Links from Gene
Items: 1 to 20 of 8723
1.
rs1491306008 has merged into rs11425379 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTT>-,T,TT,TTTT,TTTTT,TTTTTT,TTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 3:136837855
(GRCh38)
3:136556697
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136837843:TTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000003.12:136837843:TTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000003.12:136837843:TTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000003.12:136837843:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000003.12:136837843:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000003.12:136837843:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000003.12:136837843:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- SLC35G2 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTT=0./0
(
ALFA)
-=0.4085/2046
(1000Genomes)
T=0.475/19
(GENOME_DK)
- HGVS:
NC_000003.12:g.136837855_136837857del, NC_000003.12:g.136837856_136837857del, NC_000003.12:g.136837857del, NC_000003.12:g.136837857dup, NC_000003.12:g.136837856_136837857dup, NC_000003.12:g.136837855_136837857dup, NC_000003.12:g.136837848_136837857dup, NC_000003.11:g.136556697_136556699del, NC_000003.11:g.136556698_136556699del, NC_000003.11:g.136556699del, NC_000003.11:g.136556699dup, NC_000003.11:g.136556698_136556699dup, NC_000003.11:g.136556697_136556699dup, NC_000003.11:g.136556690_136556699dup
2.
rs1491304080 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AA>-
[Show Flanks]
- Chromosome:
- 3:136841734
(GRCh38)
3:136560576
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136841731:AAAA:AA
- Gene:
- SLC35G2 (Varview), NCK1-DT (Varview)
- Functional Consequence:
- 500B_downstream_variant,intron_variant,downstream_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency
- MAF:
-=0.00007/6
(GnomAD)
- HGVS:
3.
rs1491234274 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AA>-
[Show Flanks]
- Chromosome:
- 3:136837143
(GRCh38)
3:136555985
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136837142:AA:
- Gene:
- SLC35G2 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.000007/1
(GnomAD)
- HGVS:
4.
rs1491231325 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TT>-
[Show Flanks]
- Chromosome:
- 3:136820994
(GRCh38)
3:136539836
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136820993:TT:
- Gene:
- SLC35G2 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.000014/1
(GnomAD)
- HGVS:
7.
rs1491099944 has merged into rs10691819 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AATAAATAAATAAATAAATAAATAAATA>-,AATAAATA,AATAAATAAATA,AATAAATAAATAAATA,AATAAATAAATAAATAAATA,AATAAATAAATAAATAAATAAATA,AATAAATAAATAAATAAATAAATAAATAAATA,AATAAATAAATAAATAAATAAATAAATAAATAAATA,AATAAATAAATAAATAAATAAATAAATAAATAAATAAATA,AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA,AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA
[Show Flanks]
- Chromosome:
- 3:136841750
(GRCh38)
3:136560592
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136841732:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA:AAATAAATAAATAAATA,NC_000003.12:136841732:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA:AAATAAATAAATAAATAAATAAATA,NC_000003.12:136841732:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA:AAATAAATAAATAAATAAATAAATAAATA,NC_000003.12:136841732:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA:AAATAAATAAATAAATAAATAAATAAATAAATA,NC_000003.12:136841732:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA:AAATAAATAAATAAATAAATAAATAAATAAATAAATA,NC_000003.12:136841732:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA,NC_000003.12:136841732:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA,NC_000003.12:136841732:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA,NC_000003.12:136841732:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA,NC_000003.12:136841732:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA,NC_000003.12:136841732:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA:AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA
- Gene:
- SLC35G2 (Varview), NCK1-DT (Varview)
- Functional Consequence:
- intron_variant,500B_downstream_variant,downstream_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAATAAATAAATAAATAAATAAATA=0./0
(
ALFA)
AAATAAAT=0.1777/890
(1000Genomes)
- HGVS:
NC_000003.12:g.136841734AATA[4], NC_000003.12:g.136841734AATA[6], NC_000003.12:g.136841734AATA[7], NC_000003.12:g.136841734AATA[8], NC_000003.12:g.136841734AATA[9], NC_000003.12:g.136841734AATA[10], NC_000003.12:g.136841734AATA[12], NC_000003.12:g.136841734AATA[13], NC_000003.12:g.136841734AATA[14], NC_000003.12:g.136841734AATA[15], NC_000003.12:g.136841734AATA[16], NC_000003.11:g.136560576AATA[4], NC_000003.11:g.136560576AATA[6], NC_000003.11:g.136560576AATA[7], NC_000003.11:g.136560576AATA[8], NC_000003.11:g.136560576AATA[9], NC_000003.11:g.136560576AATA[10], NC_000003.11:g.136560576AATA[12], NC_000003.11:g.136560576AATA[13], NC_000003.11:g.136560576AATA[14], NC_000003.11:g.136560576AATA[15], NC_000003.11:g.136560576AATA[16]
8.
rs1491041984 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TA>-
[Show Flanks]
- Chromosome:
- 3:136847312
(GRCh38)
3:136566154
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136847311:TA:
- Gene:
- SLC35G2 (Varview), NCK1-DT (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.000071/1
(
ALFA)
-=0.000023/6
(TOPMED)
-=0.000029/4
(GnomAD)
- HGVS:
9.
rs1491013631 has merged into rs36115986 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 3:136843336
(GRCh38)
3:136562178
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:136843322:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- SLC35G2 (Varview), NCK1-DT (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAA=0./0
(
ALFA)
- HGVS:
NC_000003.12:g.136843336_136843351del, NC_000003.12:g.136843337_136843351del, NC_000003.12:g.136843338_136843351del, NC_000003.12:g.136843339_136843351del, NC_000003.12:g.136843340_136843351del, NC_000003.12:g.136843341_136843351del, NC_000003.12:g.136843342_136843351del, NC_000003.12:g.136843343_136843351del, NC_000003.12:g.136843344_136843351del, NC_000003.12:g.136843345_136843351del, NC_000003.12:g.136843346_136843351del, NC_000003.12:g.136843347_136843351del, NC_000003.12:g.136843348_136843351del, NC_000003.12:g.136843349_136843351del, NC_000003.12:g.136843350_136843351del, NC_000003.12:g.136843351del, NC_000003.12:g.136843351dup, NC_000003.12:g.136843350_136843351dup, NC_000003.12:g.136843349_136843351dup, NC_000003.12:g.136843348_136843351dup, NC_000003.12:g.136843347_136843351dup, NC_000003.12:g.136843346_136843351dup, NC_000003.12:g.136843344_136843351dup, NC_000003.12:g.136843343_136843351dup, NC_000003.12:g.136843342_136843351dup, NC_000003.11:g.136562178_136562193del, NC_000003.11:g.136562179_136562193del, NC_000003.11:g.136562180_136562193del, NC_000003.11:g.136562181_136562193del, NC_000003.11:g.136562182_136562193del, NC_000003.11:g.136562183_136562193del, NC_000003.11:g.136562184_136562193del, NC_000003.11:g.136562185_136562193del, NC_000003.11:g.136562186_136562193del, NC_000003.11:g.136562187_136562193del, NC_000003.11:g.136562188_136562193del, NC_000003.11:g.136562189_136562193del, NC_000003.11:g.136562190_136562193del, NC_000003.11:g.136562191_136562193del, NC_000003.11:g.136562192_136562193del, NC_000003.11:g.136562193del, NC_000003.11:g.136562193dup, NC_000003.11:g.136562192_136562193dup, NC_000003.11:g.136562191_136562193dup, NC_000003.11:g.136562190_136562193dup, NC_000003.11:g.136562189_136562193dup, NC_000003.11:g.136562188_136562193dup, NC_000003.11:g.136562186_136562193dup, NC_000003.11:g.136562185_136562193dup, NC_000003.11:g.136562184_136562193dup
12.
rs1490778632 has merged into rs1036038255 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- A>-,AA
[Show Flanks]
- Chromosome:
- 3:136821447
(GRCh38)
3:136540289
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136821446:AAAAAAAAAA:AAAAAAAAA,NC_000003.12:136821446:AAAAAAAAAA:AAAAAAAAAAA
- Gene:
- SLC35G2 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAA=0./0
(
ALFA)
-=0.000019/5
(TOPMED)
-=0.000035/1
(TOMMO)
- HGVS:
13.
rs1490656215 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- GCTGTA>-
[Show Flanks]
- Chromosome:
- 3:136821800
(GRCh38)
3:136540642
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136821799:GCTGTA:
- Gene:
- SLC35G2 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.000007/1
(GnomAD)
- HGVS:
15.
rs1490598286 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 3:136837725
(GRCh38)
3:136556567
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136837724:C:T
- Gene:
- SLC35G2 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000014/2
(GnomAD)
T=0.00003/8
(TOPMED)
- HGVS:
16.
rs1490504057 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 3:136850465
(GRCh38)
3:136569307
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136850464:C:A
- Gene:
- SLC35G2 (Varview), NCK1-DT (Varview)
- Functional Consequence:
- intron_variant,5_prime_UTR_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000015/4
(TOPMED)
A=0.000021/3
(GnomAD)
- HGVS:
17.
rs1490422280 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>A
[Show Flanks]
- Chromosome:
- 3:136820853
(GRCh38)
3:136539695
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136820852:T:A
- Gene:
- SLC35G2 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000014/2
(GnomAD)
- HGVS:
18.
rs1490339228 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->T
[Show Flanks]
- Chromosome:
- 3:136845894
(GRCh38)
3:136564737
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136845894:T:TT
- Gene:
- SLC35G2 (Varview), NCK1-DT (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TT=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000011/3
(TOPMED)
- HGVS:
19.
rs1490042721 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 3:136844962
(GRCh38)
3:136563804
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136844961:G:A
- Gene:
- SLC35G2 (Varview), NCK1-DT (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
A=0.000015/4
(TOPMED)
- HGVS:
20.
rs1489988533 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C,T
[Show Flanks]
- Chromosome:
- 3:136820522
(GRCh38)
3:136539364
(GRCh37)
- Canonical SPDI:
- NC_000003.12:136820521:A:C,NC_000003.12:136820521:A:T
- Gene:
- SLC35G2 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by cluster
- MAF:
C=0.000007/1
(GnomAD)
- HGVS: