SNP Links for Gene (Select 79590) - SNP

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:156741188 (GRCh38)
1:156710980 (GRCh37)
Canonical SPDI:: NC_000001.11:156741187:A:C
Gene:: MRPL24 (Varview)
Functional Consequence:: upstream_transcript_variant,5_prime_UTR_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.156741188A>C, NC_000001.10:g.156710980A>C, XM_011509982.3:c.-69T>G, XM_011509982.2:c.-69T>G, XM_011509982.1:c.-69T>G

Select item 14890002316.

rs1489000231 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:156742223 (GRCh38)
1:156712015 (GRCh37)
Canonical SPDI:: NC_000001.11:156742222:G:A,NC_000001.11:156742222:G:C
Gene:: HDGF (Varview), MRPL24 (Varview)
Functional Consequence:: upstream_transcript_variant,5_prime_UTR_variant,3_prime_UTR_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.156742223G>A, NC_000001.11:g.156742223G>C, NC_000001.10:g.156712015G>A, NC_000001.10:g.156712015G>C, XM_011509454.3:c.*1226C>T, XM_011509454.3:c.*1226C>G, XM_011509454.2:c.*1226C>T, XM_011509454.2:c.*1226C>G, XM_011509454.1:c.*1226C>T, XM_011509454.1:c.*1226C>G, XM_011509982.3:c.-1104C>T, XM_011509982.3:c.-1104C>G, NM_004494.3:c.*1226C>T, NM_004494.3:c.*1226C>G, NM_004494.2:c.*1226C>T, NM_004494.2:c.*1226C>G, XM_011509453.3:c.*1226C>T, XM_011509453.3:c.*1226C>G, XM_011509453.2:c.*1226C>T, XM_011509453.2:c.*1226C>G, XM_011509453.1:c.*1226C>T, XM_011509453.1:c.*1226C>G, XM_011509455.3:c.*1226C>T, XM_011509455.3:c.*1226C>G, XM_011509455.2:c.*1226C>T, XM_011509455.2:c.*1226C>G, XM_011509455.1:c.*1226C>T, XM_011509455.1:c.*1226C>G, NR_135008.2:n.2152C>T, NR_135008.2:n.2152C>G, NR_135008.1:n.2152C>T, NR_135008.1:n.2152C>G, NM_001319186.2:c.*1226C>T, NM_001319186.2:c.*1226C>G, NM_001319186.1:c.*1226C>T, NM_001319186.1:c.*1226C>G, NM_001126050.2:c.*1226C>T, NM_001126050.2:c.*1226C>G, NM_001126050.1:c.*1226C>T, NM_001126050.1:c.*1226C>G, NM_001319188.2:c.*1226C>T, NM_001319188.2:c.*1226C>G, NM_001319188.1:c.*1226C>T, NM_001319188.1:c.*1226C>G, NM_001319187.2:c.*1226C>T, NM_001319187.2:c.*1226C>G, NM_001319187.1:c.*1226C>T, NM_001319187.1:c.*1226C>G, XM_047418831.1:c.*1226C>T, XM_047418831.1:c.*1226C>G, XM_047418832.1:c.*1226C>T, XM_047418832.1:c.*1226C>G, XM_047418833.1:c.*1226C>T, XM_047418833.1:c.*1226C>G, NM_001126051.1:c.*1226C>T, NM_001126051.1:c.*1226C>G

Select item 14888016407.

rs1488801640 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:156740736 (GRCh38)
1:156710528 (GRCh37)
Canonical SPDI:: NC_000001.11:156740735:C:T
Gene:: MRPL24 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.156740736C>T, NC_000001.10:g.156710528C>T

Select item 14887471368.

rs1488747136 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:156739749 (GRCh38)
1:156709541 (GRCh37)
Canonical SPDI:: NC_000001.11:156739748:C:T
Gene:: MRPL24 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.156739749C>T, NC_000001.10:g.156709541C>T

Select item 14882628019.

rs1488262801 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:156738659 (GRCh38)
1:156708451 (GRCh37)
Canonical SPDI:: NC_000001.11:156738658:G:A,NC_000001.11:156738658:G:T
Gene:: MRPL24 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000108/2 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000021/3 (GnomAD)
T=0.000446/2 (Estonian)
HGVS:: NC_000001.11:g.156738659G>A, NC_000001.11:g.156738659G>T, NC_000001.10:g.156708451G>A, NC_000001.10:g.156708451G>T, NM_024540.4:c.46C>T, NM_024540.4:c.46C>A, NM_024540.3:c.46C>T, NM_024540.3:c.46C>A, XM_011509982.3:c.46C>T, XM_011509982.3:c.46C>A, XM_011509982.2:c.46C>T, XM_011509982.2:c.46C>A, XM_011509982.1:c.46C>T, XM_011509982.1:c.46C>A, XM_011509981.3:c.46C>T, XM_011509981.3:c.46C>A, XM_011509981.2:c.46C>T, XM_011509981.2:c.46C>A, XM_011509981.1:c.46C>T, XM_011509981.1:c.46C>A, NM_145729.3:c.46C>T, NM_145729.3:c.46C>A, NM_145729.2:c.46C>T, NM_145729.2:c.46C>A, NP_078816.2:p.Pro16Ser, NP_078816.2:p.Pro16Thr, XP_011508284.1:p.Pro16Ser, XP_011508284.1:p.Pro16Thr, XP_011508283.1:p.Pro16Ser, XP_011508283.1:p.Pro16Thr, NP_663781.1:p.Pro16Ser, NP_663781.1:p.Pro16Thr

Select item 148824682610.

rs1488246826 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:156739291 (GRCh38)
1:156709083 (GRCh37)
Canonical SPDI:: NC_000001.11:156739290:C:A
Gene:: MRPL24 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000001.11:g.156739291C>A, NC_000001.10:g.156709083C>A

Select item 148811070611.

rs1488110706 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:156742774 (GRCh38)
1:156712566 (GRCh37)
Canonical SPDI:: NC_000001.11:156742773:T:C
Gene:: HDGF (Varview), MRPL24 (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000038/10 (TOPMED)
C=0.00005/7 (GnomAD)
HGVS:: NC_000001.11:g.156742774T>C, NC_000001.10:g.156712566T>C, XM_011509454.3:c.*675A>G, XM_011509454.2:c.*675A>G, XM_011509454.1:c.*675A>G, NM_004494.3:c.*675A>G, NM_004494.2:c.*675A>G, XM_011509453.3:c.*675A>G, XM_011509453.2:c.*675A>G, XM_011509453.1:c.*675A>G, XM_011509455.3:c.*675A>G, XM_011509455.2:c.*675A>G, XM_011509455.1:c.*675A>G, NR_135008.2:n.1601A>G, NR_135008.1:n.1601A>G, NM_001319186.2:c.*675A>G, NM_001319186.1:c.*675A>G, NM_001126050.2:c.*675A>G, NM_001126050.1:c.*675A>G, NM_001319188.2:c.*675A>G, NM_001319188.1:c.*675A>G, NM_001319187.2:c.*675A>G, NM_001319187.1:c.*675A>G, XM_047418831.1:c.*675A>G, XM_047418832.1:c.*675A>G, XM_047418833.1:c.*675A>G, NM_001126051.1:c.*675A>G

Select item 148799241112.

rs1487992411 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:156741485 (GRCh38)
1:156711277 (GRCh37)
Canonical SPDI:: NC_000001.11:156741484:G:A
Gene:: MRPL24 (Varview)
Functional Consequence:: upstream_transcript_variant,5_prime_UTR_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.156741485G>A, NC_000001.10:g.156711277G>A, XM_011509982.3:c.-366C>T

Select item 148790899313.

rs1487908993 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:156740214 (GRCh38)
1:156710006 (GRCh37)
Canonical SPDI:: NC_000001.11:156740213:T:C
Gene:: MRPL24 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.156740214T>C, NC_000001.10:g.156710006T>C

Select item 148655160514.

rs1486551605 [Homo sapiens]

Variant type:: DELINS
Alleles:: CA>- [Show Flanks]
Chromosome:: 1:156737022 (GRCh38)
1:156706814 (GRCh37)
Canonical SPDI:: NC_000001.11:156737020:ACA:A
Gene:: METTL25B (Varview), MRPL24 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000019/5 (TOPMED)
HGVS:: NC_000001.11:g.156737022_156737023del, NC_000001.10:g.156706814_156706815del

Select item 148625360515.

rs1486253605 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:156742653 (GRCh38)
1:156712445 (GRCh37)
Canonical SPDI:: NC_000001.11:156742652:G:A,NC_000001.11:156742652:G:T
Gene:: HDGF (Varview), MRPL24 (Varview)
Functional Consequence:: upstream_transcript_variant,5_prime_UTR_variant,3_prime_UTR_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.156742653G>A, NC_000001.11:g.156742653G>T, NC_000001.10:g.156712445G>A, NC_000001.10:g.156712445G>T, XM_011509454.3:c.*796C>T, XM_011509454.3:c.*796C>A, XM_011509454.2:c.*796C>T, XM_011509454.2:c.*796C>A, XM_011509454.1:c.*796C>T, XM_011509454.1:c.*796C>A, XM_011509982.3:c.-1534C>T, XM_011509982.3:c.-1534C>A, NM_004494.3:c.*796C>T, NM_004494.3:c.*796C>A, NM_004494.2:c.*796C>T, NM_004494.2:c.*796C>A, XM_011509453.3:c.*796C>T, XM_011509453.3:c.*796C>A, XM_011509453.2:c.*796C>T, XM_011509453.2:c.*796C>A, XM_011509453.1:c.*796C>T, XM_011509453.1:c.*796C>A, XM_011509455.3:c.*796C>T, XM_011509455.3:c.*796C>A, XM_011509455.2:c.*796C>T, XM_011509455.2:c.*796C>A, XM_011509455.1:c.*796C>T, XM_011509455.1:c.*796C>A, NR_135008.2:n.1722C>T, NR_135008.2:n.1722C>A, NR_135008.1:n.1722C>T, NR_135008.1:n.1722C>A, NM_001319186.2:c.*796C>T, NM_001319186.2:c.*796C>A, NM_001319186.1:c.*796C>T, NM_001319186.1:c.*796C>A, NM_001126050.2:c.*796C>T, NM_001126050.2:c.*796C>A, NM_001126050.1:c.*796C>T, NM_001126050.1:c.*796C>A, NM_001319188.2:c.*796C>T, NM_001319188.2:c.*796C>A, NM_001319188.1:c.*796C>T, NM_001319188.1:c.*796C>A, NM_001319187.2:c.*796C>T, NM_001319187.2:c.*796C>A, NM_001319187.1:c.*796C>T, NM_001319187.1:c.*796C>A, XM_047418831.1:c.*796C>T, XM_047418831.1:c.*796C>A, XM_047418832.1:c.*796C>T, XM_047418832.1:c.*796C>A, XM_047418833.1:c.*796C>T, XM_047418833.1:c.*796C>A, NM_001126051.1:c.*796C>T, NM_001126051.1:c.*796C>A

Select item 148610747816.

rs1486107478 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:156742519 (GRCh38)
1:156712311 (GRCh37)
Canonical SPDI:: NC_000001.11:156742518:T:C
Gene:: HDGF (Varview), MRPL24 (Varview)
Functional Consequence:: upstream_transcript_variant,5_prime_UTR_variant,3_prime_UTR_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.156742519T>C, NC_000001.10:g.156712311T>C, XM_011509454.3:c.*930A>G, XM_011509454.2:c.*930A>G, XM_011509454.1:c.*930A>G, XM_011509982.3:c.-1400A>G, NM_004494.3:c.*930A>G, NM_004494.2:c.*930A>G, XM_011509453.3:c.*930A>G, XM_011509453.2:c.*930A>G, XM_011509453.1:c.*930A>G, XM_011509455.3:c.*930A>G, XM_011509455.2:c.*930A>G, XM_011509455.1:c.*930A>G, NR_135008.2:n.1856A>G, NR_135008.1:n.1856A>G, NM_001319186.2:c.*930A>G, NM_001319186.1:c.*930A>G, NM_001126050.2:c.*930A>G, NM_001126050.1:c.*930A>G, NM_001319188.2:c.*930A>G, NM_001319188.1:c.*930A>G, NM_001319187.2:c.*930A>G, NM_001319187.1:c.*930A>G, XM_047418831.1:c.*930A>G, XM_047418832.1:c.*930A>G, XM_047418833.1:c.*930A>G, NM_001126051.1:c.*930A>G

Select item 148437876417.

rs1484378764 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:156738103 (GRCh38)
1:156707895 (GRCh37)
Canonical SPDI:: NC_000001.11:156738102:T:A
Gene:: MRPL24 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.156738103T>A, NC_000001.10:g.156707895T>A, NM_024540.4:c.311A>T, NM_024540.3:c.311A>T, XM_011509982.3:c.311A>T, XM_011509982.2:c.311A>T, XM_011509982.1:c.311A>T, XM_011509981.3:c.311A>T, XM_011509981.2:c.311A>T, XM_011509981.1:c.311A>T, NM_145729.3:c.311A>T, NM_145729.2:c.311A>T, NP_078816.2:p.Tyr104Phe, XP_011508284.1:p.Tyr104Phe, XP_011508283.1:p.Tyr104Phe, NP_663781.1:p.Tyr104Phe

Select item 148432811818.

rs1484328118 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:156739373 (GRCh38)
1:156709165 (GRCh37)
Canonical SPDI:: NC_000001.11:156739372:G:A
Gene:: MRPL24 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.156739373G>A, NC_000001.10:g.156709165G>A

Select item 148415083319.

rs1484150833 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:156740474 (GRCh38)
1:156710266 (GRCh37)
Canonical SPDI:: NC_000001.11:156740473:G:A
Gene:: MRPL24 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000214/3 (ALFA)
A=0.000049/13 (TOPMED)
A=0.00005/7 (GnomAD)
HGVS:: NC_000001.11:g.156740474G>A, NC_000001.10:g.156710266G>A

Select item 148165357920.

rs1481653579 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:156743247 (GRCh38)
1:156713039 (GRCh37)
Canonical SPDI:: NC_000001.11:156743246:G:A
Gene:: HDGF (Varview), MRPL24 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.156743247G>A, NC_000001.10:g.156713039G>A, XM_011509454.3:c.*202C>T, XM_011509454.2:c.*202C>T, XM_011509454.1:c.*202C>T, NM_004494.3:c.*202C>T, NM_004494.2:c.*202C>T, XM_011509453.3:c.*202C>T, XM_011509453.2:c.*202C>T, XM_011509453.1:c.*202C>T, XM_011509455.3:c.*202C>T, XM_011509455.2:c.*202C>T, XM_011509455.1:c.*202C>T, NR_135008.2:n.1128C>T, NR_135008.1:n.1128C>T, NM_001319186.2:c.*202C>T, NM_001319186.1:c.*202C>T, NM_001126050.2:c.*202C>T, NM_001126050.1:c.*202C>T, NM_001319188.2:c.*202C>T, NM_001319188.1:c.*202C>T, NM_001319187.2:c.*202C>T, NM_001319187.1:c.*202C>T, XM_047418831.1:c.*202C>T, XM_047418832.1:c.*202C>T, XM_047418833.1:c.*202C>T, NM_001126051.1:c.*202C>T

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