SNP Links for Gene (Select 7584) - SNP

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Select item 14909568261.

rs1490956826 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:44657364 (GRCh38)
3:44698856 (GRCh37)
Canonical SPDI:: NC_000003.12:44657363:T:C
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.44657364T>C, NC_000003.11:g.44698856T>C, NW_009646197.1:g.182718T>C

Select item 14909316942.

rs1490931694 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 3:44659732 (GRCh38)
3:44701224 (GRCh37)
Canonical SPDI:: NC_000003.12:44659731:T:A
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,intron_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000003.12:g.44659732T>A, NC_000003.11:g.44701224T>A, NW_009646197.1:g.185086T>A, NM_003420.4:c.1369T>A, NM_003420.3:c.1369T>A, XM_047448870.1:c.1369T>A, XM_047448866.1:c.1369T>A, XM_047448869.1:c.1369T>A, XM_047448867.1:c.1369T>A, XM_047448868.1:c.1369T>A, NP_003411.3:p.Cys457Ser, XP_047304826.1:p.Cys457Ser, XP_047304822.1:p.Cys457Ser, XP_047304825.1:p.Cys457Ser, XP_047304823.1:p.Cys457Ser, XP_047304824.1:p.Cys457Ser

Select item 14907425993.

rs1490742599 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:44648464 (GRCh38)
3:44689956 (GRCh37)
Canonical SPDI:: NC_000003.12:44648463:G:A
Gene:: ZNF35 (Varview), ZNF197 (Varview), ZNF660-ZNF197 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,3_prime_UTR_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.44648464G>A, NC_000003.11:g.44689956G>A, NW_009646197.1:g.173818G>A, NM_006991.5:c.*4244G>A, NM_006991.4:c.*4244G>A, NM_001024855.3:c.*1939G>A, NM_001024855.2:c.*1939G>A, NM_001024855.1:c.*1939G>A, NM_001323293.2:c.*4244G>A, NM_001323293.1:c.*4244G>A, NM_001323296.2:c.*4244G>A, NM_001323296.1:c.*4244G>A, NR_147691.2:n.3110G>A, NR_147691.1:n.3224G>A, NR_136582.2:n.3065G>A, NM_001351735.2:c.*1939G>A, NM_001351735.1:c.*1939G>A, NM_001351734.2:c.*1939G>A, NM_001351734.1:c.*1939G>A, NM_001323294.2:c.*1939G>A, NM_001323294.1:c.*1939G>A, NR_147692.2:n.7701G>A, NR_147692.1:n.7815G>A, NM_001323295.2:c.*4244G>A, NM_001323295.1:c.*4244G>A, NM_001351733.2:c.*4244G>A, NM_001351733.1:c.*4244G>A, NM_001351732.2:c.*4244G>A, NM_001351732.1:c.*4244G>A

Select item 14905905164.

rs1490590516 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:44647068 (GRCh38)
3:44688560 (GRCh37)
Canonical SPDI:: NC_000003.12:44647067:A:G
Gene:: ZNF35 (Varview), ZNF197 (Varview), ZNF660-ZNF197 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,3_prime_UTR_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000003.12:g.44647068A>G, NC_000003.11:g.44688560A>G, NW_009646197.1:g.172422A>G, NM_006991.5:c.*2848A>G, NM_006991.4:c.*2848A>G, NM_001024855.3:c.*543A>G, NM_001024855.2:c.*543A>G, NM_001024855.1:c.*543A>G, NR_147692.2:n.6305A>G, NR_147692.1:n.6419A>G, NM_001351733.2:c.*2848A>G, NM_001351733.1:c.*2848A>G, NM_001351732.2:c.*2848A>G, NM_001351732.1:c.*2848A>G, NM_001323293.2:c.*2848A>G, NM_001323293.1:c.*2848A>G, NM_001323296.2:c.*2848A>G, NM_001323296.1:c.*2848A>G, NR_147691.2:n.1714A>G, NR_147691.1:n.1828A>G, NR_136582.2:n.1669A>G, NR_136582.1:n.1686A>G, NM_001351735.2:c.*543A>G, NM_001351735.1:c.*543A>G, NM_001351734.2:c.*543A>G, NM_001351734.1:c.*543A>G, NM_001323294.2:c.*543A>G, NM_001323294.1:c.*543A>G, NM_001323295.2:c.*2848A>G, NM_001323295.1:c.*2848A>G

Select item 14905443745.

rs1490544374 [Homo sapiens]

Variant type:: DELINS
Alleles:: GCAA>- [Show Flanks]
Chromosome:: 3:44649987 (GRCh38)
3:44691479 (GRCh37)
Canonical SPDI:: NC_000003.12:44649984:AAGCAA:AA
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
-=0.000034/9 (TOPMED)
-=0.000036/5 (GnomAD)
HGVS:: NC_000003.12:g.44649987_44649990del, NC_000003.11:g.44691479_44691482del, NW_009646197.1:g.175341_175344del

Select item 14904778236.

rs1490477823 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:44649372 (GRCh38)
3:44690864 (GRCh37)
Canonical SPDI:: NC_000003.12:44649371:A:G
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000285/4 (ALFA)
G=0.000019/5 (TOPMED)
G=0.000036/5 (GnomAD)
HGVS:: NC_000003.12:g.44649372A>G, NC_000003.11:g.44690864A>G, NW_009646197.1:g.174726A>G

Select item 14902136187.

rs1490213618 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:44649162 (GRCh38)
3:44690654 (GRCh37)
Canonical SPDI:: NC_000003.12:44649161:G:A
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.44649162G>A, NC_000003.11:g.44690654G>A, NW_009646197.1:g.174516G>A

Select item 14901381278.

rs1490138127 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:44656748 (GRCh38)
3:44698240 (GRCh37)
Canonical SPDI:: NC_000003.12:44656747:A:G
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.44656748A>G, NC_000003.11:g.44698240A>G, NW_009646197.1:g.182102A>G

Select item 14896039259.

rs1489603925 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CCTGTCCG [Show Flanks]
Chromosome:: 3:44648730 (GRCh38)
3:44690223 (GRCh37)
Canonical SPDI:: NC_000003.12:44648730:CCTGTCCG:CCTGTCCGCCTGTCCG
Gene:: ZNF35 (Varview), ZNF197 (Varview), ZNF660-ZNF197 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,genic_upstream_transcript_variant,upstream_transcript_variant,5_prime_UTR_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: CCTGTCCGCCTGTCCG=0./0 (ALFA)
CCTGTCCG=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.44648731_44648738dup, NC_000003.11:g.44690223_44690230dup, NW_009646197.1:g.174085_174092dup

Select item 148950590010.

rs1489505900 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTAA>- [Show Flanks]
Chromosome:: 3:44653188 (GRCh38)
3:44694680 (GRCh37)
Canonical SPDI:: NC_000003.12:44653183:TTAATTTAA:TTAA
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTAA=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000015/4 (TOPMED)
HGVS:: NC_000003.12:g.44653188_44653192del, NC_000003.11:g.44694680_44694684del, NW_009646197.1:g.178542_178546del

Select item 148936517511.

rs1489365175 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:44655742 (GRCh38)
3:44697234 (GRCh37)
Canonical SPDI:: NC_000003.12:44655741:C:T
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.44655742C>T, NC_000003.11:g.44697234C>T, NW_009646197.1:g.181096C>T

Select item 148894458912.

rs1488944589 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 3:44647724 (GRCh38)
3:44689216 (GRCh37)
Canonical SPDI:: NC_000003.12:44647723:C:A,NC_000003.12:44647723:C:G
Gene:: ZNF35 (Varview), ZNF197 (Varview), ZNF660-ZNF197 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,3_prime_UTR_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000003.12:g.44647724C>A, NC_000003.12:g.44647724C>G, NC_000003.11:g.44689216C>A, NC_000003.11:g.44689216C>G, NW_009646197.1:g.173078C>A, NW_009646197.1:g.173078C>G, NM_006991.5:c.*3504C>A, NM_006991.5:c.*3504C>G, NM_006991.4:c.*3504C>A, NM_006991.4:c.*3504C>G, NM_001024855.3:c.*1199C>A, NM_001024855.3:c.*1199C>G, NM_001024855.2:c.*1199C>A, NM_001024855.2:c.*1199C>G, NM_001024855.1:c.*1199C>A, NM_001024855.1:c.*1199C>G, NM_001351733.2:c.*3504C>A, NM_001351733.2:c.*3504C>G, NM_001351733.1:c.*3504C>A, NM_001351733.1:c.*3504C>G, NM_001351732.2:c.*3504C>A, NM_001351732.2:c.*3504C>G, NM_001351732.1:c.*3504C>A, NM_001351732.1:c.*3504C>G, NM_001323293.2:c.*3504C>A, NM_001323293.2:c.*3504C>G, NM_001323293.1:c.*3504C>A, NM_001323293.1:c.*3504C>G, NM_001323296.2:c.*3504C>A, NM_001323296.2:c.*3504C>G, NM_001323296.1:c.*3504C>A, NM_001323296.1:c.*3504C>G, NR_147691.2:n.2370C>A, NR_147691.2:n.2370C>G, NR_147691.1:n.2484C>A, NR_147691.1:n.2484C>G, NR_136582.2:n.2325C>A, NR_136582.2:n.2325C>G, NR_136582.1:n.2342C>A, NR_136582.1:n.2342C>G, NM_001351735.2:c.*1199C>A, NM_001351735.2:c.*1199C>G, NM_001351735.1:c.*1199C>A, NM_001351735.1:c.*1199C>G, NM_001351734.2:c.*1199C>A, NM_001351734.2:c.*1199C>G, NM_001351734.1:c.*1199C>A, NM_001351734.1:c.*1199C>G, NM_001323294.2:c.*1199C>A, NM_001323294.2:c.*1199C>G, NM_001323294.1:c.*1199C>A, NM_001323294.1:c.*1199C>G, NM_001323295.2:c.*3504C>A, NM_001323295.2:c.*3504C>G, NM_001323295.1:c.*3504C>A, NM_001323295.1:c.*3504C>G, NR_147692.2:n.6961C>A, NR_147692.2:n.6961C>G, NR_147692.1:n.7075C>A, NR_147692.1:n.7075C>G

Select item 148892538413.

rs1488925384 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 3:44648194 (GRCh38)
3:44689686 (GRCh37)
Canonical SPDI:: NC_000003.12:44648193:T:A
Gene:: ZNF35 (Varview), ZNF197 (Varview), ZNF660-ZNF197 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,3_prime_UTR_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000003.12:g.44648194T>A, NC_000003.11:g.44689686T>A, NW_009646197.1:g.173548T>A, NM_006991.5:c.*3974T>A, NM_006991.4:c.*3974T>A, NM_001024855.3:c.*1669T>A, NM_001024855.2:c.*1669T>A, NM_001024855.1:c.*1669T>A, NM_001323293.2:c.*3974T>A, NM_001323293.1:c.*3974T>A, NM_001323296.2:c.*3974T>A, NM_001323296.1:c.*3974T>A, NR_147691.2:n.2840T>A, NR_147691.1:n.2954T>A, NR_136582.2:n.2795T>A, NM_001351735.2:c.*1669T>A, NM_001351735.1:c.*1669T>A, NM_001351734.2:c.*1669T>A, NM_001351734.1:c.*1669T>A, NM_001323294.2:c.*1669T>A, NM_001323294.1:c.*1669T>A, NR_147692.2:n.7431T>A, NR_147692.1:n.7545T>A, NM_001323295.2:c.*3974T>A, NM_001323295.1:c.*3974T>A, NM_001351733.2:c.*3974T>A, NM_001351733.1:c.*3974T>A, NM_001351732.2:c.*3974T>A, NM_001351732.1:c.*3974T>A

Select item 148885117814.

rs1488851178 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:44656364 (GRCh38)
3:44697856 (GRCh37)
Canonical SPDI:: NC_000003.12:44656363:A:G
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000142/2 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000023/6 (TOPMED)
HGVS:: NC_000003.12:g.44656364A>G, NC_000003.11:g.44697856A>G, NW_009646197.1:g.181718A>G

Select item 148877319715.

rs1488773197 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 3:44658652 (GRCh38)
3:44700144 (GRCh37)
Canonical SPDI:: NC_000003.12:44658651:T:A
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000029/4 (GnomAD)
HGVS:: NC_000003.12:g.44658652T>A, NC_000003.11:g.44700144T>A, NW_009646197.1:g.184006T>A

Select item 148877149916.

rs1488771499 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:44651977 (GRCh38)
3:44693469 (GRCh37)
Canonical SPDI:: NC_000003.12:44651976:G:A
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
HGVS:: NC_000003.12:g.44651977G>A, NC_000003.11:g.44693469G>A, NW_009646197.1:g.177331G>A

Select item 148873633417.

rs1488736334 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 3:44658158 (GRCh38)
3:44699650 (GRCh37)
Canonical SPDI:: NC_000003.12:44658157:G:C
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: C=0.0071/13 (Korea1K)
HGVS:: NC_000003.12:g.44658158G>C, NC_000003.11:g.44699650G>C, NW_009646197.1:g.183512G>C

Select item 148851608218.

rs1488516082 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:44655069 (GRCh38)
3:44696561 (GRCh37)
Canonical SPDI:: NC_000003.12:44655068:G:A
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.44655069G>A, NC_000003.11:g.44696561G>A, NW_009646197.1:g.180423G>A

Select item 148847413919.

rs1488474139 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:44650005 (GRCh38)
3:44691497 (GRCh37)
Canonical SPDI:: NC_000003.12:44650004:A:G
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.44650005A>G, NC_000003.11:g.44691497A>G, NW_009646197.1:g.175359A>G

Select item 148828236220.

rs1488282362 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:44654090 (GRCh38)
3:44695582 (GRCh37)
Canonical SPDI:: NC_000003.12:44654089:G:A
Gene:: ZNF35 (Varview), ZKSCAN7-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.44654090G>A, NC_000003.11:g.44695582G>A, NW_009646197.1:g.179444G>A

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