SNP Links for Gene (Select 7763) - SNP

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Select item 14913704961.

rs1491370496 has merged into rs869140563 [Homo sapiens]

Variant type:: DELINS
Alleles:: CG>-,CGCG [Show Flanks]
Chromosome:: 9:72365302 (GRCh38)
9:74980218 (GRCh37)
Canonical SPDI:: NC_000009.12:72365300:GCG:G,NC_000009.12:72365300:GCG:GCGCG
Gene:: ZFAND5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: -=0.000021/3 (GnomAD)
-=0.000156/1 (1000Genomes)
HGVS:: NC_000009.12:g.72365302_72365303del, NC_000009.12:g.72365302_72365303dup, NC_000009.11:g.74980218_74980219del, NC_000009.11:g.74980218_74980219dup

Select item 14910815362.

rs1491081536 has merged into rs34407229 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 9:72356832 (GRCh38)
9:74971748 (GRCh37)
Canonical SPDI:: NC_000009.12:72356823:TTTTTTTTTTTTTTT:TTTTTTTT,NC_000009.12:72356823:TTTTTTTTTTTTTTT:TTTTTTTTT,NC_000009.12:72356823:TTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000009.12:72356823:TTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000009.12:72356823:TTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000009.12:72356823:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000009.12:72356823:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000009.12:72356823:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000009.12:72356823:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000009.12:72356823:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT
Gene:: ZFAND5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTT=0./0 (ALFA)
-=0.2115/66 (1000Genomes)
HGVS:: NC_000009.12:g.72356832_72356838del, NC_000009.12:g.72356833_72356838del, NC_000009.12:g.72356834_72356838del, NC_000009.12:g.72356835_72356838del, NC_000009.12:g.72356836_72356838del, NC_000009.12:g.72356837_72356838del, NC_000009.12:g.72356838del, NC_000009.12:g.72356838dup, NC_000009.12:g.72356835_72356838dup, NC_000009.12:g.72356832_72356838dup, NC_000009.11:g.74971748_74971754del, NC_000009.11:g.74971749_74971754del, NC_000009.11:g.74971750_74971754del, NC_000009.11:g.74971751_74971754del, NC_000009.11:g.74971752_74971754del, NC_000009.11:g.74971753_74971754del, NC_000009.11:g.74971754del, NC_000009.11:g.74971754dup, NC_000009.11:g.74971751_74971754dup, NC_000009.11:g.74971748_74971754dup

Select item 14910639793.

rs1491063979 has merged into rs4069939 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAA>-,A,AA,AAA,AAAAA [Show Flanks]
Chromosome:: 9:72366679 (GRCh38)
9:74981595 (GRCh37)
Canonical SPDI:: NC_000009.12:72366666:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000009.12:72366666:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000009.12:72366666:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000009.12:72366666:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000009.12:72366666:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA
Gene:: ZFAND5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAA=0./0 (ALFA)
AA=0./0 (GENOME_DK)
AA=0.0292/146 (1000Genomes)
HGVS:: NC_000009.12:g.72366679_72366682del, NC_000009.12:g.72366680_72366682del, NC_000009.12:g.72366681_72366682del, NC_000009.12:g.72366682del, NC_000009.12:g.72366682dup, NC_000009.11:g.74981595_74981598del, NC_000009.11:g.74981596_74981598del, NC_000009.11:g.74981597_74981598del, NC_000009.11:g.74981598del, NC_000009.11:g.74981598dup

Select item 14908818494.

rs1490881849 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 9:72359007 (GRCh38)
9:74973923 (GRCh37)
Canonical SPDI:: NC_000009.12:72359006:CA:
Gene:: ZFAND5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000026/7 (TOPMED)
-=0.000036/5 (GnomAD)
HGVS:: NC_000009.12:g.72359007_72359008del, NC_000009.11:g.74973923_74973924del

Select item 14908505295.

rs1490850529 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 9:72356839 (GRCh38)
9:74971755 (GRCh37)
Canonical SPDI:: NC_000009.12:72356838:A:T
Gene:: ZFAND5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000009.12:g.72356839A>T, NC_000009.11:g.74971755A>T

Select item 14907699976.

rs1490769997 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 9:72352865 (GRCh38)
9:74967781 (GRCh37)
Canonical SPDI:: NC_000009.12:72352864:A:C
Gene:: ZFAND5 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.72352865A>C, NC_000009.11:g.74967781A>C, NM_006007.4:c.*3088T>G, NM_006007.3:c.*3088T>G, NM_001102420.3:c.*3088T>G, NM_001102420.2:c.*3088T>G, NM_001102421.3:c.*3088T>G, NM_001102421.2:c.*3088T>G, NM_001278243.2:c.*3088T>G, NM_001278243.1:c.*3088T>G, NM_001278245.2:c.*3088T>G, NM_001278245.1:c.*3088T>G, XM_047423853.1:c.*3088T>G, NM_001278244.1:c.*3088T>G

Select item 14906590517.

rs1490659051 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 9:72365476 (GRCh38)
9:74980392 (GRCh37)
Canonical SPDI:: NC_000009.12:72365475:C:G,NC_000009.12:72365475:C:T
Gene:: ZFAND5 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.72365476C>G, NC_000009.12:g.72365476C>T, NC_000009.11:g.74980392C>G, NC_000009.11:g.74980392C>T

Select item 14906312708.

rs1490631270 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 9:72353216 (GRCh38)
9:74968132 (GRCh37)
Canonical SPDI:: NC_000009.12:72353215:T:A,NC_000009.12:72353215:T:C
Gene:: ZFAND5 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.72353216T>A, NC_000009.12:g.72353216T>C, NC_000009.11:g.74968132T>A, NC_000009.11:g.74968132T>C, NM_006007.4:c.*2737A>T, NM_006007.4:c.*2737A>G, NM_006007.3:c.*2737A>T, NM_006007.3:c.*2737A>G, NM_001102420.3:c.*2737A>T, NM_001102420.3:c.*2737A>G, NM_001102420.2:c.*2737A>T, NM_001102420.2:c.*2737A>G, NM_001102421.3:c.*2737A>T, NM_001102421.3:c.*2737A>G, NM_001102421.2:c.*2737A>T, NM_001102421.2:c.*2737A>G, NM_001278243.2:c.*2737A>T, NM_001278243.2:c.*2737A>G, NM_001278243.1:c.*2737A>T, NM_001278243.1:c.*2737A>G, NM_001278245.2:c.*2737A>T, NM_001278245.2:c.*2737A>G, NM_001278245.1:c.*2737A>T, NM_001278245.1:c.*2737A>G, XM_047423853.1:c.*2737A>T, XM_047423853.1:c.*2737A>G, NM_001278244.1:c.*2737A>T, NM_001278244.1:c.*2737A>G

Select item 14905530269.

rs1490553026 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 9:72366391 (GRCh38)
9:74981307 (GRCh37)
Canonical SPDI:: NC_000009.12:72366390:G:C
Gene:: ZFAND5 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000008/1 (GnomAD)
HGVS:: NC_000009.12:g.72366391G>C, NC_000009.11:g.74981307G>C

Select item 149048368110.

rs1490483681 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 9:72365071 (GRCh38)
9:74979987 (GRCh37)
Canonical SPDI:: NC_000009.12:72365070:C:A
Gene:: ZFAND5 (Varview)
Functional Consequence:: 5_prime_UTR_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.72365071C>A, NC_000009.11:g.74979987C>A, NM_006007.4:c.-382G>T, NM_006007.3:c.-382G>T, NM_001102420.3:c.-522G>T, NM_001102420.2:c.-522G>T, NM_001102421.3:c.-385G>T, NM_001102421.2:c.-385G>T

Select item 149045711911.

rs1490457119 [Homo sapiens]

Variant type:: DEL
Alleles:: CAT>- [Show Flanks]
Chromosome:: 9:72362298 (GRCh38)
9:74977214 (GRCh37)
Canonical SPDI:: NC_000009.12:72362297:CAT:
Gene:: ZFAND5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.72362298_72362300del, NC_000009.11:g.74977214_74977216del

Select item 149043883512.

rs1490438835 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:72360448 (GRCh38)
9:74975364 (GRCh37)
Canonical SPDI:: NC_000009.12:72360447:T:C
Gene:: ZFAND5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.72360448T>C, NC_000009.11:g.74975364T>C

Select item 149043152613.

rs1490431526 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 9:72360055 (GRCh38)
9:74974971 (GRCh37)
Canonical SPDI:: NC_000009.12:72360054:A:C
Gene:: ZFAND5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000396/6 (ALFA)
C=0.000057/8 (GnomAD)
C=0.001339/6 (Estonian)
HGVS:: NC_000009.12:g.72360055A>C, NC_000009.11:g.74974971A>C

Select item 149027569214.

rs1490275692 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:72360951 (GRCh38)
9:74975867 (GRCh37)
Canonical SPDI:: NC_000009.12:72360950:T:A
Gene:: ZFAND5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.72360951T>A, NC_000009.11:g.74975867T>A

Select item 149004710015.

rs1490047100 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:72360021 (GRCh38)
9:74974937 (GRCh37)
Canonical SPDI:: NC_000009.12:72360020:G:A
Gene:: ZFAND5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000009.12:g.72360021G>A, NC_000009.11:g.74974937G>A

Select item 148984285016.

rs1489842850 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:72354961 (GRCh38)
9:74969877 (GRCh37)
Canonical SPDI:: NC_000009.12:72354960:T:A
Gene:: ZFAND5 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.72354961T>A, NC_000009.11:g.74969877T>A, NM_006007.4:c.*992A>T, NM_006007.3:c.*992A>T, NM_001102420.3:c.*992A>T, NM_001102420.2:c.*992A>T, NM_001102421.3:c.*992A>T, NM_001102421.2:c.*992A>T, NM_001278243.2:c.*992A>T, NM_001278243.1:c.*992A>T, NM_001278245.2:c.*992A>T, NM_001278245.1:c.*992A>T, XM_047423853.1:c.*992A>T, NM_001278244.1:c.*992A>T

Select item 148967660617.

rs1489676606 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:72366672 (GRCh38)
9:74981588 (GRCh37)
Canonical SPDI:: NC_000009.12:72366671:A:G
Gene:: ZFAND5 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.72366672A>G, NC_000009.11:g.74981588A>G

Select item 148952202418.

rs1489522024 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACTA>- [Show Flanks]
Chromosome:: 9:72354547 (GRCh38)
9:74969463 (GRCh37)
Canonical SPDI:: NC_000009.12:72354545:AACTA:A
Gene:: ZFAND5 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000312/2 (1000Genomes)
HGVS:: NC_000009.12:g.72354547_72354550del, NC_000009.11:g.74969463_74969466del, NM_006007.4:c.*1404_*1407del, NM_006007.3:c.*1404_*1407del, NM_001102420.3:c.*1404_*1407del, NM_001102420.2:c.*1404_*1407del, NM_001102421.3:c.*1404_*1407del, NM_001102421.2:c.*1404_*1407del, NM_001278243.2:c.*1404_*1407del, NM_001278243.1:c.*1404_*1407del, NM_001278245.2:c.*1404_*1407del, NM_001278245.1:c.*1404_*1407del, XM_047423853.1:c.*1404_*1407del, NM_001278244.1:c.*1404_*1407del

Select item 148946857919.

rs1489468579 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:72358539 (GRCh38)
9:74973455 (GRCh37)
Canonical SPDI:: NC_000009.12:72358538:C:T
Gene:: ZFAND5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.72358539C>T, NC_000009.11:g.74973455C>T

Select item 148910528120.

rs1489105281 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 9:72354633 (GRCh38)
9:74969549 (GRCh37)
Canonical SPDI:: NC_000009.12:72354632:A:C,NC_000009.12:72354632:A:G
Gene:: ZFAND5 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.72354633A>C, NC_000009.12:g.72354633A>G, NC_000009.11:g.74969549A>C, NC_000009.11:g.74969549A>G, NM_006007.4:c.*1320T>G, NM_006007.4:c.*1320T>C, NM_006007.3:c.*1320T>G, NM_006007.3:c.*1320T>C, NM_001102420.3:c.*1320T>G, NM_001102420.3:c.*1320T>C, NM_001102420.2:c.*1320T>G, NM_001102420.2:c.*1320T>C, NM_001102421.3:c.*1320T>G, NM_001102421.3:c.*1320T>C, NM_001102421.2:c.*1320T>G, NM_001102421.2:c.*1320T>C, NM_001278243.2:c.*1320T>G, NM_001278243.2:c.*1320T>C, NM_001278243.1:c.*1320T>G, NM_001278243.1:c.*1320T>C, NM_001278245.2:c.*1320T>G, NM_001278245.2:c.*1320T>C, NM_001278245.1:c.*1320T>G, NM_001278245.1:c.*1320T>C, XM_047423853.1:c.*1320T>G, XM_047423853.1:c.*1320T>C, NM_001278244.1:c.*1320T>G, NM_001278244.1:c.*1320T>C

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