- Chromosome:
- 3:171108753
(GRCh38)
3:170826542
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171108751:GATGG:G
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
15.
rs1478303410 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 3:171106947
(GRCh38)
3:170824736
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171106946:C:T
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
16.
rs1478113534 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C
[Show Flanks]
- Chromosome:
- 3:171107136
(GRCh38)
3:170824925
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171107135:A:C
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(GnomAD_exomes)
C=0.000004/1
(TOPMED)
- HGVS:
17.
rs1474243671 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 3:171108190
(GRCh38)
3:170825979
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171108189:A:G
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- upstream_transcript_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000015/4
(TOPMED)
- HGVS:
18.
rs1472599212 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->T
[Show Flanks]
- Chromosome:
- 3:171107389
(GRCh38)
3:170825179
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171107389:TTT:TTTT
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTT=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000008/2
(TOPMED)
- HGVS:
19.
rs1471614511 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 3:171106850
(GRCh38)
3:170824639
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171106849:A:G
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000008/2
(TOPMED)
G=0.000318/5
(TOMMO)
G=0.000342/1
(KOREAN)
- HGVS:
20.
rs1470346261 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 3:171106169
(GRCh38)
3:170823958
(GRCh37)
- Canonical SPDI:
- NC_000003.12:171106168:C:G
- Gene:
- TNIK (Varview), MIR569 (Varview), LOC105374216 (Varview)
- Functional Consequence:
- intron_variant,500B_downstream_variant,downstream_transcript_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
G=0.000015/4
(TOPMED)
- HGVS: