SNP Links for Gene (Select 79805) - SNP

Links from Gene

Items: 1 to 20 of 12801

<< First< Prev

Page of 641

Next >Last >>

Select item 14914204081.

rs1491420408 has merged into rs113055433 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTT>-,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT [Show Flanks]
Chromosome:: 1:212942520 (GRCh38)
1:213115862 (GRCh37)
Canonical SPDI:: NC_000001.11:212942510:TTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000001.11:212942510:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000001.11:212942510:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:212942510:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:212942510:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000001.11:212942510:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000001.11:212942510:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000001.11:212942510:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTT=0./0 (ALFA)
-=0.000011/3 (TOPMED)
-=0.053512/32 (NorthernSweden)
-=0.214257/1073 (1000Genomes)
HGVS:: NC_000001.11:g.212942520_212942528del, NC_000001.11:g.212942525_212942528del, NC_000001.11:g.212942526_212942528del, NC_000001.11:g.212942527_212942528del, NC_000001.11:g.212942528del, NC_000001.11:g.212942528dup, NC_000001.11:g.212942527_212942528dup, NC_000001.11:g.212942526_212942528dup, NC_000001.10:g.213115862_213115870del, NC_000001.10:g.213115867_213115870del, NC_000001.10:g.213115868_213115870del, NC_000001.10:g.213115869_213115870del, NC_000001.10:g.213115870del, NC_000001.10:g.213115870dup, NC_000001.10:g.213115869_213115870dup, NC_000001.10:g.213115868_213115870dup

Select item 14914108692.

rs1491410869 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 1:212989731 (GRCh38)
1:213163073 (GRCh37)
Canonical SPDI:: NC_000001.11:212989730:CT:
Gene:: VASH2 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.212989731_212989732del, NC_000001.10:g.213163073_213163074del, NM_024749.5:c.*1147_*1148del, NM_024749.4:c.*1147_*1148del, NM_024749.3:c.*1147_*1148del, NM_001136474.3:c.*1147_*1148del, NM_001136474.2:c.*1147_*1148del, NM_001136474.1:c.*1147_*1148del, NM_001136475.3:c.*1147_*1148del, NM_001136475.2:c.*1147_*1148del, NM_001136475.1:c.*1147_*1148del, NM_001301056.2:c.*1147_*1148del, NM_001301056.1:c.*1147_*1148del

Select item 14913436413.

rs1491343641 has merged into rs113122383 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTT>-,T,TT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT [Show Flanks]
Chromosome:: 1:212962987 (GRCh38)
1:213136329 (GRCh37)
Canonical SPDI:: NC_000001.11:212962977:TTTTTTTTTTTT:TTTTTTTTT,NC_000001.11:212962977:TTTTTTTTTTTT:TTTTTTTTTT,NC_000001.11:212962977:TTTTTTTTTTTT:TTTTTTTTTTT,NC_000001.11:212962977:TTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000001.11:212962977:TTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000001.11:212962977:TTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:212962977:TTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:212962977:TTTTTTTTTTTT:TTTTTTTTTTTTTTTTT
Gene:: VASH2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTT=0./0 (ALFA)
-=0.09509/428 (1000Genomes)
HGVS:: NC_000001.11:g.212962987_212962989del, NC_000001.11:g.212962988_212962989del, NC_000001.11:g.212962989del, NC_000001.11:g.212962989dup, NC_000001.11:g.212962988_212962989dup, NC_000001.11:g.212962987_212962989dup, NC_000001.11:g.212962986_212962989dup, NC_000001.11:g.212962985_212962989dup, NC_000001.10:g.213136329_213136331del, NC_000001.10:g.213136330_213136331del, NC_000001.10:g.213136331del, NC_000001.10:g.213136331dup, NC_000001.10:g.213136330_213136331dup, NC_000001.10:g.213136329_213136331dup, NC_000001.10:g.213136328_213136331dup, NC_000001.10:g.213136327_213136331dup

Select item 14912948554.

rs1491294855 has merged into rs140070220 [Homo sapiens]

Variant type:: DELINS
Alleles:: GTGTGTGT>-,GT,GTGT,GTGTGT,GTGTGTGTGT,GTGTGTGTGTGT,GTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGT [Show Flanks]
Chromosome:: 1:212959278 (GRCh38)
1:213132620 (GRCh37)
Canonical SPDI:: NC_000001.11:212959266:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGT,NC_000001.11:212959266:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGT,NC_000001.11:212959266:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT,NC_000001.11:212959266:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT,NC_000001.11:212959266:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT,NC_000001.11:212959266:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT,NC_000001.11:212959266:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT,NC_000001.11:212959266:TGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Gene:: VASH2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGTGTGTGTGTGT=0./0 (ALFA)
TG=0.3221/1613 (1000Genomes)
TG=0.4867/292 (NorthernSweden)
HGVS:: NC_000001.11:g.212959268GT[5], NC_000001.11:g.212959268GT[6], NC_000001.11:g.212959268GT[7], NC_000001.11:g.212959268GT[8], NC_000001.11:g.212959268GT[10], NC_000001.11:g.212959268GT[11], NC_000001.11:g.212959268GT[12], NC_000001.11:g.212959268GT[14], NC_000001.10:g.213132610GT[5], NC_000001.10:g.213132610GT[6], NC_000001.10:g.213132610GT[7], NC_000001.10:g.213132610GT[8], NC_000001.10:g.213132610GT[10], NC_000001.10:g.213132610GT[11], NC_000001.10:g.213132610GT[12], NC_000001.10:g.213132610GT[14]

Select item 14911044845.

rs1491104484 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 1:212942510 (GRCh38)
1:213115852 (GRCh37)
Canonical SPDI:: NC_000001.11:212942509:CT:
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.004131/49 (ALFA)
-=0.00406/26 (1000Genomes)
-=0.006198/816 (GnomAD)
HGVS:: NC_000001.11:g.212942510_212942511del, NC_000001.10:g.213115852_213115853del

Select item 14910790626.

rs1491079062 has merged into rs775872523 [Homo sapiens]

Variant type:: DELINS
Alleles:: TG>-,TGTG [Show Flanks]
Chromosome:: 1:212952370 (GRCh38)
1:213125712 (GRCh37)
Canonical SPDI:: NC_000001.11:212952355:TGTGTGTGTGTGTGTG:TGTGTGTGTGTGTG,NC_000001.11:212952355:TGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTG
Gene:: VASH2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGTGTGTGTGTGTGTGTG=0./0 (ALFA)
-=0.000045/12 (TOPMED)
TG=0.00006/1 (TOMMO)
HGVS:: NC_000001.11:g.212952356TG[7], NC_000001.11:g.212952356TG[9], NC_000001.10:g.213125698TG[7], NC_000001.10:g.213125698TG[9]

Select item 14910044437.

rs1491004443 has merged into rs111890314 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,A,AAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA [Show Flanks]
Chromosome:: 1:212970907 (GRCh38)
1:213144249 (GRCh37)
Canonical SPDI:: NC_000001.11:212970898:AAAAAAAAAA:AAAAAAAA,NC_000001.11:212970898:AAAAAAAAAA:AAAAAAAAA,NC_000001.11:212970898:AAAAAAAAAA:AAAAAAAAAAA,NC_000001.11:212970898:AAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:212970898:AAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:212970898:AAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:212970898:AAAAAAAAAA:AAAAAAAAAAAAAAAA
Gene:: VASH2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAA=0./0 (ALFA)
-=0.000008/2 (TOPMED)
AAAA=0.094432/173 (Korea1K)
HGVS:: NC_000001.11:g.212970907_212970908del, NC_000001.11:g.212970908del, NC_000001.11:g.212970908dup, NC_000001.11:g.212970906_212970908dup, NC_000001.11:g.212970905_212970908dup, NC_000001.11:g.212970904_212970908dup, NC_000001.11:g.212970903_212970908dup, NC_000001.10:g.213144249_213144250del, NC_000001.10:g.213144250del, NC_000001.10:g.213144250dup, NC_000001.10:g.213144248_213144250dup, NC_000001.10:g.213144247_213144250dup, NC_000001.10:g.213144246_213144250dup, NC_000001.10:g.213144245_213144250dup

Select item 14909831988.

rs1490983198 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 1:212973407 (GRCh38)
1:213146749 (GRCh37)
Canonical SPDI:: NC_000001.11:212973406:T:A,NC_000001.11:212973406:T:C
Gene:: VASH2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.212973407T>A, NC_000001.11:g.212973407T>C, NC_000001.10:g.213146749T>A, NC_000001.10:g.213146749T>C

Select item 14909815379.

rs1490981537 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:212984085 (GRCh38)
1:213157427 (GRCh37)
Canonical SPDI:: NC_000001.11:212984084:A:G
Gene:: VASH2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000035/1 (TOMMO)
HGVS:: NC_000001.11:g.212984085A>G, NC_000001.10:g.213157427A>G

Select item 149084614010.

rs1490846140 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:212950777 (GRCh38)
1:213124119 (GRCh37)
Canonical SPDI:: NC_000001.11:212950776:G:A,NC_000001.11:212950776:G:C
Gene:: VASH2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000029/4 (GnomAD)
A=0.000045/12 (TOPMED)
A=0.000156/1 (1000Genomes)
A=0.000319/5 (TOMMO)
A=0.000343/1 (KOREAN)
G=0.5/1 (SGDP_PRJ)
HGVS:: NC_000001.11:g.212950777G>A, NC_000001.11:g.212950777G>C, NC_000001.10:g.213124119G>A, NC_000001.10:g.213124119G>C

Select item 149079389111.

rs1490793891 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:212935953 (GRCh38)
1:213109295 (GRCh37)
Canonical SPDI:: NC_000001.11:212935952:G:A
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.212935953G>A, NC_000001.10:g.213109295G>A

Select item 149078676812.

rs1490786768 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:212984720 (GRCh38)
1:213158062 (GRCh37)
Canonical SPDI:: NC_000001.11:212984719:C:A,NC_000001.11:212984719:C:T
Gene:: VASH2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.212984720C>A, NC_000001.11:g.212984720C>T, NC_000001.10:g.213158062C>A, NC_000001.10:g.213158062C>T

Select item 149071947613.

rs1490719476 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:212952050 (GRCh38)
1:213125392 (GRCh37)
Canonical SPDI:: NC_000001.11:212952049:A:T
Gene:: VASH2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.212952050A>T, NC_000001.10:g.213125392A>T

Select item 149066463014.

rs1490664630 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:212976783 (GRCh38)
1:213150125 (GRCh37)
Canonical SPDI:: NC_000001.11:212976782:C:T
Gene:: VASH2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.212976783C>T, NC_000001.10:g.213150125C>T

Select item 149062971215.

rs1490629712 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:212936489 (GRCh38)
1:213109831 (GRCh37)
Canonical SPDI:: NC_000001.11:212936488:T:C
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.212936489T>C, NC_000001.10:g.213109831T>C

Select item 149061497916.

rs1490614979 [Homo sapiens]

Variant type:: DELINS
Alleles:: TCT>- [Show Flanks]
Chromosome:: 1:212965217 (GRCh38)
1:213138559 (GRCh37)
Canonical SPDI:: NC_000001.11:212965214:CTTCT:CT
Gene:: VASH2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CT=0.000071/1 (ALFA)
-=0.000021/3 (GnomAD)
-=0.00003/8 (TOPMED)
HGVS:: NC_000001.11:g.212965217_212965219del, NC_000001.10:g.213138559_213138561del

Select item 149057806317.

rs1490578063 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:212937461 (GRCh38)
1:213110803 (GRCh37)
Canonical SPDI:: NC_000001.11:212937460:T:C
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.212937461T>C, NC_000001.10:g.213110803T>C

Select item 149056436918.

rs1490564369 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:212938723 (GRCh38)
1:213112065 (GRCh37)
Canonical SPDI:: NC_000001.11:212938722:T:G
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.212938723T>G, NC_000001.10:g.213112065T>G

Select item 149052935719.

rs1490529357 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:212953274 (GRCh38)
1:213126616 (GRCh37)
Canonical SPDI:: NC_000001.11:212953273:G:A
Gene:: VASH2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.212953274G>A, NC_000001.10:g.213126616G>A

Select item 149049216920.

rs1490492169 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:212983172 (GRCh38)
1:213156514 (GRCh37)
Canonical SPDI:: NC_000001.11:212983171:T:C
Gene:: VASH2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.212983172T>C, NC_000001.10:g.213156514T>C

<< First< Prev

Page of 641

Next >Last >>

dbSNP

Result Filters

Validation Status

Publication

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 12801

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity