SNP Links for Gene (Select 693171) - SNP

Links from Gene

Items: 1 to 20 of 548

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Select item 14894734231.

rs1489473423 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:45198139 (GRCh38)
6:45165876 (GRCh37)
Canonical SPDI:: NC_000006.12:45198138:C:T
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.45198139C>T, NC_000006.11:g.45165876C>T

Select item 14872207402.

rs1487220740 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 6:45197739 (GRCh38)
6:45165476 (GRCh37)
Canonical SPDI:: NC_000006.12:45197738:T:A
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
HGVS:: NC_000006.12:g.45197739T>A, NC_000006.11:g.45165476T>A, NR_030313.1:n.32A>T

Select item 14835565753.

rs1483556575 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:45199376 (GRCh38)
6:45167113 (GRCh37)
Canonical SPDI:: NC_000006.12:45199375:T:C
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.45199376T>C, NC_000006.11:g.45167113T>C

Select item 14829499174.

rs1482949917 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 6:45198343 (GRCh38)
6:45166080 (GRCh37)
Canonical SPDI:: NC_000006.12:45198342:T:A
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000006.12:g.45198343T>A, NC_000006.11:g.45166080T>A

Select item 14826994025.

rs1482699402 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 6:45197561 (GRCh38)
6:45165298 (GRCh37)
Canonical SPDI:: NC_000006.12:45197560:A:C
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000022/3 (GnomAD)
HGVS:: NC_000006.12:g.45197561A>C, NC_000006.11:g.45165298A>C

Select item 14820534896.

rs1482053489 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:45199579 (GRCh38)
6:45167316 (GRCh37)
Canonical SPDI:: NC_000006.12:45199578:C:T
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.45199579C>T, NC_000006.11:g.45167316C>T

Select item 14801465667.

rs1480146566 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: 6:45199467 (GRCh38)
6:45167204 (GRCh37)
Canonical SPDI:: NC_000006.12:45199466:TTT:TT
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.45199469del, NC_000006.11:g.45167206del

Select item 14780852718.

rs1478085271 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:45198771 (GRCh38)
6:45166508 (GRCh37)
Canonical SPDI:: NC_000006.12:45198770:G:A
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.45198771G>A, NC_000006.11:g.45166508G>A

Select item 14754217459.

rs1475421745 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 6:45199486 (GRCh38)
6:45167224 (GRCh37)
Canonical SPDI:: NC_000006.12:45199486:G:GG
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
G=0.000181/25 (GnomAD)
HGVS:: NC_000006.12:g.45199487dup, NC_000006.11:g.45167224dup

Select item 147362160110.

rs1473621601 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:45199076 (GRCh38)
6:45166813 (GRCh37)
Canonical SPDI:: NC_000006.12:45199075:G:A
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.45199076G>A, NC_000006.11:g.45166813G>A

Select item 147291840911.

rs1472918409 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:45198330 (GRCh38)
6:45166067 (GRCh37)
Canonical SPDI:: NC_000006.12:45198329:C:T
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.45198330C>T, NC_000006.11:g.45166067C>T

Select item 147249499312.

rs1472494993 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:45198231 (GRCh38)
6:45165968 (GRCh37)
Canonical SPDI:: NC_000006.12:45198230:T:C
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000671/3 (ALFA)
C=0.000014/2 (GnomAD)
C=0.00067/3 (Estonian)
HGVS:: NC_000006.12:g.45198231T>C, NC_000006.11:g.45165968T>C

Select item 147155131213.

rs1471551312 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:45198920 (GRCh38)
6:45166657 (GRCh37)
Canonical SPDI:: NC_000006.12:45198919:C:T
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.45198920C>T, NC_000006.11:g.45166657C>T

Select item 147134554114.

rs1471345541 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 6:45198481 (GRCh38)
6:45166218 (GRCh37)
Canonical SPDI:: NC_000006.12:45198480:T:C,NC_000006.12:45198480:T:G
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.45198481T>C, NC_000006.12:g.45198481T>G, NC_000006.11:g.45166218T>C, NC_000006.11:g.45166218T>G

Select item 147128743815.

rs1471287438 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 6:45197856 (GRCh38)
6:45165593 (GRCh37)
Canonical SPDI:: NC_000006.12:45197855:T:A
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.45197856T>A, NC_000006.11:g.45165593T>A

Select item 146963432316.

rs1469634323 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:45197940 (GRCh38)
6:45165677 (GRCh37)
Canonical SPDI:: NC_000006.12:45197939:A:G
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: 2KB_upstream_variant,genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.45197940A>G, NC_000006.11:g.45165677A>G

Select item 146855971217.

rs1468559712 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:45197505 (GRCh38)
6:45165242 (GRCh37)
Canonical SPDI:: NC_000006.12:45197504:G:T
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: 500B_downstream_variant,genic_upstream_transcript_variant,downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.45197505G>T, NC_000006.11:g.45165242G>T

Select item 146362360018.

rs1463623600 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:45197987 (GRCh38)
6:45165724 (GRCh37)
Canonical SPDI:: NC_000006.12:45197986:T:C
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: upstream_transcript_variant,genic_upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.45197987T>C, NC_000006.11:g.45165724T>C

Select item 146355533719.

rs1463555337 [Homo sapiens]

Variant type:: DEL
Alleles:: C>- [Show Flanks]
Chromosome:: 6:45199271 (GRCh38)
6:45167008 (GRCh37)
Canonical SPDI:: NC_000006.12:45199270:C:
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: upstream_transcript_variant,genic_upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.000071/1 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.45199271del, NC_000006.11:g.45167008del

Select item 146321635520.

rs1463216355 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:45199385 (GRCh38)
6:45167122 (GRCh37)
Canonical SPDI:: NC_000006.12:45199384:A:G
Gene:: SUPT3H (Varview), MIR586 (Varview)
Functional Consequence:: upstream_transcript_variant,genic_upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.45199385A>G, NC_000006.11:g.45167122A>G

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