SNP Links for Gene (Select 8446) - SNP

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Select item 14915555811.

rs1491555581 has merged into rs34279043 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAA>-,A,AA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAAAA [Show Flanks]
Chromosome:: 2:73766321 (GRCh38)
2:73993448 (GRCh37)
Canonical SPDI:: NC_000002.12:73766309:AAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000002.12:73766309:AAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000002.12:73766309:AAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000002.12:73766309:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000002.12:73766309:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000002.12:73766309:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000002.12:73766309:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000002.12:73766309:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAA=0./0 (ALFA)
-=0.0022/5 (1000Genomes)
A=0.3628/209 (NorthernSweden)
A=0.475/19 (GENOME_DK)
HGVS:: NC_000002.12:g.73766321_73766323del, NC_000002.12:g.73766322_73766323del, NC_000002.12:g.73766323del, NC_000002.12:g.73766323dup, NC_000002.12:g.73766322_73766323dup, NC_000002.12:g.73766321_73766323dup, NC_000002.12:g.73766320_73766323dup, NC_000002.12:g.73766316_73766323dup, NC_000002.11:g.73993448_73993450del, NC_000002.11:g.73993449_73993450del, NC_000002.11:g.73993450del, NC_000002.11:g.73993450dup, NC_000002.11:g.73993449_73993450dup, NC_000002.11:g.73993448_73993450dup, NC_000002.11:g.73993447_73993450dup, NC_000002.11:g.73993443_73993450dup, NW_025791766.1:g.435819_435821del, NW_025791766.1:g.435820_435821del, NW_025791766.1:g.435821del, NW_025791766.1:g.435821dup, NW_025791766.1:g.435820_435821dup, NW_025791766.1:g.435819_435821dup, NW_025791766.1:g.435818_435821dup, NW_025791766.1:g.435814_435821dup

Select item 14913221742.

rs1491322174 has merged into rs1166863408 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAA>-,A,AA,AAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 2:73775885 (GRCh38)
2:74003012 (GRCh37)
Canonical SPDI:: NC_000002.12:73775864:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000002.12:73775864:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73775864:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73775864:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73775864:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73775864:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73775864:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73775864:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73775864:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73775864:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000002.12:g.73775885_73775888del, NC_000002.12:g.73775886_73775888del, NC_000002.12:g.73775887_73775888del, NC_000002.12:g.73775888del, NC_000002.12:g.73775888dup, NC_000002.12:g.73775887_73775888dup, NC_000002.12:g.73775886_73775888dup, NC_000002.12:g.73775882_73775888dup, NC_000002.12:g.73775878_73775888dup, NC_000002.12:g.73775876_73775888dup, NC_000002.11:g.74003012_74003015del, NC_000002.11:g.74003013_74003015del, NC_000002.11:g.74003014_74003015del, NC_000002.11:g.74003015del, NC_000002.11:g.74003015dup, NC_000002.11:g.74003014_74003015dup, NC_000002.11:g.74003013_74003015dup, NC_000002.11:g.74003009_74003015dup, NC_000002.11:g.74003005_74003015dup, NC_000002.11:g.74003003_74003015dup, NW_025791766.1:g.445383_445386del, NW_025791766.1:g.445384_445386del, NW_025791766.1:g.445385_445386del, NW_025791766.1:g.445386del, NW_025791766.1:g.445386dup, NW_025791766.1:g.445385_445386dup, NW_025791766.1:g.445384_445386dup, NW_025791766.1:g.445380_445386dup, NW_025791766.1:g.445376_445386dup, NW_025791766.1:g.445374_445386dup

Select item 14912748903.

rs1491274890 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 2:73766309 (GRCh38)
2:73993436 (GRCh37)
Canonical SPDI:: NC_000002.12:73766308:CA:
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000002.12:g.73766309_73766310del, NC_000002.11:g.73993436_73993437del, NW_025791766.1:g.435807_435808del

Select item 14911738334.

rs1491173833 [Homo sapiens]

Variant type:: DEL
Alleles:: TA>- [Show Flanks]
Chromosome:: 2:73775864 (GRCh38)
2:74002991 (GRCh37)
Canonical SPDI:: NC_000002.12:73775863:TA:
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.03692/438 (ALFA)
-=0.00876/127 (TOMMO)
-=0.04387/4138 (GnomAD)
HGVS:: NC_000002.12:g.73775864_73775865del, NC_000002.11:g.74002991_74002992del, NW_025791766.1:g.445362_445363del

Select item 14910268585.

rs1491026858 has merged into rs70965758 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAA>-,A,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 2:73776424 (GRCh38)
2:74003551 (GRCh37)
Canonical SPDI:: NC_000002.12:73776413:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000002.12:73776413:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000002.12:73776413:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000002.12:73776413:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000002.12:73776413:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000002.12:73776413:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000002.12:73776413:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73776413:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73776413:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73776413:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73776413:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73776413:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73776413:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000002.12:73776413:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000002.12:g.73776424_73776432del, NC_000002.12:g.73776425_73776432del, NC_000002.12:g.73776429_73776432del, NC_000002.12:g.73776431_73776432del, NC_000002.12:g.73776432del, NC_000002.12:g.73776432dup, NC_000002.12:g.73776431_73776432dup, NC_000002.12:g.73776430_73776432dup, NC_000002.12:g.73776429_73776432dup, NC_000002.12:g.73776428_73776432dup, NC_000002.12:g.73776427_73776432dup, NC_000002.12:g.73776426_73776432dup, NC_000002.12:g.73776425_73776432dup, NC_000002.12:g.73776423_73776432dup, NC_000002.11:g.74003551_74003559del, NC_000002.11:g.74003552_74003559del, NC_000002.11:g.74003556_74003559del, NC_000002.11:g.74003558_74003559del, NC_000002.11:g.74003559del, NC_000002.11:g.74003559dup, NC_000002.11:g.74003558_74003559dup, NC_000002.11:g.74003557_74003559dup, NC_000002.11:g.74003556_74003559dup, NC_000002.11:g.74003555_74003559dup, NC_000002.11:g.74003554_74003559dup, NC_000002.11:g.74003553_74003559dup, NC_000002.11:g.74003552_74003559dup, NC_000002.11:g.74003550_74003559dup, NW_025791766.1:g.445922_445930del, NW_025791766.1:g.445923_445930del, NW_025791766.1:g.445927_445930del, NW_025791766.1:g.445929_445930del, NW_025791766.1:g.445930del, NW_025791766.1:g.445930dup, NW_025791766.1:g.445929_445930dup, NW_025791766.1:g.445928_445930dup, NW_025791766.1:g.445927_445930dup, NW_025791766.1:g.445926_445930dup, NW_025791766.1:g.445925_445930dup, NW_025791766.1:g.445924_445930dup, NW_025791766.1:g.445923_445930dup, NW_025791766.1:g.445921_445930dup

Select item 14909567766.

rs1490956776 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 2:73765094 (GRCh38)
2:73992221 (GRCh37)
Canonical SPDI:: NC_000002.12:73765093:T:A,NC_000002.12:73765093:T:C
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000002.12:g.73765094T>A, NC_000002.12:g.73765094T>C, NC_000002.11:g.73992221T>A, NC_000002.11:g.73992221T>C, NW_025791766.1:g.434592T>A, NW_025791766.1:g.434592T>C

Select item 14907043257.

rs1490704325 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 2:73768969 (GRCh38)
2:73996096 (GRCh37)
Canonical SPDI:: NC_000002.12:73768968:A:C
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000019/5 (TOPMED)
HGVS:: NC_000002.12:g.73768969A>C, NC_000002.11:g.73996096A>C, NW_025791766.1:g.438467A>C

Select item 14906831348.

rs1490683134 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:73782128 (GRCh38)
2:74009255 (GRCh37)
Canonical SPDI:: NC_000002.12:73782127:A:G
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.73782128A>G, NC_000002.11:g.74009255A>G, NW_025791766.1:g.451626A>G

Select item 14903792929.

rs1490379292 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 2:73770479 (GRCh38)
2:73997606 (GRCh37)
Canonical SPDI:: NC_000002.12:73770478:C:A,NC_000002.12:73770478:C:T
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.00032/44 (GnomAD)
T=0.000476/126 (TOPMED)
HGVS:: NC_000002.12:g.73770479C>A, NC_000002.12:g.73770479C>T, NC_000002.11:g.73997606C>A, NC_000002.11:g.73997606C>T, NW_025791766.1:g.439977C>A, NW_025791766.1:g.439977C>T

Select item 149028752510.

rs1490287525 [Homo sapiens]

Variant type:: DEL
Alleles:: TTA>- [Show Flanks]
Chromosome:: 2:73775863 (GRCh38)
2:74002990 (GRCh37)
Canonical SPDI:: NC_000002.12:73775862:TTA:
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00219/26 (ALFA)
-=0.00043/28 (GnomAD)
HGVS:: NC_000002.12:g.73775863_73775865del, NC_000002.11:g.74002990_74002992del, NW_025791766.1:g.445361_445363del

Select item 149013607211.

rs1490136072 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:73764010 (GRCh38)
2:73991137 (GRCh37)
Canonical SPDI:: NC_000002.12:73764009:G:A
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.73764010G>A, NC_000002.11:g.73991137G>A, NW_025791766.1:g.433508G>A

Select item 149007135812.

rs1490071358 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:73761704 (GRCh38)
2:73988831 (GRCh37)
Canonical SPDI:: NC_000002.12:73761703:G:A
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.73761704G>A, NC_000002.11:g.73988831G>A, NW_025791766.1:g.431202G>A

Select item 148990504713.

rs1489905047 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 2:73766840 (GRCh38)
2:73993967 (GRCh37)
Canonical SPDI:: NC_000002.12:73766839:C:G,NC_000002.12:73766839:C:T
Gene:: DUSP11 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
HGVS:: NC_000002.12:g.73766840C>G, NC_000002.12:g.73766840C>T, NC_000002.11:g.73993967C>G, NC_000002.11:g.73993967C>T, NW_025791766.1:g.436338C>G, NW_025791766.1:g.436338C>T, NM_003584.3:c.605G>C, NM_003584.3:c.605G>A, NM_003584.2:c.746G>C, NM_003584.2:c.746G>A, NP_003575.3:p.Gly202Ala, NP_003575.3:p.Gly202Asp

Select item 148969662914.

rs1489696629 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:73770886 (GRCh38)
2:73998013 (GRCh37)
Canonical SPDI:: NC_000002.12:73770885:A:G
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.73770886A>G, NC_000002.11:g.73998013A>G, NW_025791766.1:g.440384A>G

Select item 148966695315.

rs1489666953 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:73770050 (GRCh38)
2:73997177 (GRCh37)
Canonical SPDI:: NC_000002.12:73770049:C:T
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000002.12:g.73770050C>T, NC_000002.11:g.73997177C>T, NW_025791766.1:g.439548C>T

Select item 148964933816.

rs1489649338 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 2:73762497 (GRCh38)
2:73989624 (GRCh37)
Canonical SPDI:: NC_000002.12:73762496:C:A
Gene:: DUSP11 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000029/4 (GnomAD)
A=0.000042/11 (TOPMED)
HGVS:: NC_000002.12:g.73762497C>A, NC_000002.11:g.73989624C>A, NW_025791766.1:g.431995C>A, NM_003584.3:c.*164G>T, NM_003584.2:c.*164G>T

Select item 148948574517.

rs1489485745 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>- [Show Flanks]
Chromosome:: 2:73773474 (GRCh38)
2:74000601 (GRCh37)
Canonical SPDI:: NC_000002.12:73773473:AA:A
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.73773475del, NC_000002.11:g.74000602del, NW_025791766.1:g.442973del

Select item 148941366218.

rs1489413662 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 2:73780305 (GRCh38)
2:74007432 (GRCh37)
Canonical SPDI:: NC_000002.12:73780304:C:G,NC_000002.12:73780304:C:T
Gene:: DUSP11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000021/3 (GnomAD)
HGVS:: NC_000002.12:g.73780305C>G, NC_000002.12:g.73780305C>T, NC_000002.11:g.74007432C>G, NC_000002.11:g.74007432C>T, NW_025791766.1:g.449803C>G, NW_025791766.1:g.449803C>T

Select item 148940701919.

rs1489407019 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:73771637 (GRCh38)
2:73998764 (GRCh37)
Canonical SPDI:: NC_000002.12:73771636:G:A
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000092/12 (GnomAD)
A=0.001097/18 (TOMMO)
A=0.001718/11 (1000Genomes)
A=0.01166/34 (KOREAN)
HGVS:: NC_000002.12:g.73771637G>A, NC_000002.11:g.73998764G>A, NW_025791766.1:g.441135G>A

Select item 148934217320.

rs1489342173 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:73770377 (GRCh38)
2:73997504 (GRCh37)
Canonical SPDI:: NC_000002.12:73770376:T:C
Gene:: DUSP11 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000002.12:g.73770377T>C, NC_000002.11:g.73997504T>C, NW_025791766.1:g.439875T>C

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