Links from Gene
Items: 1 to 20 of 1000
3.
rs1491222186 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 5:150788633
(GRCh38)
5:150168195
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150788632:CA:
- Gene:
- SMIM3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by cluster
- MAF:
-=0./0
(ALSPAC)
-=0.0005/2
(TWINSUK)
- HGVS:
4.
rs1491151744 has merged into rs35401611 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTAAAATGTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTGAAAATGTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTCTGAAAATTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTAAAATTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 5:150785094
(GRCh38)
5:150164656
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTAAAATGTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTGAAAATGTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGAAAATTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAATTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785083:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- SMIM3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTT=0./0
(
ALFA)
-=0./0
(GENOME_DK)
- HGVS:
NC_000005.10:g.150785094_150785105del, NC_000005.10:g.150785095_150785105del, NC_000005.10:g.150785096_150785105del, NC_000005.10:g.150785097_150785105del, NC_000005.10:g.150785098_150785105del, NC_000005.10:g.150785099_150785105del, NC_000005.10:g.150785101_150785105del, NC_000005.10:g.150785102_150785105del, NC_000005.10:g.150785103_150785105del, NC_000005.10:g.150785104_150785105del, NC_000005.10:g.150785105del, NC_000005.10:g.150785105dup, NC_000005.10:g.150785104_150785105dup, NC_000005.10:g.150785084_150785105T[24]A[4]TGTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000005.10:g.150785103_150785105dup, NC_000005.10:g.150785084_150785105T[25]AATTTTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000005.10:g.150785084_150785105T[25]GAAAATGTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000005.10:g.150785102_150785105dup, NC_000005.10:g.150785100_150785105dup, NC_000005.10:g.150785099_150785105dup, NC_000005.10:g.150785098_150785105dup, NC_000005.10:g.150785097_150785105dup, NC_000005.10:g.150785084_150785105T[32]CTGAAAATTTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000005.10:g.150785095_150785105dup, NC_000005.10:g.150785094_150785105dup, NC_000005.10:g.150785093_150785105dup, NC_000005.10:g.150785084_150785105T[35]A[4]T[27], NC_000005.10:g.150785092_150785105dup, NC_000005.10:g.150785091_150785105dup, NC_000005.10:g.150785090_150785105dup, NC_000005.10:g.150785089_150785105dup, NC_000005.10:g.150785105_150785106insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000005.10:g.150785105_150785106insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000005.9:g.150164656_150164667del, NC_000005.9:g.150164657_150164667del, NC_000005.9:g.150164658_150164667del, NC_000005.9:g.150164659_150164667del, NC_000005.9:g.150164660_150164667del, NC_000005.9:g.150164661_150164667del, NC_000005.9:g.150164663_150164667del, NC_000005.9:g.150164664_150164667del, NC_000005.9:g.150164665_150164667del, NC_000005.9:g.150164666_150164667del, NC_000005.9:g.150164667del, NC_000005.9:g.150164667dup, NC_000005.9:g.150164666_150164667dup, NC_000005.9:g.150164646_150164667T[24]A[4]TGTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000005.9:g.150164665_150164667dup, NC_000005.9:g.150164646_150164667T[25]AATTTTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000005.9:g.150164646_150164667T[25]GAAAATGTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000005.9:g.150164664_150164667dup, NC_000005.9:g.150164662_150164667dup, NC_000005.9:g.150164661_150164667dup, NC_000005.9:g.150164660_150164667dup, NC_000005.9:g.150164659_150164667dup, NC_000005.9:g.150164646_150164667T[32]CTGAAAATTTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000005.9:g.150164657_150164667dup, NC_000005.9:g.150164656_150164667dup, NC_000005.9:g.150164655_150164667dup, NC_000005.9:g.150164646_150164667T[35]A[4]T[27], NC_000005.9:g.150164654_150164667dup, NC_000005.9:g.150164653_150164667dup, NC_000005.9:g.150164652_150164667dup, NC_000005.9:g.150164651_150164667dup, NC_000005.9:g.150164667_150164668insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000005.9:g.150164667_150164668insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
5.
rs1491082409 has merged into rs755904476 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GG>-
[Show Flanks]
- Chromosome:
- 5:150776435
(GRCh38)
5:150155997
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150776433:GGG:G
- Gene:
- LOC124901110 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.000671/3
(
ALFA)
-=0.000335/47
(GnomAD)
-=0.00067/3
(Estonian)
- HGVS:
6.
rs1491031262 has merged into rs35273478 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTGGTTTTCTTCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 5:150785590
(GRCh38)
5:150165152
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTGGTTTTCTTCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:150785580:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- SMIM3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTT=0./0
(
ALFA)
TTTTTTTTTTT=0./0
(GENOME_DK)
- HGVS:
NC_000005.10:g.150785590_150785600del, NC_000005.10:g.150785591_150785600del, NC_000005.10:g.150785592_150785600del, NC_000005.10:g.150785593_150785600del, NC_000005.10:g.150785594_150785600del, NC_000005.10:g.150785595_150785600del, NC_000005.10:g.150785596_150785600del, NC_000005.10:g.150785598_150785600del, NC_000005.10:g.150785599_150785600del, NC_000005.10:g.150785600del, NC_000005.10:g.150785600dup, NC_000005.10:g.150785599_150785600dup, NC_000005.10:g.150785581_150785600T[22]GGTTTTCTTCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000005.10:g.150785598_150785600dup, NC_000005.10:g.150785597_150785600dup, NC_000005.10:g.150785581_150785600T[24]ATTTTTTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000005.10:g.150785596_150785600dup, NC_000005.10:g.150785595_150785600dup, NC_000005.10:g.150785594_150785600dup, NC_000005.10:g.150785593_150785600dup, NC_000005.10:g.150785592_150785600dup, NC_000005.10:g.150785591_150785600dup, NC_000005.10:g.150785590_150785600dup, NC_000005.10:g.150785589_150785600dup, NC_000005.10:g.150785588_150785600dup, NC_000005.10:g.150785587_150785600dup, NC_000005.10:g.150785586_150785600dup, NC_000005.10:g.150785585_150785600dup, NC_000005.10:g.150785581_150785600dup, NC_000005.10:g.150785600_150785601insTTTTTTTTTTTTTTTTTTTTTTT, NC_000005.10:g.150785600_150785601insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000005.10:g.150785600_150785601insTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000005.10:g.150785600_150785601insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000005.9:g.150165152_150165162del, NC_000005.9:g.150165153_150165162del, NC_000005.9:g.150165154_150165162del, NC_000005.9:g.150165155_150165162del, NC_000005.9:g.150165156_150165162del, NC_000005.9:g.150165157_150165162del, NC_000005.9:g.150165158_150165162del, NC_000005.9:g.150165160_150165162del, NC_000005.9:g.150165161_150165162del, NC_000005.9:g.150165162del, NC_000005.9:g.150165162dup, NC_000005.9:g.150165161_150165162dup, NC_000005.9:g.150165143_150165162T[22]GGTTTTCTTCAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000005.9:g.150165160_150165162dup, NC_000005.9:g.150165159_150165162dup, NC_000005.9:g.150165143_150165162T[24]ATTTTTTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000005.9:g.150165158_150165162dup, NC_000005.9:g.150165157_150165162dup, NC_000005.9:g.150165156_150165162dup, NC_000005.9:g.150165155_150165162dup, NC_000005.9:g.150165154_150165162dup, NC_000005.9:g.150165153_150165162dup, NC_000005.9:g.150165152_150165162dup, NC_000005.9:g.150165151_150165162dup, NC_000005.9:g.150165150_150165162dup, NC_000005.9:g.150165149_150165162dup, NC_000005.9:g.150165148_150165162dup, NC_000005.9:g.150165147_150165162dup, NC_000005.9:g.150165143_150165162dup, NC_000005.9:g.150165162_150165163insTTTTTTTTTTTTTTTTTTTTTTT, NC_000005.9:g.150165162_150165163insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000005.9:g.150165162_150165163insTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000005.9:g.150165162_150165163insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
7.
rs1490955677 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->T
[Show Flanks]
- Chromosome:
- 5:150787558
(GRCh38)
5:150167121
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150787558:T:TT
- Gene:
- SMIM3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TT=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
T=0.000007/1
(GnomAD)
- HGVS:
8.
rs1490520400 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 5:150796521
(GRCh38)
5:150176083
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150796520:T:C
- Gene:
- SMIM3 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000008/2
(TOPMED)
C=0.000014/2
(GnomAD)
- HGVS:
9.
rs1490507794 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 5:150787319
(GRCh38)
5:150166881
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150787318:C:T
- Gene:
- SMIM3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
- HGVS:
10.
rs1490492041 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 5:150789890
(GRCh38)
5:150169452
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150789889:T:G
- Gene:
- SMIM3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
- HGVS:
11.
rs1490460411 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 5:150786890
(GRCh38)
5:150166452
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150786889:C:T
- Gene:
- SMIM3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000011/3
(TOPMED)
T=0.000029/4
(GnomAD)
- HGVS:
12.
rs1490203789 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C
[Show Flanks]
- Chromosome:
- 5:150780873
(GRCh38)
5:150160435
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150780872:A:C
- Gene:
- SMIM3 (Varview), LOC124901110 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
13.
rs1490157858 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 5:150792276
(GRCh38)
5:150171838
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150792275:G:A
- Gene:
- SMIM3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000014/2
(GnomAD)
A=0.000015/4
(TOPMED)
- HGVS:
14.
rs1489847399 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 5:150779398
(GRCh38)
5:150158960
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150779397:T:G
- Gene:
- SMIM3 (Varview), LOC124901110 (Varview)
- Functional Consequence:
- 5_prime_UTR_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS:
15.
rs1489720947 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 5:150793667
(GRCh38)
5:150173229
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150793666:C:A
- Gene:
- SMIM3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
- HGVS:
17.
rs1489259632 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 5:150784790
(GRCh38)
5:150164352
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150784789:A:G
- Gene:
- SMIM3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
- HGVS:
18.
rs1489251700 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C
[Show Flanks]
- Chromosome:
- 5:150786139
(GRCh38)
5:150165701
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150786138:A:C
- Gene:
- SMIM3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000014/2
(GnomAD)
C=0.000015/4
(TOPMED)
- HGVS:
19.
rs1488817487 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,T
[Show Flanks]
- Chromosome:
- 5:150792622
(GRCh38)
5:150172184
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150792621:C:A,NC_000005.10:150792621:C:T
- Gene:
- SMIM3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
T=0.000008/2
(TOPMED)
- HGVS:
20.
rs1488578940 has merged into rs568690176 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAAA>-,A,AA,AAA,AAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 5:150777580
(GRCh38)
5:150157142
(GRCh37)
- Canonical SPDI:
- NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:150777569:AAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- SMIM3 (Varview), LOC124901110 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAA=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.017372/87
(1000Genomes)
- HGVS:
NC_000005.10:g.150777580_150777593del, NC_000005.10:g.150777581_150777593del, NC_000005.10:g.150777582_150777593del, NC_000005.10:g.150777583_150777593del, NC_000005.10:g.150777584_150777593del, NC_000005.10:g.150777587_150777593del, NC_000005.10:g.150777588_150777593del, NC_000005.10:g.150777589_150777593del, NC_000005.10:g.150777590_150777593del, NC_000005.10:g.150777591_150777593del, NC_000005.10:g.150777592_150777593del, NC_000005.10:g.150777593del, NC_000005.10:g.150777593dup, NC_000005.10:g.150777592_150777593dup, NC_000005.10:g.150777591_150777593dup, NC_000005.10:g.150777590_150777593dup, NC_000005.10:g.150777589_150777593dup, NC_000005.9:g.150157142_150157155del, NC_000005.9:g.150157143_150157155del, NC_000005.9:g.150157144_150157155del, NC_000005.9:g.150157145_150157155del, NC_000005.9:g.150157146_150157155del, NC_000005.9:g.150157149_150157155del, NC_000005.9:g.150157150_150157155del, NC_000005.9:g.150157151_150157155del, NC_000005.9:g.150157152_150157155del, NC_000005.9:g.150157153_150157155del, NC_000005.9:g.150157154_150157155del, NC_000005.9:g.150157155del, NC_000005.9:g.150157155dup, NC_000005.9:g.150157154_150157155dup, NC_000005.9:g.150157153_150157155dup, NC_000005.9:g.150157152_150157155dup, NC_000005.9:g.150157151_150157155dup, XM_047417994.1:c.*897_*910del, XM_047417994.1:c.*898_*910del, XM_047417994.1:c.*899_*910del, XM_047417994.1:c.*900_*910del, XM_047417994.1:c.*901_*910del, XM_047417994.1:c.*904_*910del, XM_047417994.1:c.*905_*910del, XM_047417994.1:c.*906_*910del, XM_047417994.1:c.*907_*910del, XM_047417994.1:c.*908_*910del, XM_047417994.1:c.*909_*910del, XM_047417994.1:c.*910del, XM_047417994.1:c.*910dup, XM_047417994.1:c.*909_*910dup, XM_047417994.1:c.*908_*910dup, XM_047417994.1:c.*907_*910dup, XM_047417994.1:c.*906_*910dup, XM_047417995.1:c.*897_*910del, XM_047417995.1:c.*898_*910del, XM_047417995.1:c.*899_*910del, XM_047417995.1:c.*900_*910del, XM_047417995.1:c.*901_*910del, XM_047417995.1:c.*904_*910del, XM_047417995.1:c.*905_*910del, XM_047417995.1:c.*906_*910del, XM_047417995.1:c.*907_*910del, XM_047417995.1:c.*908_*910del, XM_047417995.1:c.*909_*910del, XM_047417995.1:c.*910del, XM_047417995.1:c.*910dup, XM_047417995.1:c.*909_*910dup, XM_047417995.1:c.*908_*910dup, XM_047417995.1:c.*907_*910dup, XM_047417995.1:c.*906_*910dup