SNP Links for Gene (Select 83550) - SNP

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Select item 14908509791.

rs1490850979 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: X:137033296 (GRCh38)
X:136115455 (GRCh37)
Canonical SPDI:: NC_000023.11:137033295:G:T
Gene:: GPR101 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.137033296G>T, NC_000023.10:g.136115455G>T, NG_016367.2:g.5700C>A

Select item 14907821992.

rs1490782199 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:137031375 (GRCh38)
X:136113534 (GRCh37)
Canonical SPDI:: NC_000023.11:137031374:G:C
Gene:: GPR101 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000023.11:g.137031375G>C, NC_000023.10:g.136113534G>C, NG_016367.2:g.7621C>G, NM_054021.2:c.300C>G, NM_054021.1:c.300C>G, NP_473362.1:p.Asn100Lys

Select item 14900354103.

rs1490035410 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:137032635 (GRCh38)
X:136114794 (GRCh37)
Canonical SPDI:: NC_000023.11:137032634:G:A
Gene:: GPR101 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000029/3 (GnomAD)
HGVS:: NC_000023.11:g.137032635G>A, NC_000023.10:g.136114794G>A, NG_016367.2:g.6361C>T

Select item 14898724544.

rs1489872454 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:137032022 (GRCh38)
X:136114181 (GRCh37)
Canonical SPDI:: NC_000023.11:137032021:T:C
Gene:: GPR101 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.137032022T>C, NC_000023.10:g.136114181T>C, NG_016367.2:g.6974A>G

Select item 14894021745.

rs1489402174 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:137030298 (GRCh38)
X:136112457 (GRCh37)
Canonical SPDI:: NC_000023.11:137030297:C:G
Gene:: GPR101 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: G=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.137030298C>G, NC_000023.10:g.136112457C>G, NG_016367.2:g.8698G>C, NM_054021.2:c.1377G>C, NM_054021.1:c.1377G>C, NP_473362.1:p.Lys459Asn

Select item 14883183256.

rs1488318325 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:137031289 (GRCh38)
X:136113448 (GRCh37)
Canonical SPDI:: NC_000023.11:137031288:C:T
Gene:: GPR101 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.137031289C>T, NC_000023.10:g.136113448C>T, NG_016367.2:g.7707G>A, NM_054021.2:c.386G>A, NM_054021.1:c.386G>A, NP_473362.1:p.Arg129His

Select item 14883150387.

rs1488315038 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:137029773 (GRCh38)
X:136111932 (GRCh37)
Canonical SPDI:: NC_000023.11:137029772:C:T
Gene:: GPR101 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000023.11:g.137029773C>T, NC_000023.10:g.136111932C>T, NG_016367.2:g.9223G>A, NM_054021.2:c.*375G>A

Select item 14875211248.

rs1487521124 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:137030896 (GRCh38)
X:136113055 (GRCh37)
Canonical SPDI:: NC_000023.11:137030895:C:T
Gene:: GPR101 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: T=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.137030896C>T, NC_000023.10:g.136113055C>T, NG_016367.2:g.8100G>A, NM_054021.2:c.779G>A, NM_054021.1:c.779G>A, NP_473362.1:p.Ser260Asn

Select item 14874358589.

rs1487435858 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: X:137031247 (GRCh38)
X:136113406 (GRCh37)
Canonical SPDI:: NC_000023.11:137031246:A:G,NC_000023.11:137031246:A:T
Gene:: GPR101 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000102/2 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000011/2 (GnomAD_exomes)
HGVS:: NC_000023.11:g.137031247A>G, NC_000023.11:g.137031247A>T, NC_000023.10:g.136113406A>G, NC_000023.10:g.136113406A>T, NG_016367.2:g.7749T>C, NG_016367.2:g.7749T>A, NM_054021.2:c.428T>C, NM_054021.2:c.428T>A, NM_054021.1:c.428T>C, NM_054021.1:c.428T>A, NP_473362.1:p.Met143Thr, NP_473362.1:p.Met143Lys

Select item 148530705610.

rs1485307056 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:137031804 (GRCh38)
X:136113963 (GRCh37)
Canonical SPDI:: NC_000023.11:137031803:C:T
Gene:: GPR101 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.137031804C>T, NC_000023.10:g.136113963C>T, NG_016367.2:g.7192G>A

Select item 148518146611.

rs1485181466 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: X:137031994 (GRCh38)
X:136114153 (GRCh37)
Canonical SPDI:: NC_000023.11:137031993:G:A,NC_000023.11:137031993:G:T
Gene:: GPR101 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000019/2 (GnomAD)
HGVS:: NC_000023.11:g.137031994G>A, NC_000023.11:g.137031994G>T, NC_000023.10:g.136114153G>A, NC_000023.10:g.136114153G>T, NG_016367.2:g.7002C>T, NG_016367.2:g.7002C>A

Select item 148497758312.

rs1484977583 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:137033297 (GRCh38)
X:136115456 (GRCh37)
Canonical SPDI:: NC_000023.11:137033296:G:C
Gene:: GPR101 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.000224/1 (ALFA)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.137033297G>C, NC_000023.10:g.136115456G>C, NG_016367.2:g.5699C>G

Select item 148335122413.

rs1483351224 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:137031133 (GRCh38)
X:136113292 (GRCh37)
Canonical SPDI:: NC_000023.11:137031132:A:G
Gene:: GPR101 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000023.11:g.137031133A>G, NC_000023.10:g.136113292A>G, NG_016367.2:g.7863T>C, NM_054021.2:c.542T>C, NM_054021.1:c.542T>C, NP_473362.1:p.Leu181Pro

Select item 148194302614.

rs1481943026 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTGT>- [Show Flanks]
Chromosome:: X:137032305 (GRCh38)
X:136114464 (GRCh37)
Canonical SPDI:: NC_000023.11:137032301:TGTTTGT:TGT
Gene:: GPR101 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGT=0./0 (ALFA)
-=0.000048/5 (GnomAD)
-=0.000087/23 (TOPMED)
HGVS:: NC_000023.11:g.137032305_137032308del, NC_000023.10:g.136114464_136114467del, NG_016367.2:g.6691_6694del

Select item 148147078015.

rs1481470780 has merged into rs1178446717 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAGA>-,GA [Show Flanks]
Chromosome:: X:137033402 (GRCh38)
X:136115561 (GRCh37)
Canonical SPDI:: NC_000023.11:137033398:AGAGAGA:AGA,NC_000023.11:137033398:AGAGAGA:AGAGA
Gene:: GPR101 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGAGA=0./0 (ALFA)
-=0.00002/2 (GnomAD)
HGVS:: NC_000023.11:g.137033400GA[1], NC_000023.11:g.137033400GA[2], NC_000023.10:g.136115559GA[1], NC_000023.10:g.136115559GA[2], NG_016367.2:g.5592CT[1], NG_016367.2:g.5592CT[2]

Select item 148068173116.

rs1480681731 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:137032012 (GRCh38)
X:136114171 (GRCh37)
Canonical SPDI:: NC_000023.11:137032011:T:C
Gene:: GPR101 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.137032012T>C, NC_000023.10:g.136114171T>C, NG_016367.2:g.6984A>G

Select item 147951268517.

rs1479512685 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: X:137032136 (GRCh38)
X:136114295 (GRCh37)
Canonical SPDI:: NC_000023.11:137032135:C:A,NC_000023.11:137032135:C:T
Gene:: GPR101 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
A=0.000078/1 (TOMMO)
A=0.000684/2 (KOREAN)
HGVS:: NC_000023.11:g.137032136C>A, NC_000023.11:g.137032136C>T, NC_000023.10:g.136114295C>A, NC_000023.10:g.136114295C>T, NG_016367.2:g.6860G>T, NG_016367.2:g.6860G>A

Select item 147846990518.

rs1478469905 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:137029922 (GRCh38)
X:136112081 (GRCh37)
Canonical SPDI:: NC_000023.11:137029921:T:C
Gene:: GPR101 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.137029922T>C, NC_000023.10:g.136112081T>C, NG_016367.2:g.9074A>G, NM_054021.2:c.*226A>G

Select item 147800589219.

rs1478005892 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:137030515 (GRCh38)
X:136112674 (GRCh37)
Canonical SPDI:: NC_000023.11:137030514:G:C
Gene:: GPR101 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000019/2 (GnomAD)
C=0.000023/6 (TOPMED)
HGVS:: NC_000023.11:g.137030515G>C, NC_000023.10:g.136112674G>C, NG_016367.2:g.8481C>G, NM_054021.2:c.1160C>G, NM_054021.1:c.1160C>G, NP_473362.1:p.Pro387Arg

Select item 147719766920.

rs1477197669 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:137033423 (GRCh38)
X:136115582 (GRCh37)
Canonical SPDI:: NC_000023.11:137033422:G:A
Gene:: GPR101 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000023.11:g.137033423G>A, NC_000023.10:g.136115582G>A, NG_016367.2:g.5573C>T

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