Links from Gene
Items: 1 to 20 of 7022
1.
rs1491583801 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- G>-,GG
[Show Flanks]
- Chromosome:
- 17:73231844
(GRCh38)
17:71227983
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73231843:GGGGGG:GGGGG,NC_000017.11:73231843:GGGGGG:GGGGGGG
- Gene:
- C17orf80 (Varview), FAM104A (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GGGGGGG=0./0
(
ALFA)
-=0.000021/3
(GnomAD)
- HGVS:
2.
rs1491537724 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->CACA
[Show Flanks]
- Chromosome:
- 17:73224994
(GRCh38)
17:71221134
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73224994::CACA
- Gene:
- FAM104A (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CACA=0.061969/277
(
ALFA)
CACA=0.050915/6911
(GnomAD)
- HGVS:
3.
rs1491522511 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->ATGGC
[Show Flanks]
- Chromosome:
- 17:73220510
(GRCh38)
17:71216650
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73220510:C:CATGGC
- Gene:
- FAM104A (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency
- MAF:
CATGG=0.000007/1
(GnomAD)
- HGVS:
5.
rs1491510924 has merged into rs11454294 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAA>-,AA,AAA,AAAAAA,AAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 17:73222046
(GRCh38)
17:71218185
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73222035:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- FAM104A (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAA=0./0
(
ALFA)
-=0.0069/34
(1000Genomes)
- HGVS:
NC_000017.11:g.73222046_73222057del, NC_000017.11:g.73222048_73222057del, NC_000017.11:g.73222049_73222057del, NC_000017.11:g.73222052_73222057del, NC_000017.11:g.73222053_73222057del, NC_000017.11:g.73222055_73222057del, NC_000017.11:g.73222056_73222057del, NC_000017.11:g.73222057del, NC_000017.11:g.73222057dup, NC_000017.11:g.73222056_73222057dup, NC_000017.11:g.73222055_73222057dup, NC_000017.11:g.73222054_73222057dup, NC_000017.11:g.73222053_73222057dup, NC_000017.11:g.73222052_73222057dup, NC_000017.11:g.73222051_73222057dup, NC_000017.11:g.73222057_73222058insAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000017.10:g.71218185_71218196del, NC_000017.10:g.71218187_71218196del, NC_000017.10:g.71218188_71218196del, NC_000017.10:g.71218191_71218196del, NC_000017.10:g.71218192_71218196del, NC_000017.10:g.71218194_71218196del, NC_000017.10:g.71218195_71218196del, NC_000017.10:g.71218196del, NC_000017.10:g.71218196dup, NC_000017.10:g.71218195_71218196dup, NC_000017.10:g.71218194_71218196dup, NC_000017.10:g.71218193_71218196dup, NC_000017.10:g.71218192_71218196dup, NC_000017.10:g.71218191_71218196dup, NC_000017.10:g.71218190_71218196dup, NC_000017.10:g.71218196_71218197insAAAAAAAAAAAAAAAAAAAAAAAAAAAA
8.
rs1491317355 has merged into rs869044764 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTT>-,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 17:73225907
(GRCh38)
17:71222046
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000017.11:73225899:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- FAM104A (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000017.11:g.73225907_73225917del, NC_000017.11:g.73225909_73225917del, NC_000017.11:g.73225910_73225917del, NC_000017.11:g.73225911_73225917del, NC_000017.11:g.73225912_73225917del, NC_000017.11:g.73225913_73225917del, NC_000017.11:g.73225914_73225917del, NC_000017.11:g.73225915_73225917del, NC_000017.11:g.73225916_73225917del, NC_000017.11:g.73225917del, NC_000017.11:g.73225917dup, NC_000017.11:g.73225916_73225917dup, NC_000017.11:g.73225915_73225917dup, NC_000017.11:g.73225914_73225917dup, NC_000017.11:g.73225913_73225917dup, NC_000017.11:g.73225912_73225917dup, NC_000017.11:g.73225911_73225917dup, NC_000017.11:g.73225910_73225917dup, NC_000017.10:g.71222046_71222056del, NC_000017.10:g.71222048_71222056del, NC_000017.10:g.71222049_71222056del, NC_000017.10:g.71222050_71222056del, NC_000017.10:g.71222051_71222056del, NC_000017.10:g.71222052_71222056del, NC_000017.10:g.71222053_71222056del, NC_000017.10:g.71222054_71222056del, NC_000017.10:g.71222055_71222056del, NC_000017.10:g.71222056del, NC_000017.10:g.71222056dup, NC_000017.10:g.71222055_71222056dup, NC_000017.10:g.71222054_71222056dup, NC_000017.10:g.71222053_71222056dup, NC_000017.10:g.71222052_71222056dup, NC_000017.10:g.71222051_71222056dup, NC_000017.10:g.71222050_71222056dup, NC_000017.10:g.71222049_71222056dup
9.
rs1491298033 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- GG>-
[Show Flanks]
- Chromosome:
- 17:73224994
(GRCh38)
17:71221133
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73224993:GG:
- Gene:
- FAM104A (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.00014/4
(TOMMO)
- HGVS:
10.
rs1491281538 has merged into rs1199167715 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAA>-,A,AA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAA
[Show Flanks]
- Chromosome:
- 17:73225866
(GRCh38)
17:71222005
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73225861:AAAAAAA:AAAA,NC_000017.11:73225861:AAAAAAA:AAAAA,NC_000017.11:73225861:AAAAAAA:AAAAAA,NC_000017.11:73225861:AAAAAAA:AAAAAAAA,NC_000017.11:73225861:AAAAAAA:AAAAAAAAA,NC_000017.11:73225861:AAAAAAA:AAAAAAAAAA,NC_000017.11:73225861:AAAAAAA:AAAAAAAAAAA,NC_000017.11:73225861:AAAAAAA:AAAAAAAAAAAAA
- Gene:
- FAM104A (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000017.11:g.73225866_73225868del, NC_000017.11:g.73225867_73225868del, NC_000017.11:g.73225868del, NC_000017.11:g.73225868dup, NC_000017.11:g.73225867_73225868dup, NC_000017.11:g.73225866_73225868dup, NC_000017.11:g.73225865_73225868dup, NC_000017.11:g.73225863_73225868dup, NC_000017.10:g.71222005_71222007del, NC_000017.10:g.71222006_71222007del, NC_000017.10:g.71222007del, NC_000017.10:g.71222007dup, NC_000017.10:g.71222006_71222007dup, NC_000017.10:g.71222005_71222007dup, NC_000017.10:g.71222004_71222007dup, NC_000017.10:g.71222002_71222007dup
11.
rs1491272596 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AT>-
[Show Flanks]
- Chromosome:
- 17:73207114
(GRCh38)
17:71203253
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73207113:AT:
- Gene:
- COG1 (Varview), FAM104A (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
12.
rs1491219485 has merged into rs869239366 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 17:73222791
(GRCh38)
17:71218931
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73222791:G:GG
- Gene:
- FAM104A (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GG=0./0
(
ALFA)
G=0.00006/2
(GnomAD)
- HGVS:
13.
rs1491217087 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->AAAAAAAAAAAAAAAAT,AAAAAAAAAAAAAAAT,AAAAAAAAAAAT,AAAAAAAAAT,AAAAAAAAT,AAT
[Show Flanks]
- Chromosome:
- 17:73207114
(GRCh38)
17:71203254
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73207114::AAAAAAAAAAAAAAAAT,NC_000017.11:73207114::AAAAAAAAAAAAAAAT,NC_000017.11:73207114::AAAAAAAAAAAT,NC_000017.11:73207114::AAAAAAAAAT,NC_000017.11:73207114::AAAAAAAAT,NC_000017.11:73207114::AAT
- Gene:
- COG1 (Varview), FAM104A (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant,intron_variant
- Validated:
- by cluster
- HGVS:
NC_000017.11:g.73207114_73207115insAAAAAAAAAAAAAAAAT, NC_000017.11:g.73207114_73207115insAAAAAAAAAAAAAAAT, NC_000017.11:g.73207114_73207115insAAAAAAAAAAAT, NC_000017.11:g.73207114_73207115insAAAAAAAAAT, NC_000017.11:g.73207114_73207115insAAAAAAAAT, NC_000017.11:g.73207114_73207115insAAT, NC_000017.10:g.71203253_71203254insAAAAAAAAAAAAAAAAT, NC_000017.10:g.71203253_71203254insAAAAAAAAAAAAAAAT, NC_000017.10:g.71203253_71203254insAAAAAAAAAAAT, NC_000017.10:g.71203253_71203254insAAAAAAAAAT, NC_000017.10:g.71203253_71203254insAAAAAAAAT, NC_000017.10:g.71203253_71203254insAAT, NG_008971.1:g.19081_19082insAAAAAAAAAAAAAAAAT, NG_008971.1:g.19081_19082insAAAAAAAAAAAAAAAT, NG_008971.1:g.19081_19082insAAAAAAAAAAAT, NG_008971.1:g.19081_19082insAAAAAAAAAT, NG_008971.1:g.19081_19082insAAAAAAAAT, NG_008971.1:g.19081_19082insAAT
16.
rs1491177414 has merged into rs1222794052 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAAA>-,AAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 17:73219200
(GRCh38)
17:71215339
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:73219191:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- FAM104A (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000017.11:g.73219200_73219213del, NC_000017.11:g.73219203_73219213del, NC_000017.11:g.73219205_73219213del, NC_000017.11:g.73219207_73219213del, NC_000017.11:g.73219208_73219213del, NC_000017.11:g.73219209_73219213del, NC_000017.11:g.73219210_73219213del, NC_000017.11:g.73219211_73219213del, NC_000017.11:g.73219212_73219213del, NC_000017.11:g.73219213del, NC_000017.11:g.73219213dup, NC_000017.11:g.73219212_73219213dup, NC_000017.11:g.73219211_73219213dup, NC_000017.11:g.73219210_73219213dup, NC_000017.11:g.73219209_73219213dup, NC_000017.11:g.73219208_73219213dup, NC_000017.11:g.73219192_73219213dup, NC_000017.11:g.73219213_73219214insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000017.10:g.71215339_71215352del, NC_000017.10:g.71215342_71215352del, NC_000017.10:g.71215344_71215352del, NC_000017.10:g.71215346_71215352del, NC_000017.10:g.71215347_71215352del, NC_000017.10:g.71215348_71215352del, NC_000017.10:g.71215349_71215352del, NC_000017.10:g.71215350_71215352del, NC_000017.10:g.71215351_71215352del, NC_000017.10:g.71215352del, NC_000017.10:g.71215352dup, NC_000017.10:g.71215351_71215352dup, NC_000017.10:g.71215350_71215352dup, NC_000017.10:g.71215349_71215352dup, NC_000017.10:g.71215348_71215352dup, NC_000017.10:g.71215347_71215352dup, NC_000017.10:g.71215331_71215352dup, NC_000017.10:g.71215352_71215353insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
18.
rs1490953507 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 17:73224835
(GRCh38)
17:71220974
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73224834:C:G
- Gene:
- FAM104A (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.003878/46
(
ALFA)
G=0.000033/4
(GnomAD)
G=0.078371/229
(KOREAN)
C=0.5/2
(SGDP_PRJ)
- HGVS:
19.
rs1490835232 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C
[Show Flanks]
- Chromosome:
- 17:73213084
(GRCh38)
17:71209223
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73213083:A:C
- Gene:
- FAM104A (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0.000084/1
(
ALFA)
C=0.000036/5
(GnomAD)
- HGVS:
20.
rs1490804283 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,C
[Show Flanks]
- Chromosome:
- 17:73224850
(GRCh38)
17:71220989
(GRCh37)
- Canonical SPDI:
- NC_000017.11:73224849:G:A,NC_000017.11:73224849:G:C
- Gene:
- FAM104A (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.00014/4
(TOMMO)
- HGVS: