SNP Links for Gene (Select 83863) - SNP

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Links from Gene

Items: 1 to 20 of 85

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Select item 13760706931.

rs1376070693 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: Y:22300852 (GRCh38)
Y:24446999 (GRCh37)
Canonical SPDI:: NC_000024.10:22300851:C:G
Gene:: TTTY5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000024.10:g.22300852C>G, NC_000024.9:g.24446999C>G, NG_004755.2:g.489966C>G

Select item 13695929672.

rs1369592967 [Homo sapiens]

Variant type:: INS
Alleles:: ->T [Show Flanks]
Chromosome:: Y:22300702 (GRCh38)
Y:24446850 (GRCh37)
Canonical SPDI:: NC_000024.10:22300702::T
Gene:: TTTY5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.182/291 (1000Genomes)
HGVS:: NC_000024.10:g.22300702_22300703insT, NC_000024.9:g.24446849_24446850insT, NG_004755.2:g.489816_489817insT

Select item 13094441813.

rs1309444181 [Homo sapiens]

Variant type:: INS
Alleles:: ->T [Show Flanks]
Chromosome:: Y:22300704 (GRCh38)
Y:24446852 (GRCh37)
Canonical SPDI:: NC_000024.10:22300704::T
Gene:: TTTY5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.00116/14 (GnomAD)
HGVS:: NC_000024.10:g.22300704_22300705insT, NC_000024.9:g.24446851_24446852insT, NG_004755.2:g.489818_489819insT

Select item 10534881434.

rs1053488143 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: Y:22296619 (GRCh38)
Y:24442766 (GRCh37)
Canonical SPDI:: NC_000024.10:22296618:C:T
Gene:: TTTY5 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.00063/1 (1000Genomes)
T=0.00191/57 (GnomAD)
T=0.36842/14 (PRJEB36033)
HGVS:: NC_000024.10:g.22296619C>T, NC_000024.9:g.24442766C>T, NG_004755.2:g.485733C>T

Select item 10515336705.

rs1051533670 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:22296415 (GRCh38)
Y:24442562 (GRCh37)
Canonical SPDI:: NC_000024.10:22296414:G:A
Gene:: TTTY5 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
HGVS:: NC_000024.10:g.22296415G>A, NC_000024.9:g.24442562G>A, NG_004755.2:g.485529G>A

Select item 10468817806.

rs1046881780 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:22299619 (GRCh38)
Y:24445766 (GRCh37)
Canonical SPDI:: NC_000024.10:22299618:G:A
Gene:: TTTY5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000024.10:g.22299619G>A, NC_000024.9:g.24445766G>A, NG_004755.2:g.488733G>A

Select item 10450177587.

rs1045017758 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:22297819 (GRCh38)
Y:24443966 (GRCh37)
Canonical SPDI:: NC_000024.10:22297818:G:A
Gene:: TTTY5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: A=0.00016/5 (GnomAD)
HGVS:: NC_000024.10:g.22297819G>A, NC_000024.9:g.24443966G>A, NG_004755.2:g.486933G>A

Select item 10449650038.

rs1044965003 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: Y:22299292 (GRCh38)
Y:24445439 (GRCh37)
Canonical SPDI:: NC_000024.10:22299291:C:A,NC_000024.10:22299291:C:T
Gene:: TTTY5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by cluster
HGVS:: NC_000024.10:g.22299292C>A, NC_000024.10:g.22299292C>T, NC_000024.9:g.24445439C>A, NC_000024.9:g.24445439C>T, NG_004755.2:g.488406C>A, NG_004755.2:g.488406C>T

Select item 10384235769.

rs1038423576 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: Y:22299743 (GRCh38)
Y:24445890 (GRCh37)
Canonical SPDI:: NC_000024.10:22299742:C:G
Gene:: TTTY5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.0013/2 (1000Genomes)
HGVS:: NC_000024.10:g.22299743C>G, NC_000024.9:g.24445890C>G, NG_004755.2:g.488857C>G

Select item 103181543210.

rs1031815432 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: Y:22300150 (GRCh38)
Y:24446297 (GRCh37)
Canonical SPDI:: NC_000024.10:22300149:T:C
Gene:: TTTY5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000024.10:g.22300150T>C, NC_000024.9:g.24446297T>C, NG_004755.2:g.489264T>C

Select item 103010915911.

rs1030109159 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: Y:22300042 (GRCh38)
Y:24446189 (GRCh37)
Canonical SPDI:: NC_000024.10:22300041:A:G
Gene:: TTTY5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000024.10:g.22300042A>G, NC_000024.9:g.24446189A>G, NG_004755.2:g.489156A>G

Select item 102991527112.

rs1029915271 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: Y:22298643 (GRCh38)
Y:24444790 (GRCh37)
Canonical SPDI:: NC_000024.10:22298642:T:A
Gene:: TTTY5 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000024.10:g.22298643T>A, NC_000024.9:g.24444790T>A, NG_004755.2:g.487757T>A, NR_001541.1:n.234A>T, NM_031926.1:c.-377A>T

Select item 102573541813.

rs1025735418 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: Y:22297110 (GRCh38)
Y:24443257 (GRCh37)
Canonical SPDI:: NC_000024.10:22297109:C:T
Gene:: TTTY5 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.0003/9 (GnomAD)
HGVS:: NC_000024.10:g.22297110C>T, NC_000024.9:g.24443257C>T, NG_004755.2:g.486224C>T, NR_001541.1:n.1250G>A, NM_031926.1:c.*412G>A

Select item 101692623114.

rs1016926231 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: Y:22297281 (GRCh38)
Y:24443428 (GRCh37)
Canonical SPDI:: NC_000024.10:22297280:G:C
Gene:: TTTY5 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000024.10:g.22297281G>C, NC_000024.9:g.24443428G>C, NG_004755.2:g.486395G>C, NR_001541.1:n.1079C>G, NM_031926.1:c.*241C>G

Select item 101687532415.

rs1016875324 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: Y:22298374 (GRCh38)
Y:24444521 (GRCh37)
Canonical SPDI:: NC_000024.10:22298373:C:T
Gene:: TTTY5 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000024.10:g.22298374C>T, NC_000024.9:g.24444521C>T, NG_004755.2:g.487488C>T, NR_001541.1:n.503G>A, NM_031926.1:c.-108G>A

Select item 101219941716.

rs1012199417 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:22296735 (GRCh38)
Y:24442882 (GRCh37)
Canonical SPDI:: NC_000024.10:22296734:G:A
Gene:: TTTY5 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
HGVS:: NC_000024.10:g.22296735G>A, NC_000024.9:g.24442882G>A, NG_004755.2:g.485849G>A

Select item 100562344317.

rs1005623443 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: Y:22298113 (GRCh38)
Y:24444260 (GRCh37)
Canonical SPDI:: NC_000024.10:22298112:A:T
Gene:: TTTY5 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000024.10:g.22298113A>T, NC_000024.9:g.24444260A>T, NG_004755.2:g.487227A>T

Select item 100557123818.

rs1005571238 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: Y:22299711 (GRCh38)
Y:24445858 (GRCh37)
Canonical SPDI:: NC_000024.10:22299710:C:G
Gene:: TTTY5 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.0006/1 (1000Genomes)
HGVS:: NC_000024.10:g.22299711C>G, NC_000024.9:g.24445858C>G, NG_004755.2:g.488825C>G

Select item 100400804619.

rs1004008046 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: Y:22297080 (GRCh38)
Y:24443227 (GRCh37)
Canonical SPDI:: NC_000024.10:22297079:C:T
Gene:: TTTY5 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000024.10:g.22297080C>T, NC_000024.9:g.24443227C>T, NG_004755.2:g.486194C>T, NR_001541.1:n.1280G>A, NM_031926.1:c.*442G>A

Select item 100338246820.

rs1003382468 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:22298016 (GRCh38)
Y:24444163 (GRCh37)
Canonical SPDI:: NC_000024.10:22298015:G:A
Gene:: TTTY5 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: A=0.0006/1 (1000Genomes)
HGVS:: NC_000024.10:g.22298016G>A, NC_000024.9:g.24444163G>A, NG_004755.2:g.487130G>A