SNP Links for Gene (Select 693173) - SNP

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Select item 14907452441.

rs1490745244 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 6:126484967 (GRCh38)
6:126806113 (GRCh37)
Canonical SPDI:: NC_000006.12:126484966:T:C,NC_000006.12:126484966:T:G
Gene:: MIR588 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000006.12:g.126484967T>C, NC_000006.12:g.126484967T>G, NC_000006.11:g.126806113T>C, NC_000006.11:g.126806113T>G

Select item 14907108572.

rs1490710857 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 6:126483789 (GRCh38)
6:126804935 (GRCh37)
Canonical SPDI:: NC_000006.12:126483788:T:A
Gene:: CENPW (Varview), MIR588 (Varview)
Functional Consequence:: downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.126483789T>A, NC_000006.11:g.126804935T>A

Select item 14898947193.

rs1489894719 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:126484310 (GRCh38)
6:126805456 (GRCh37)
Canonical SPDI:: NC_000006.12:126484309:A:G
Gene:: MIR588 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000021/3 (GnomAD)
G=0.00003/8 (TOPMED)
HGVS:: NC_000006.12:g.126484310A>G, NC_000006.11:g.126805456A>G

Select item 14876574154.

rs1487657415 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:126484571 (GRCh38)
6:126805717 (GRCh37)
Canonical SPDI:: NC_000006.12:126484570:A:G
Gene:: MIR588 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.126484571A>G, NC_000006.11:g.126805717A>G

Select item 14868099705.

rs1486809970 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:126484284 (GRCh38)
6:126805430 (GRCh37)
Canonical SPDI:: NC_000006.12:126484283:C:T
Gene:: MIR588 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000021/3 (GnomAD)
T=0.00003/8 (TOPMED)
HGVS:: NC_000006.12:g.126484284C>T, NC_000006.11:g.126805430C>T

Select item 14859657296.

rs1485965729 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 6:126484208 (GRCh38)
6:126805354 (GRCh37)
Canonical SPDI:: NC_000006.12:126484207:A:G,NC_000006.12:126484207:A:T
Gene:: MIR588 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000023/6 (TOPMED)
T=0.000035/1 (TOMMO)
G=0.000072/10 (GnomAD)
HGVS:: NC_000006.12:g.126484208A>G, NC_000006.12:g.126484208A>T, NC_000006.11:g.126805354A>G, NC_000006.11:g.126805354A>T

Select item 14859297457.

rs1485929745 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 6:126484859 (GRCh38)
6:126806005 (GRCh37)
Canonical SPDI:: NC_000006.12:126484858:A:T
Gene:: MIR588 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.126484859A>T, NC_000006.11:g.126806005A>T

Select item 14844408458.

rs1484440845 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:126483474 (GRCh38)
6:126804620 (GRCh37)
Canonical SPDI:: NC_000006.12:126483473:T:C
Gene:: CENPW (Varview), MIR588 (Varview)
Functional Consequence:: downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.126483474T>C, NC_000006.11:g.126804620T>C

Select item 14828567629.

rs1482856762 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 6:126484505 (GRCh38)
6:126805651 (GRCh37)
Canonical SPDI:: NC_000006.12:126484504:C:A,NC_000006.12:126484504:C:T
Gene:: MIR588 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.126484505C>A, NC_000006.12:g.126484505C>T, NC_000006.11:g.126805651C>A, NC_000006.11:g.126805651C>T

Select item 148279680910.

rs1482796809 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 6:126483222 (GRCh38)
6:126804368 (GRCh37)
Canonical SPDI:: NC_000006.12:126483221:G:A,NC_000006.12:126483221:G:T
Gene:: CENPW (Varview), MIR588 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000029/4 (GnomAD)
T=0.000053/14 (TOPMED)
HGVS:: NC_000006.12:g.126483222G>A, NC_000006.12:g.126483222G>T, NC_000006.11:g.126804368G>A, NC_000006.11:g.126804368G>T, NR_104462.2:n.3119G>A, NR_104462.2:n.3119G>T, NR_104462.1:n.3445G>A, NR_104462.1:n.3445G>T

Select item 148147702211.

rs1481477022 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:126485011 (GRCh38)
6:126806157 (GRCh37)
Canonical SPDI:: NC_000006.12:126485010:G:A
Gene:: MIR588 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000066/1 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000223/1 (Estonian)
HGVS:: NC_000006.12:g.126485011G>A, NC_000006.11:g.126806157G>A

Select item 148125275012.

rs1481252750 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:126483517 (GRCh38)
6:126804663 (GRCh37)
Canonical SPDI:: NC_000006.12:126483516:A:G
Gene:: CENPW (Varview), MIR588 (Varview)
Functional Consequence:: downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000054/1 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
G=0.000223/1 (Estonian)
HGVS:: NC_000006.12:g.126483517A>G, NC_000006.11:g.126804663A>G

Select item 148115531013.

rs1481155310 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:126485075 (GRCh38)
6:126806221 (GRCh37)
Canonical SPDI:: NC_000006.12:126485074:G:A
Gene:: MIR588 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000006.12:g.126485075G>A, NC_000006.11:g.126806221G>A

Select item 148108410314.

rs1481084103 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:126483361 (GRCh38)
6:126804507 (GRCh37)
Canonical SPDI:: NC_000006.12:126483360:A:G
Gene:: CENPW (Varview), MIR588 (Varview)
Functional Consequence:: downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.126483361A>G, NC_000006.11:g.126804507A>G

Select item 147748691015.

rs1477486910 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:126484242 (GRCh38)
6:126805388 (GRCh37)
Canonical SPDI:: NC_000006.12:126484241:A:G
Gene:: MIR588 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.126484242A>G, NC_000006.11:g.126805388A>G

Select item 147468827316.

rs1474688273 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:126484913 (GRCh38)
6:126806059 (GRCh37)
Canonical SPDI:: NC_000006.12:126484912:G:A
Gene:: MIR588 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.126484913G>A, NC_000006.11:g.126806059G>A

Select item 147445215617.

rs1474452156 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 6:126482655 (GRCh38)
6:126803801 (GRCh37)
Canonical SPDI:: NC_000006.12:126482654:T:C,NC_000006.12:126482654:T:G
Gene:: CENPW (Varview), MIR588 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00007/1 (ALFA)
HGVS:: NC_000006.12:g.126482655T>C, NC_000006.12:g.126482655T>G, NC_000006.11:g.126803801T>C, NC_000006.11:g.126803801T>G, NR_104462.2:n.2552T>C, NR_104462.2:n.2552T>G, NR_104462.1:n.2878T>C, NR_104462.1:n.2878T>G

Select item 147223086118.

rs1472230861 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:126482890 (GRCh38)
6:126804036 (GRCh37)
Canonical SPDI:: NC_000006.12:126482889:G:T
Gene:: CENPW (Varview), MIR588 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.126482890G>T, NC_000006.11:g.126804036G>T, NR_104462.2:n.2787G>T, NR_104462.1:n.3113G>T

Select item 147122127219.

rs1471221272 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:126482747 (GRCh38)
6:126803893 (GRCh37)
Canonical SPDI:: NC_000006.12:126482746:T:C
Gene:: CENPW (Varview), MIR588 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.126482747T>C, NC_000006.11:g.126803893T>C, NR_104462.2:n.2644T>C, NR_104462.1:n.2970T>C

Select item 147059720620.

rs1470597206 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:126484018 (GRCh38)
6:126805164 (GRCh37)
Canonical SPDI:: NC_000006.12:126484017:G:T
Gene:: MIR588 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.126484018G>T, NC_000006.11:g.126805164G>T

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