Links from Gene
Items: 1 to 20 of 1000
1.
rs1491549654 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GC>-
[Show Flanks]
- Chromosome:
- 9:83779465
(GRCh38)
9:86394380
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83779463:CGC:C
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
-=0.00046/7
(TOMMO)
- HGVS:
2.
rs1491548689 has merged into rs368970118 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AC>-,ACAC,ACACAC,ACACACAC,ACACACACAC,ACACACACACAC,ACACACACACACAC,ACACACACACACACAC,ACACACACACACACACAC,ACACACACACACACACACAC,ACACACACACACACACACACAC,ACACACACACACACACACACACAC
[Show Flanks]
- Chromosome:
- 9:83779463
(GRCh38)
9:86394378
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83779448:ACACACACACACACAC:ACACACACACACAC,NC_000009.12:83779448:ACACACACACACACAC:ACACACACACACACACAC,NC_000009.12:83779448:ACACACACACACACAC:ACACACACACACACACACAC,NC_000009.12:83779448:ACACACACACACACAC:ACACACACACACACACACACAC,NC_000009.12:83779448:ACACACACACACACAC:ACACACACACACACACACACACAC,NC_000009.12:83779448:ACACACACACACACAC:ACACACACACACACACACACACACAC,NC_000009.12:83779448:ACACACACACACACAC:ACACACACACACACACACACACACACAC,NC_000009.12:83779448:ACACACACACACACAC:ACACACACACACACACACACACACACACAC,NC_000009.12:83779448:ACACACACACACACAC:ACACACACACACACACACACACACACACACAC,NC_000009.12:83779448:ACACACACACACACAC:ACACACACACACACACACACACACACACACACAC,NC_000009.12:83779448:ACACACACACACACAC:ACACACACACACACACACACACACACACACACACAC,NC_000009.12:83779448:ACACACACACACACAC:ACACACACACACACACACACACACACACACACACACAC
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ACACACACACACACACAC=0./0
(
ALFA)
- HGVS:
NC_000009.12:g.83779449AC[7], NC_000009.12:g.83779449AC[9], NC_000009.12:g.83779449AC[10], NC_000009.12:g.83779449AC[11], NC_000009.12:g.83779449AC[12], NC_000009.12:g.83779449AC[13], NC_000009.12:g.83779449AC[14], NC_000009.12:g.83779449AC[15], NC_000009.12:g.83779449AC[16], NC_000009.12:g.83779449AC[17], NC_000009.12:g.83779449AC[18], NC_000009.12:g.83779449AC[19], NC_000009.11:g.86394364AC[7], NC_000009.11:g.86394364AC[9], NC_000009.11:g.86394364AC[10], NC_000009.11:g.86394364AC[11], NC_000009.11:g.86394364AC[12], NC_000009.11:g.86394364AC[13], NC_000009.11:g.86394364AC[14], NC_000009.11:g.86394364AC[15], NC_000009.11:g.86394364AC[16], NC_000009.11:g.86394364AC[17], NC_000009.11:g.86394364AC[18], NC_000009.11:g.86394364AC[19]
4.
rs1491463271 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->ACATATATATACAC
[Show Flanks]
- Chromosome:
- 9:83779536
(GRCh38)
9:86394452
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83779536:ATATATATACAC:ATATATATACACACATATATATACAC
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ATATATATACACACATATATATACAC=0.002951/35
(
ALFA)
ATATATATACACAC=0.002236/244
(GnomAD)
- HGVS:
5.
rs1491444782 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CT>-
[Show Flanks]
- Chromosome:
- 9:83774702
(GRCh38)
9:86389617
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83774701:CT:
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.0016/19
(
ALFA)
-=0.00328/309
(GnomAD)
-=0.0364/510
(TOMMO)
- HGVS:
6.
rs1491433159 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->T
[Show Flanks]
- Chromosome:
- 9:83739418
(GRCh38)
9:86354334
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83739418:T:TT
- Gene:
- GKAP1 (Varview), LOC124902191 (Varview)
- Functional Consequence:
- 500B_downstream_variant,downstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
TT=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
7.
rs1491432768 has merged into rs1426436116 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TT>-,T,TTT,TTTT
[Show Flanks]
- Chromosome:
- 9:83812367
(GRCh38)
9:86427282
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83812359:TTTTTTTTT:TTTTTTT,NC_000009.12:83812359:TTTTTTTTT:TTTTTTTT,NC_000009.12:83812359:TTTTTTTTT:TTTTTTTTTT,NC_000009.12:83812359:TTTTTTTTT:TTTTTTTTTTT
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTT=0./0
(
ALFA)
-=0.04312/79
(Korea1K)
-=0.04439/744
(TOMMO)
-=0.045/27
(NorthernSweden)
- HGVS:
8.
rs1491409996 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->CTT
[Show Flanks]
- Chromosome:
- 9:83795589
(GRCh38)
9:86410505
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83795589:TT:TTCTT
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
TTCTT=0./0
(
ALFA)
TTC=0.000004/1
(TOPMED)
- HGVS:
9.
rs1491383132 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TA>-
[Show Flanks]
- Chromosome:
- 9:83805472
(GRCh38)
9:86420387
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83805470:ATA:A
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000084/1
(
ALFA)
-=0.000404/48
(GnomAD)
-=0.006024/11
(Korea1K)
- HGVS:
10.
rs1491382506 has merged into rs1168792305 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTTTTT>-,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 9:83774713
(GRCh38)
9:86389628
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83774702:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000009.12:g.83774713_83774728del, NC_000009.12:g.83774717_83774728del, NC_000009.12:g.83774718_83774728del, NC_000009.12:g.83774719_83774728del, NC_000009.12:g.83774720_83774728del, NC_000009.12:g.83774721_83774728del, NC_000009.12:g.83774722_83774728del, NC_000009.12:g.83774723_83774728del, NC_000009.12:g.83774725_83774728del, NC_000009.12:g.83774726_83774728del, NC_000009.12:g.83774727_83774728del, NC_000009.12:g.83774728del, NC_000009.12:g.83774728dup, NC_000009.12:g.83774727_83774728dup, NC_000009.12:g.83774726_83774728dup, NC_000009.12:g.83774725_83774728dup, NC_000009.12:g.83774724_83774728dup, NC_000009.12:g.83774723_83774728dup, NC_000009.11:g.86389628_86389643del, NC_000009.11:g.86389632_86389643del, NC_000009.11:g.86389633_86389643del, NC_000009.11:g.86389634_86389643del, NC_000009.11:g.86389635_86389643del, NC_000009.11:g.86389636_86389643del, NC_000009.11:g.86389637_86389643del, NC_000009.11:g.86389638_86389643del, NC_000009.11:g.86389640_86389643del, NC_000009.11:g.86389641_86389643del, NC_000009.11:g.86389642_86389643del, NC_000009.11:g.86389643del, NC_000009.11:g.86389643dup, NC_000009.11:g.86389642_86389643dup, NC_000009.11:g.86389641_86389643dup, NC_000009.11:g.86389640_86389643dup, NC_000009.11:g.86389639_86389643dup, NC_000009.11:g.86389638_86389643dup
11.
rs1491345680 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->A,T
[Show Flanks]
- Chromosome:
- 9:83804846
(GRCh38)
9:86419762
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83804846::A,NC_000009.12:83804846::T
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
A=0.00005/2
(GnomAD)
- HGVS:
12.
rs1491322198 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->ACACACACACACACATTCTAAAGTGAAATCGA,ACACACACACACGCACAT,ACACACACACACGCACATATACAT,ACACACACACAT
[Show Flanks]
- Chromosome:
- 9:83779464
(GRCh38)
9:86394380
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83779464::ACACACACACACACATTCTAAAGTGAAATCGA,NC_000009.12:83779464::ACACACACACACGCACAT,NC_000009.12:83779464::ACACACACACACGCACATATACAT,NC_000009.12:83779464::ACACACACACAT
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ACACACACACACGCACATATACAT=0./0
(
ALFA)
ACACACACACACACATTCTAAAGTGAAATCGA=0.00001/1
(GnomAD)
- HGVS:
13.
rs1491261686 has merged into rs749159512 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TCTC>-,TC,TCTCTC
[Show Flanks]
- Chromosome:
- 9:83741358
(GRCh38)
9:86356273
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83741355:TCTCTC:TC,NC_000009.12:83741355:TCTCTC:TCTC,NC_000009.12:83741355:TCTCTC:TCTCTCTC
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TC=0./0
(
ALFA)
-=0.00165/7
(Estonian)
-=0.00186/3
(Korea1K)
-=0.00344/2
(NorthernSweden)
-=0.20498/790
(ALSPAC)
- HGVS:
14.
rs1491234383 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->ATTT,T
[Show Flanks]
- Chromosome:
- 9:83771237
(GRCh38)
9:86386153
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83771237:TT:TTATTT,NC_000009.12:83771237:TT:TTT
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
TTT=0./0
(
ALFA)
T=0.000029/4
(GnomAD)
- HGVS:
15.
rs1491228643 has merged into rs58291258 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTT>-,TT,TTT,TTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 9:83795599
(GRCh38)
9:86410514
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:83795588:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTT=0./0
(
ALFA)
- HGVS:
NC_000009.12:g.83795599_83795609del, NC_000009.12:g.83795601_83795609del, NC_000009.12:g.83795602_83795609del, NC_000009.12:g.83795604_83795609del, NC_000009.12:g.83795606_83795609del, NC_000009.12:g.83795607_83795609del, NC_000009.12:g.83795608_83795609del, NC_000009.12:g.83795609del, NC_000009.12:g.83795609dup, NC_000009.12:g.83795608_83795609dup, NC_000009.12:g.83795607_83795609dup, NC_000009.12:g.83795606_83795609dup, NC_000009.12:g.83795605_83795609dup, NC_000009.12:g.83795604_83795609dup, NC_000009.12:g.83795603_83795609dup, NC_000009.12:g.83795602_83795609dup, NC_000009.12:g.83795601_83795609dup, NC_000009.12:g.83795600_83795609dup, NC_000009.12:g.83795599_83795609dup, NC_000009.12:g.83795609_83795610insTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000009.12:g.83795609_83795610insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000009.12:g.83795609_83795610insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000009.11:g.86410514_86410524del, NC_000009.11:g.86410516_86410524del, NC_000009.11:g.86410517_86410524del, NC_000009.11:g.86410519_86410524del, NC_000009.11:g.86410521_86410524del, NC_000009.11:g.86410522_86410524del, NC_000009.11:g.86410523_86410524del, NC_000009.11:g.86410524del, NC_000009.11:g.86410524dup, NC_000009.11:g.86410523_86410524dup, NC_000009.11:g.86410522_86410524dup, NC_000009.11:g.86410521_86410524dup, NC_000009.11:g.86410520_86410524dup, NC_000009.11:g.86410519_86410524dup, NC_000009.11:g.86410518_86410524dup, NC_000009.11:g.86410517_86410524dup, NC_000009.11:g.86410516_86410524dup, NC_000009.11:g.86410515_86410524dup, NC_000009.11:g.86410514_86410524dup, NC_000009.11:g.86410524_86410525insTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000009.11:g.86410524_86410525insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000009.11:g.86410524_86410525insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
17.
rs1491224540 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->ACAC
[Show Flanks]
- Chromosome:
- 9:83741356
(GRCh38)
9:86356272
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83741356:C:CACAC
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
CACAC=0./0
(
ALFA)
CACA=0.00031/25
(GnomAD)
- HGVS:
19.
rs1491213208 has merged into rs1277312684 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TATA>-,TA,TATATA
[Show Flanks]
- Chromosome:
- 9:83779542
(GRCh38)
9:86394457
(GRCh37)
- Canonical SPDI:
- NC_000009.12:83779535:TATATATATA:TATATA,NC_000009.12:83779535:TATATATATA:TATATATA,NC_000009.12:83779535:TATATATATA:TATATATATATA
- Gene:
- GKAP1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TATATATA=0./0
(
ALFA)
TA=0.000665/70
(GnomAD)
- HGVS: