SNP Links for Gene (Select 84720) - SNP

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Items: 1 to 20 of 1000

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Select item 14913885941.

rs1491388594 [Homo sapiens]

Variant type:: DEL
Alleles:: AG>- [Show Flanks]
Chromosome:: 9:35092370 (GRCh38)
9:35092367 (GRCh37)
Canonical SPDI:: NC_000009.12:35092369:AG:
Gene:: PIGO (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,frameshift_variant
Validated:: by frequency,by alfa
MAF:: -=0.0001/1 (ALFA)
HGVS:: NC_000009.12:g.35092370_35092371del, NC_000009.11:g.35092367_35092368del, NG_031990.1:g.9231_9232del, NM_032634.4:c.1516_1517del, NM_032634.3:c.1516_1517del, XM_005251619.4:c.1516_1517del, XM_005251619.3:c.1516_1517del, XM_005251619.2:c.1516_1517del, XM_005251619.1:c.1516_1517del, XM_047423974.1:c.1516_1517del, NP_116023.2:p.Leu506fs, XP_005251676.1:p.Leu506fs, XP_047279930.1:p.Leu506fs

Select item 14909330412.

rs1490933041 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:35089165 (GRCh38)
9:35089162 (GRCh37)
Canonical SPDI:: NC_000009.12:35089164:A:G
Gene:: PIGO (Varview)
Functional Consequence:: coding_sequence_variant,genic_downstream_transcript_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.35089165A>G, NC_000009.11:g.35089162A>G, NG_031990.1:g.12437T>C, NM_032634.4:c.3197T>C, NM_032634.3:c.3197T>C, NM_152850.4:c.1946T>C, NM_152850.3:c.1946T>C, NM_001201484.2:c.1946T>C, NM_001201484.1:c.1946T>C, XM_005251619.4:c.3197T>C, XM_005251619.3:c.3197T>C, XM_005251619.2:c.3197T>C, XM_005251619.1:c.3197T>C, NP_116023.2:p.Ile1066Thr, NP_690577.2:p.Ile649Thr, NP_001188413.1:p.Ile649Thr, XP_005251676.1:p.Ile1066Thr

Select item 14901513663.

rs1490151366 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 9:35097514 (GRCh38)
9:35097511 (GRCh37)
Canonical SPDI:: NC_000009.12:35097513:A:T
Gene:: PIGO (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.35097514A>T, NC_000009.11:g.35097511A>T, NG_031990.1:g.4088T>A

Select item 14899929934.

rs1489992993 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:35095336 (GRCh38)
9:35095333 (GRCh37)
Canonical SPDI:: NC_000009.12:35095335:G:A
Gene:: PIGO (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Clinical significance:: uncertain-significance
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.35095336G>A, NC_000009.11:g.35095333G>A, NG_031990.1:g.6266C>T, NM_032634.4:c.230C>T, NM_032634.3:c.230C>T, NM_152850.4:c.230C>T, NM_152850.3:c.230C>T, NM_001201484.2:c.230C>T, NM_001201484.1:c.230C>T, XM_005251619.4:c.230C>T, XM_005251619.3:c.230C>T, XM_005251619.2:c.230C>T, XM_005251619.1:c.230C>T, XM_047423974.1:c.230C>T, NP_116023.2:p.Ala77Val, NP_690577.2:p.Ala77Val, NP_001188413.1:p.Ala77Val, XP_005251676.1:p.Ala77Val, XP_047279930.1:p.Ala77Val

Select item 14899073325.

rs1489907332 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 9:35098057 (GRCh38)
9:35098054 (GRCh37)
Canonical SPDI:: NC_000009.12:35098056:T:G
Gene:: PIGO (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.35098057T>G, NC_000009.11:g.35098054T>G, NG_031990.1:g.3545A>C

Select item 14896615076.

rs1489661507 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 9:35091807 (GRCh38)
9:35091804 (GRCh37)
Canonical SPDI:: NC_000009.12:35091806:G:T
Gene:: PIGO (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant
Clinical significance:: uncertain-significance
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000028/1 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.35091807G>T, NC_000009.11:g.35091804G>T, NG_031990.1:g.9795C>A, NM_032634.4:c.2080C>A, NM_032634.3:c.2080C>A, XM_005251619.4:c.2080C>A, XM_005251619.3:c.2080C>A, XM_005251619.2:c.2080C>A, XM_005251619.1:c.2080C>A, XM_047423974.1:c.2080C>A, NP_116023.2:p.Leu694Ile, XP_005251676.1:p.Leu694Ile, XP_047279930.1:p.Leu694Ile

Select item 14891257027.

rs1489125702 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 9:35096630 (GRCh38)
9:35096627 (GRCh37)
Canonical SPDI:: NC_000009.12:35096629:G:C
Gene:: PIGO (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.35096630G>C, NC_000009.11:g.35096627G>C, NG_031990.1:g.4972C>G

Select item 14890734638.

rs1489073463 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 9:35095772 (GRCh38)
9:35095769 (GRCh37)
Canonical SPDI:: NC_000009.12:35095771:G:T
Gene:: PIGO (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
HGVS:: NC_000009.12:g.35095772G>T, NC_000009.11:g.35095769G>T, NG_031990.1:g.5830C>A

Select item 14889537319.

rs1488953731 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:35095859 (GRCh38)
9:35095856 (GRCh37)
Canonical SPDI:: NC_000009.12:35095858:C:T
Gene:: PIGO (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.35095859C>T, NC_000009.11:g.35095856C>T, NG_031990.1:g.5743G>A

Select item 148886965610.

rs1488869656 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 9:35092268 (GRCh38)
9:35092265 (GRCh37)
Canonical SPDI:: NC_000009.12:35092267:G:T
Gene:: PIGO (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant
Clinical significance:: uncertain-significance
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000009.12:g.35092268G>T, NC_000009.11:g.35092265G>T, NG_031990.1:g.9334C>A, NM_032634.4:c.1619C>A, NM_032634.3:c.1619C>A, XM_005251619.4:c.1619C>A, XM_005251619.3:c.1619C>A, XM_005251619.2:c.1619C>A, XM_005251619.1:c.1619C>A, XM_047423974.1:c.1619C>A, NP_116023.2:p.Ala540Glu, XP_005251676.1:p.Ala540Glu, XP_047279930.1:p.Ala540Glu

Select item 148879632211.

rs1488796322 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:35086608 (GRCh38)
9:35086605 (GRCh37)
Canonical SPDI:: NC_000009.12:35086607:G:A
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.35086608G>A, NC_000009.11:g.35086605G>A

Select item 148876563812.

rs1488765638 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:35085310 (GRCh38)
9:35085307 (GRCh37)
Canonical SPDI:: NC_000009.12:35085309:G:A
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000026/7 (TOPMED)
A=0.000036/5 (GnomAD)
HGVS:: NC_000009.12:g.35085310G>A, NC_000009.11:g.35085307G>A

Select item 148872471313.

rs1488724713 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 9:35096236 (GRCh38)
9:35096233 (GRCh37)
Canonical SPDI:: NC_000009.12:35096235:C:A,NC_000009.12:35096235:C:T
Gene:: PIGO (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000009.12:g.35096236C>A, NC_000009.12:g.35096236C>T, NC_000009.11:g.35096233C>A, NC_000009.11:g.35096233C>T, NG_031990.1:g.5366G>T, NG_031990.1:g.5366G>A, NM_032634.4:c.-83G>T, NM_032634.4:c.-83G>A, NM_032634.3:c.-83G>T, NM_032634.3:c.-83G>A, NM_001201484.2:c.-181G>T, NM_001201484.2:c.-181G>A, NM_001201484.1:c.-181G>T, NM_001201484.1:c.-181G>A

Select item 148855390814.

rs1488553908 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:35094383 (GRCh38)
9:35094380 (GRCh37)
Canonical SPDI:: NC_000009.12:35094382:C:T
Gene:: PIGO (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.35094383C>T, NC_000009.11:g.35094380C>T, NG_031990.1:g.7219G>A

Select item 148822781215.

rs1488227812 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:35093341 (GRCh38)
9:35093338 (GRCh37)
Canonical SPDI:: NC_000009.12:35093340:T:C
Gene:: PIGO (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.35093341T>C, NC_000009.11:g.35093338T>C, NG_031990.1:g.8261A>G

Select item 148790735616.

rs1487907356 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:35093436 (GRCh38)
9:35093433 (GRCh37)
Canonical SPDI:: NC_000009.12:35093435:G:A
Gene:: PIGO (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.35093436G>A, NC_000009.11:g.35093433G>A, NG_031990.1:g.8166C>T, NM_032634.4:c.924C>T, NM_032634.3:c.924C>T, NM_152850.4:c.924C>T, NM_152850.3:c.924C>T, NM_001201484.2:c.924C>T, NM_001201484.1:c.924C>T, XM_005251619.4:c.924C>T, XM_005251619.3:c.924C>T, XM_005251619.2:c.924C>T, XM_005251619.1:c.924C>T, XM_047423974.1:c.924C>T

Select item 148782766017.

rs1487827660 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:35088702 (GRCh38)
9:35088699 (GRCh37)
Canonical SPDI:: NC_000009.12:35088701:T:C
Gene:: PIGO (Varview)
Functional Consequence:: genic_downstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.35088702T>C, NC_000009.11:g.35088699T>C, NG_031990.1:g.12900A>G, NM_032634.4:c.*390A>G, NM_032634.3:c.*390A>G, NM_152850.4:c.*390A>G, NM_152850.3:c.*390A>G, NM_001201484.2:c.*390A>G, NM_001201484.1:c.*390A>G, XM_005251619.4:c.*390A>G, XM_005251619.3:c.*390A>G, XM_005251619.2:c.*390A>G, XM_005251619.1:c.*390A>G

Select item 148781161218.

rs1487811612 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:35085270 (GRCh38)
9:35085267 (GRCh37)
Canonical SPDI:: NC_000009.12:35085269:T:C
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.35085270T>C, NC_000009.11:g.35085267T>C

Select item 148763986019.

rs1487639860 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:35093053 (GRCh38)
9:35093050 (GRCh37)
Canonical SPDI:: NC_000009.12:35093052:C:T
Gene:: PIGO (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000009.12:g.35093053C>T, NC_000009.11:g.35093050C>T, NG_031990.1:g.8549G>A, NM_032634.4:c.1096G>A, NM_032634.3:c.1096G>A, NM_152850.4:c.1096G>A, NM_152850.3:c.1096G>A, NM_001201484.2:c.1096G>A, NM_001201484.1:c.1096G>A, XM_005251619.4:c.1096G>A, XM_005251619.3:c.1096G>A, XM_005251619.2:c.1096G>A, XM_005251619.1:c.1096G>A, XM_047423974.1:c.1096G>A, NP_116023.2:p.Ala366Thr, NP_690577.2:p.Ala366Thr, NP_001188413.1:p.Ala366Thr, XP_005251676.1:p.Ala366Thr, XP_047279930.1:p.Ala366Thr

Select item 148749988520.

rs1487499885 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:35088138 (GRCh38)
9:35088135 (GRCh37)
Canonical SPDI:: NC_000009.12:35088137:G:A
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.35088138G>A, NC_000009.11:g.35088135G>A, NG_031990.1:g.13464C>T

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