SNP Links for Gene (Select 8717) - SNP

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Select item 14913076341.

rs1491307634 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->TTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTT
Chromosome:: no mapping
Canonical SPDI:

Select item 14912836142.

rs1491283614 has merged into rs753824480 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTT>-,T,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 16:67153958 (GRCh38)
16:67187861 (GRCh37)
Canonical SPDI:: NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:67153949:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: TRADD (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTT=0./0 (ALFA)
-=0.000026/7 (TOPMED)
HGVS:: NC_000016.10:g.67153958_67153968del, NC_000016.10:g.67153959_67153968del, NC_000016.10:g.67153962_67153968del, NC_000016.10:g.67153963_67153968del, NC_000016.10:g.67153964_67153968del, NC_000016.10:g.67153965_67153968del, NC_000016.10:g.67153966_67153968del, NC_000016.10:g.67153967_67153968del, NC_000016.10:g.67153968del, NC_000016.10:g.67153968dup, NC_000016.10:g.67153967_67153968dup, NC_000016.10:g.67153966_67153968dup, NC_000016.10:g.67153965_67153968dup, NC_000016.10:g.67153964_67153968dup, NC_000016.10:g.67153963_67153968dup, NC_000016.10:g.67153962_67153968dup, NC_000016.9:g.67187861_67187871del, NC_000016.9:g.67187862_67187871del, NC_000016.9:g.67187865_67187871del, NC_000016.9:g.67187866_67187871del, NC_000016.9:g.67187867_67187871del, NC_000016.9:g.67187868_67187871del, NC_000016.9:g.67187869_67187871del, NC_000016.9:g.67187870_67187871del, NC_000016.9:g.67187871del, NC_000016.9:g.67187871dup, NC_000016.9:g.67187870_67187871dup, NC_000016.9:g.67187869_67187871dup, NC_000016.9:g.67187868_67187871dup, NC_000016.9:g.67187867_67187871dup, NC_000016.9:g.67187866_67187871dup, NC_000016.9:g.67187865_67187871dup

Select item 14910685363.

rs1491068536 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>- [Show Flanks]
Chromosome:: 16:67161451 (GRCh38)
16:67195354 (GRCh37)
Canonical SPDI:: NC_000016.10:67161449:AGA:A
Gene:: TRADD (Varview), FBXL8 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.00413/49 (ALFA)
HGVS:: NC_000016.10:g.67161451_67161452del, NC_000016.9:g.67195354_67195355del, NG_009294.1:g.3067_3068del

Select item 14901405674.

rs1490140567 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:67161095 (GRCh38)
16:67194998 (GRCh37)
Canonical SPDI:: NC_000016.10:67161094:C:T
Gene:: TRADD (Varview), FBXL8 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.67161095C>T, NC_000016.9:g.67194998C>T, NG_009294.1:g.2711C>T

Select item 14900504495.

rs1490050449 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 16:67153867 (GRCh38)
16:67187770 (GRCh37)
Canonical SPDI:: NC_000016.10:67153866:T:G
Gene:: TRADD (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.67153867T>G, NC_000016.9:g.67187770T>G

Select item 14899788996.

rs1489978899 has merged into rs59873315 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 16:67161462 (GRCh38)
16:67195365 (GRCh37)
Canonical SPDI:: NC_000016.10:67161451:AAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000016.10:67161451:AAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000016.10:67161451:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000016.10:67161451:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000016.10:67161451:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000016.10:67161451:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000016.10:67161451:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000016.10:67161451:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000016.10:67161451:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000016.10:67161451:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000016.10:67161451:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: TRADD (Varview), FBXL8 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAA=0./0 (ALFA)
-=0.03925/23 (NorthernSweden)
HGVS:: NC_000016.10:g.67161462_67161467del, NC_000016.10:g.67161463_67161467del, NC_000016.10:g.67161464_67161467del, NC_000016.10:g.67161465_67161467del, NC_000016.10:g.67161466_67161467del, NC_000016.10:g.67161467del, NC_000016.10:g.67161467dup, NC_000016.10:g.67161466_67161467dup, NC_000016.10:g.67161465_67161467dup, NC_000016.10:g.67161454_67161467dup, NC_000016.10:g.67161467_67161468insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000016.9:g.67195365_67195370del, NC_000016.9:g.67195366_67195370del, NC_000016.9:g.67195367_67195370del, NC_000016.9:g.67195368_67195370del, NC_000016.9:g.67195369_67195370del, NC_000016.9:g.67195370del, NC_000016.9:g.67195370dup, NC_000016.9:g.67195369_67195370dup, NC_000016.9:g.67195368_67195370dup, NC_000016.9:g.67195357_67195370dup, NC_000016.9:g.67195370_67195371insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NG_009294.1:g.3078_3083del, NG_009294.1:g.3079_3083del, NG_009294.1:g.3080_3083del, NG_009294.1:g.3081_3083del, NG_009294.1:g.3082_3083del, NG_009294.1:g.3083del, NG_009294.1:g.3083dup, NG_009294.1:g.3082_3083dup, NG_009294.1:g.3081_3083dup, NG_009294.1:g.3070_3083dup, NG_009294.1:g.3083_3084insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Select item 14896795667.

rs1489679566 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 16:67156710 (GRCh38)
16:67190613 (GRCh37)
Canonical SPDI:: NC_000016.10:67156709:C:A
Gene:: TRADD (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.67156710C>A, NC_000016.9:g.67190613C>A

Select item 14895567078.

rs1489556707 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 16:67160047 (GRCh38)
16:67193950 (GRCh37)
Canonical SPDI:: NC_000016.10:67160046:C:A
Gene:: TRADD (Varview), FBXL8 (Varview)
Functional Consequence:: 2KB_upstream_variant,5_prime_UTR_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000016.10:g.67160047C>A, NC_000016.9:g.67193950C>A, NG_009294.1:g.1663C>A, NM_018378.3:c.-61C>A, NM_018378.2:c.-61C>A

Select item 14893757809.

rs1489375780 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:67157939 (GRCh38)
16:67191842 (GRCh37)
Canonical SPDI:: NC_000016.10:67157938:A:G
Gene:: TRADD (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000224/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000223/1 (Estonian)
HGVS:: NC_000016.10:g.67157939A>G, NC_000016.9:g.67191842A>G

Select item 148859978510.

rs1488599785 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 16:67153973 (GRCh38)
16:67187876 (GRCh37)
Canonical SPDI:: NC_000016.10:67153972:C:A
Gene:: TRADD (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency
MAF:: A=0.0016/45 (TOMMO)
HGVS:: NC_000016.10:g.67153973C>A, NC_000016.9:g.67187876C>A

Select item 148786122511.

rs1487861225 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:67161859 (GRCh38)
16:67195762 (GRCh37)
Canonical SPDI:: NC_000016.10:67161858:G:A
Gene:: HSF4 (Varview), TRADD (Varview), FBXL8 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,missense_variant,upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: A=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000016.10:g.67161859G>A, NC_000016.9:g.67195762G>A, NG_009294.1:g.3475G>A, NM_018378.3:c.74G>A, NM_018378.2:c.74G>A, NP_060848.2:p.Arg25His

Select item 148758294812.

rs1487582948 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:67155676 (GRCh38)
16:67189579 (GRCh37)
Canonical SPDI:: NC_000016.10:67155675:C:T
Gene:: TRADD (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000016.10:g.67155676C>T, NC_000016.9:g.67189579C>T, NM_153425.1:c.-51G>A

Select item 148747006513.

rs1487470065 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:67161851 (GRCh38)
16:67195754 (GRCh37)
Canonical SPDI:: NC_000016.10:67161850:G:A
Gene:: HSF4 (Varview), TRADD (Varview), FBXL8 (Varview)
Functional Consequence:: coding_sequence_variant,upstream_transcript_variant,synonymous_variant,2KB_upstream_variant
HGVS:: NC_000016.10:g.67161851G>A, NC_000016.9:g.67195754G>A, NG_009294.1:g.3467G>A, NM_018378.3:c.66G>A, NM_018378.2:c.66G>A

Select item 148739902314.

rs1487399023 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAGTGTT>- [Show Flanks]
Chromosome:: 16:67158026 (GRCh38)
16:67191929 (GRCh37)
Canonical SPDI:: NC_000016.10:67158018:GAGTGTTGAGTGTT:GAGTGTT
Gene:: TRADD (Varview), FBXL8 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: GAGTGTTGAGTGTT=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.67158019GAGTGTT[1], NC_000016.9:g.67191922GAGTGTT[1]

Select item 148723344215.

rs1487233442 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:67160134 (GRCh38)
16:67194037 (GRCh37)
Canonical SPDI:: NC_000016.10:67160133:T:C
Gene:: TRADD (Varview), FBXL8 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.67160134T>C, NC_000016.9:g.67194037T>C, NG_009294.1:g.1750T>C

Select item 148713609716.

rs1487136097 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 16:67159007 (GRCh38)
16:67192910 (GRCh37)
Canonical SPDI:: NC_000016.10:67159006:G:A,NC_000016.10:67159006:G:C
Gene:: TRADD (Varview), FBXL8 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
C=0.000156/1 (1000Genomes)
HGVS:: NC_000016.10:g.67159007G>A, NC_000016.10:g.67159007G>C, NC_000016.9:g.67192910G>A, NC_000016.9:g.67192910G>C, NG_009294.1:g.623G>A, NG_009294.1:g.623G>C

Select item 148704193717.

rs1487041937 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:67156273 (GRCh38)
16:67190176 (GRCh37)
Canonical SPDI:: NC_000016.10:67156272:G:A
Gene:: TRADD (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.67156273G>A, NC_000016.9:g.67190176G>A, NM_153425.1:c.-648C>T

Select item 148648436918.

rs1486484369 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 16:67161168 (GRCh38)
16:67195071 (GRCh37)
Canonical SPDI:: NC_000016.10:67161167:C:A
Gene:: TRADD (Varview), FBXL8 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000016.10:g.67161168C>A, NC_000016.9:g.67195071C>A, NG_009294.1:g.2784C>A

Select item 148640646019.

rs1486406460 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:67155534 (GRCh38)
16:67189437 (GRCh37)
Canonical SPDI:: NC_000016.10:67155533:C:T
Gene:: TRADD (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000016.10:g.67155534C>T, NC_000016.9:g.67189437C>T, NM_003789.4:c.272G>A, NM_003789.3:c.272G>A, NM_001323552.2:c.272G>A, NM_001323552.1:c.272G>A, NM_153425.1:c.92G>A, NP_003780.1:p.Arg91His, NP_001310481.1:p.Arg91His

Select item 148627729420.

rs1486277294 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 16:67158989 (GRCh38)
16:67192892 (GRCh37)
Canonical SPDI:: NC_000016.10:67158988:C:G,NC_000016.10:67158988:C:T
Gene:: TRADD (Varview), FBXL8 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.67158989C>G, NC_000016.10:g.67158989C>T, NC_000016.9:g.67192892C>G, NC_000016.9:g.67192892C>T, NG_009294.1:g.605C>G, NG_009294.1:g.605C>T

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