U.S. flag

An official website of the United States government

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Links from Gene

Items: 1 to 20 of 2143

1.

rs1490506414 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    C>G [Show Flanks]
    Chromosome:
    20:63696844 (GRCh38)
    20:62328197 (GRCh37)
    Canonical SPDI:
    NC_000020.11:63696843:C:G
    Gene:
    TNFRSF6B (Varview), RTEL1-TNFRSF6B (Varview)
    Functional Consequence:
    coding_sequence_variant,missense_variant,non_coding_transcript_variant
    Validated:
    by frequency,by cluster
    MAF:
    G=0.000007/1 (GnomAD)
    HGVS:
    2.

    rs1489149878 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      G>A [Show Flanks]
      Chromosome:
      20:63697012 (GRCh38)
      20:62328365 (GRCh37)
      Canonical SPDI:
      NC_000020.11:63697011:G:A
      Gene:
      TNFRSF6B (Varview), RTEL1-TNFRSF6B (Varview)
      Functional Consequence:
      coding_sequence_variant,stop_gained,non_coding_transcript_variant
      Validated:
      by frequency,by alfa
      MAF:
      A=0.000111/1 (ALFA)
      A=0.000004/1 (GnomAD_exomes)
      HGVS:
      3.

      rs1488824255 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        A>G,T [Show Flanks]
        Chromosome:
        20:63697157 (GRCh38)
        20:62328510 (GRCh37)
        Canonical SPDI:
        NC_000020.11:63697156:A:G,NC_000020.11:63697156:A:T
        Gene:
        TNFRSF6B (Varview), RTEL1-TNFRSF6B (Varview)
        Functional Consequence:
        synonymous_variant,coding_sequence_variant,non_coding_transcript_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        T=0./0 (ALFA)
        T=0.000004/1 (TOPMED)
        G=0.000006/1 (GnomAD_exomes)
        T=0.000007/1 (GnomAD)
        HGVS:
        4.

        rs1488683725 [Homo sapiens]
          Variant type:
          DELINS
          Alleles:
          CAG>- [Show Flanks]
          Chromosome:
          20:63695547 (GRCh38)
          20:62326900 (GRCh37)
          Canonical SPDI:
          NC_000020.11:63695543:CAGCAG:CAG
          Gene:
          TNFRSF6B (Varview), RTEL1 (Varview), RTEL1-TNFRSF6B (Varview)
          Functional Consequence:
          coding_sequence_variant,non_coding_transcript_variant,intron_variant,upstream_transcript_variant,inframe_deletion,2KB_upstream_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          CAGCAG=0./0 (ALFA)
          -=0.000004/1 (TOPMED)
          -=0.000007/1 (GnomAD)
          HGVS:
          5.

          rs1488530271 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            T>C [Show Flanks]
            Chromosome:
            20:63697449 (GRCh38)
            20:62328802 (GRCh37)
            Canonical SPDI:
            NC_000020.11:63697448:T:C
            Gene:
            TNFRSF6B (Varview), RTEL1-TNFRSF6B (Varview)
            Functional Consequence:
            synonymous_variant,coding_sequence_variant,non_coding_transcript_variant
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            C=0./0 (ALFA)
            C=0.000004/1 (TOPMED)
            HGVS:
            6.

            rs1487906619 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              C>T [Show Flanks]
              Chromosome:
              20:63695138 (GRCh38)
              20:62326491 (GRCh37)
              Canonical SPDI:
              NC_000020.11:63695137:C:T
              Gene:
              TNFRSF6B (Varview), RTEL1 (Varview), RTEL1-TNFRSF6B (Varview)
              Functional Consequence:
              missense_variant,coding_sequence_variant,non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
              HGVS:
              7.

              rs1486837589 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                C>G [Show Flanks]
                Chromosome:
                20:63698486 (GRCh38)
                20:62329839 (GRCh37)
                Canonical SPDI:
                NC_000020.11:63698485:C:G
                Gene:
                TNFRSF6B (Varview), ARFRP1 (Varview), RTEL1-TNFRSF6B (Varview)
                Functional Consequence:
                missense_variant,downstream_transcript_variant,coding_sequence_variant,non_coding_transcript_variant,500B_downstream_variant
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                G=0./0 (ALFA)
                G=0.000014/2 (GnomAD)
                G=0.000156/1 (1000Genomes)
                HGVS:
                8.

                rs1484540649 [Homo sapiens]
                  Variant type:
                  DELINS
                  Alleles:
                  ->C [Show Flanks]
                  Chromosome:
                  20:63698972 (GRCh38)
                  20:62330326 (GRCh37)
                  Canonical SPDI:
                  NC_000020.11:63698972:CCCCCC:CCCCCCC
                  Gene:
                  TNFRSF6B (Varview), ARFRP1 (Varview), RTEL1-TNFRSF6B (Varview)
                  Functional Consequence:
                  3_prime_UTR_variant,downstream_transcript_variant,genic_downstream_transcript_variant,non_coding_transcript_variant,500B_downstream_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  CCCCCCC=0.000071/1 (ALFA)
                  C=0.000014/2 (GnomAD)
                  C=0.000034/9 (TOPMED)
                  C=0.000546/1 (Korea1K)
                  C=0.000566/9 (TOMMO)
                  HGVS:
                  NC_000020.11:g.63698978dup, NC_000020.10:g.62330331dup, NG_046961.1:g.7328dup, NM_003224.6:c.*1470dup, NM_003224.5:c.*1470dup, NM_003224.4:c.*1469dup, NM_001134758.4:c.*1625dup, NM_001134758.3:c.*1625dup, NM_001134758.2:c.*1624dup, XM_011528482.4:c.*1470dup, NM_001267549.3:c.*1625dup, NM_001267549.2:c.*1625dup, NM_001267549.1:c.*1624dup, NM_001267544.3:c.*1710dup, NM_001267544.2:c.*1710dup, NM_001267544.1:c.*1709dup, NM_001267547.3:c.*1470dup, NM_001267547.2:c.*1470dup, NM_001267547.1:c.*1469dup, NR_051955.3:n.2190dup, NR_051955.2:n.2227dup, NR_051955.1:n.2226dup, NR_051956.3:n.2187dup, NR_051956.2:n.2224dup, NR_051956.1:n.2223dup, NM_001267545.3:c.*1710dup, NM_001267545.2:c.*1710dup, NM_001267545.1:c.*1709dup, NR_051954.3:n.2185dup, NR_051954.2:n.2222dup, NR_051954.1:n.2221dup, NR_051957.3:n.2182dup, NR_051957.2:n.2219dup, NR_051957.1:n.2218dup, NM_001267548.3:c.*1470dup, NM_001267548.2:c.*1470dup, NM_001267548.1:c.*1469dup, NR_051958.3:n.2116dup, NR_051958.2:n.2153dup, NR_051958.1:n.2152dup, NM_001267546.3:c.*1470dup, NM_001267546.2:c.*1470dup, NM_001267546.1:c.*1469dup, XM_011528483.2:c.*1470dup, XM_047439821.1:c.*1470dup
                  9.

                  rs1483861080 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    A>G [Show Flanks]
                    Chromosome:
                    20:63697639 (GRCh38)
                    20:62328992 (GRCh37)
                    Canonical SPDI:
                    NC_000020.11:63697638:A:G
                    Gene:
                    TNFRSF6B (Varview), RTEL1-TNFRSF6B (Varview)
                    Functional Consequence:
                    intron_variant
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    G=0./0 (ALFA)
                    G=0.000007/1 (GnomAD)
                    G=0.000008/2 (TOPMED)
                    HGVS:
                    10.

                    rs1483820165 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      G>A [Show Flanks]
                      Chromosome:
                      20:63694847 (GRCh38)
                      20:62326200 (GRCh37)
                      Canonical SPDI:
                      NC_000020.11:63694846:G:A
                      Gene:
                      TNFRSF6B (Varview), RTEL1 (Varview), RTEL1-TNFRSF6B (Varview)
                      Functional Consequence:
                      synonymous_variant,coding_sequence_variant,non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
                      Validated:
                      by frequency
                      MAF:
                      A=0.000004/1 (GnomAD_exomes)
                      HGVS:
                      11.
                      12.

                      rs1483491556 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        T>C [Show Flanks]
                        Chromosome:
                        20:63695969 (GRCh38)
                        20:62327322 (GRCh37)
                        Canonical SPDI:
                        NC_000020.11:63695968:T:C
                        Gene:
                        TNFRSF6B (Varview), RTEL1 (Varview), RTEL1-TNFRSF6B (Varview)
                        Functional Consequence:
                        intron_variant,upstream_transcript_variant,2KB_upstream_variant,3_prime_UTR_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        C=0./0 (ALFA)
                        C=0.000011/3 (TOPMED)
                        C=0.000021/3 (GnomAD)
                        HGVS:
                        13.

                        rs1483100142 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          C>T [Show Flanks]
                          Chromosome:
                          20:63699192 (GRCh38)
                          20:62330545 (GRCh37)
                          Canonical SPDI:
                          NC_000020.11:63699191:C:T
                          Gene:
                          ARFRP1 (Varview), RTEL1-TNFRSF6B (Varview)
                          Functional Consequence:
                          3_prime_UTR_variant,downstream_transcript_variant,genic_downstream_transcript_variant,non_coding_transcript_variant,500B_downstream_variant
                          Validated:
                          by frequency,by alfa
                          MAF:
                          T=0./0 (ALFA)
                          T=0.000011/3 (TOPMED)
                          HGVS:
                          NC_000020.11:g.63699192C>T, NC_000020.10:g.62330545C>T, NG_046961.1:g.7542C>T, NM_003224.6:c.*1251G>A, NM_003224.5:c.*1251G>A, NM_003224.4:c.*1250G>A, NM_001134758.4:c.*1406G>A, NM_001134758.3:c.*1406G>A, NM_001134758.2:c.*1405G>A, XM_011528482.4:c.*1251G>A, NM_001267549.3:c.*1406G>A, NM_001267549.2:c.*1406G>A, NM_001267549.1:c.*1405G>A, NM_001267544.3:c.*1491G>A, NM_001267544.2:c.*1491G>A, NM_001267544.1:c.*1490G>A, NM_001267547.3:c.*1251G>A, NM_001267547.2:c.*1251G>A, NM_001267547.1:c.*1250G>A, NR_051955.3:n.1971G>A, NR_051955.2:n.2008G>A, NR_051955.1:n.2007G>A, NR_051956.3:n.1968G>A, NR_051956.2:n.2005G>A, NR_051956.1:n.2004G>A, NM_001267545.3:c.*1491G>A, NM_001267545.2:c.*1491G>A, NM_001267545.1:c.*1490G>A, NR_051954.3:n.1966G>A, NR_051954.2:n.2003G>A, NR_051954.1:n.2002G>A, NR_051957.3:n.1963G>A, NR_051957.2:n.2000G>A, NR_051957.1:n.1999G>A, NM_001267548.3:c.*1251G>A, NM_001267548.2:c.*1251G>A, NM_001267548.1:c.*1250G>A, NR_051958.3:n.1897G>A, NR_051958.2:n.1934G>A, NR_051958.1:n.1933G>A, NM_001267546.3:c.*1251G>A, NM_001267546.2:c.*1251G>A, NM_001267546.1:c.*1250G>A, XM_011528483.2:c.*1251G>A, XM_047439821.1:c.*1251G>A
                          14.

                          rs1482909234 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            C>A [Show Flanks]
                            Chromosome:
                            20:63697353 (GRCh38)
                            20:62328706 (GRCh37)
                            Canonical SPDI:
                            NC_000020.11:63697352:C:A
                            Gene:
                            TNFRSF6B (Varview), RTEL1-TNFRSF6B (Varview)
                            Functional Consequence:
                            coding_sequence_variant,stop_gained,non_coding_transcript_variant
                            Validated:
                            by frequency,by alfa,by cluster
                            MAF:
                            A=0.000094/1 (ALFA)
                            A=0.000004/1 (GnomAD_exomes)
                            A=0.000004/1 (TOPMED)
                            HGVS:
                            15.

                            rs1482636950 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              C>T [Show Flanks]
                              Chromosome:
                              20:63694689 (GRCh38)
                              20:62326042 (GRCh37)
                              Canonical SPDI:
                              NC_000020.11:63694688:C:T
                              Gene:
                              TNFRSF6B (Varview), RTEL1 (Varview), RTEL1-TNFRSF6B (Varview)
                              Functional Consequence:
                              intron_variant,upstream_transcript_variant,2KB_upstream_variant
                              Validated:
                              by frequency,by alfa
                              MAF:
                              T=0./0 (ALFA)
                              HGVS:
                              16.

                              rs1482377789 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                C>G,T [Show Flanks]
                                Chromosome:
                                20:63695183 (GRCh38)
                                20:62326536 (GRCh37)
                                Canonical SPDI:
                                NC_000020.11:63695182:C:G,NC_000020.11:63695182:C:T
                                Gene:
                                TNFRSF6B (Varview), RTEL1 (Varview), RTEL1-TNFRSF6B (Varview)
                                Functional Consequence:
                                missense_variant,coding_sequence_variant,non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
                                Validated:
                                by frequency,by alfa,by cluster
                                MAF:
                                T=0.000043/1 (ALFA)
                                T=0.000007/1 (GnomAD)
                                T=0.000008/2 (GnomAD_exomes)
                                HGVS:
                                NC_000020.11:g.63695183C>G, NC_000020.11:g.63695183C>T, NC_000020.10:g.62326536C>G, NC_000020.10:g.62326536C>T, NG_033901.1:g.42374C>G, NG_033901.1:g.42374C>T, NM_032957.5:c.3533C>G, NM_032957.5:c.3533C>T, NM_032957.4:c.3533C>G, NM_032957.4:c.3533C>T, NM_016434.4:c.3461C>G, NM_016434.4:c.3461C>T, NM_016434.3:c.3461C>G, NM_016434.3:c.3461C>T, NM_001283009.2:c.3461C>G, NM_001283009.2:c.3461C>T, NM_001283009.1:c.3461C>G, NM_001283009.1:c.3461C>T, NM_001283010.1:c.2792C>G, NM_001283010.1:c.2792C>T, NG_046961.1:g.3533C>G, NG_046961.1:g.3533C>T, NM_015647.2:c.1196C>G, NM_015647.2:c.1196C>T, NM_032945.2:c.-277C>G, NM_032945.2:c.-277C>T, NR_037882.1:n.4288C>G, NR_037882.1:n.4288C>T, NM_015647.1:c.1196C>G, NM_015647.1:c.1196C>T, NM_032945.1:c.-277C>G, NM_032945.1:c.-277C>T, NP_116575.3:p.Ala1178Gly, NP_116575.3:p.Ala1178Val, NP_057518.1:p.Ala1154Gly, NP_057518.1:p.Ala1154Val, NP_001269938.1:p.Ala1154Gly, NP_001269938.1:p.Ala1154Val, NP_001269939.1:p.Ala931Gly, NP_001269939.1:p.Ala931Val
                                17.

                                rs1482027480 [Homo sapiens]
                                  Variant type:
                                  SNV
                                  Alleles:
                                  A>C,G [Show Flanks]
                                  Chromosome:
                                  20:63698682 (GRCh38)
                                  20:62330035 (GRCh37)
                                  Canonical SPDI:
                                  NC_000020.11:63698681:A:C,NC_000020.11:63698681:A:G
                                  Gene:
                                  TNFRSF6B (Varview), ARFRP1 (Varview), RTEL1-TNFRSF6B (Varview)
                                  Functional Consequence:
                                  genic_downstream_transcript_variant,non_coding_transcript_variant,3_prime_UTR_variant
                                  Validated:
                                  by frequency,by alfa,by cluster
                                  MAF:
                                  G=0./0 (ALFA)
                                  HGVS:
                                  NC_000020.11:g.63698682A>C, NC_000020.11:g.63698682A>G, NC_000020.10:g.62330035A>C, NC_000020.10:g.62330035A>G, NG_046961.1:g.7032A>C, NG_046961.1:g.7032A>G, NM_003823.4:c.*119A>C, NM_003823.4:c.*119A>G, NM_003823.3:c.*119A>C, NM_003823.3:c.*119A>G, NM_003224.6:c.*1761T>G, NM_003224.6:c.*1761T>C, NM_003224.5:c.*1761T>G, NM_003224.5:c.*1761T>C, NM_003224.4:c.*1760T>G, NM_003224.4:c.*1760T>C, NM_001134758.4:c.*1916T>G, NM_001134758.4:c.*1916T>C, NM_001134758.3:c.*1916T>G, NM_001134758.3:c.*1916T>C, NM_001134758.2:c.*1915T>G, NM_001134758.2:c.*1915T>C, XM_011528482.4:c.*1761T>G, XM_011528482.4:c.*1761T>C, NM_001267549.3:c.*1916T>G, NM_001267549.3:c.*1916T>C, NM_001267549.2:c.*1916T>G, NM_001267549.2:c.*1916T>C, NM_001267549.1:c.*1915T>G, NM_001267549.1:c.*1915T>C, NM_001267544.3:c.*2001T>G, NM_001267544.3:c.*2001T>C, NM_001267544.2:c.*2001T>G, NM_001267544.2:c.*2001T>C, NM_001267544.1:c.*2000T>G, NM_001267544.1:c.*2000T>C, NM_001267547.3:c.*1761T>G, NM_001267547.3:c.*1761T>C, NM_001267547.2:c.*1761T>G, NM_001267547.2:c.*1761T>C, NM_001267547.1:c.*1760T>G, NM_001267547.1:c.*1760T>C, NR_051955.3:n.2481T>G, NR_051955.3:n.2481T>C, NR_051955.2:n.2518T>G, NR_051955.2:n.2518T>C, NR_051955.1:n.2517T>G, NR_051955.1:n.2517T>C, NR_051956.3:n.2478T>G, NR_051956.3:n.2478T>C, NR_051956.2:n.2515T>G, NR_051956.2:n.2515T>C, NR_051956.1:n.2514T>G, NR_051956.1:n.2514T>C, NM_001267545.3:c.*2001T>G, NM_001267545.3:c.*2001T>C, NM_001267545.2:c.*2001T>G, NM_001267545.2:c.*2001T>C, NM_001267545.1:c.*2000T>G, NM_001267545.1:c.*2000T>C, NR_051954.3:n.2476T>G, NR_051954.3:n.2476T>C, NR_051954.2:n.2513T>G, NR_051954.2:n.2513T>C, NR_051954.1:n.2512T>G, NR_051954.1:n.2512T>C, NR_051957.3:n.2473T>G, NR_051957.3:n.2473T>C, NR_051957.2:n.2510T>G, NR_051957.2:n.2510T>C, NR_051957.1:n.2509T>G, NR_051957.1:n.2509T>C, NM_001267548.3:c.*1761T>G, NM_001267548.3:c.*1761T>C, NM_001267548.2:c.*1761T>G, NM_001267548.2:c.*1761T>C, NM_001267548.1:c.*1760T>G, NM_001267548.1:c.*1760T>C, NR_051958.3:n.2407T>G, NR_051958.3:n.2407T>C, NR_051958.2:n.2444T>G, NR_051958.2:n.2444T>C, NR_051958.1:n.2443T>G, NR_051958.1:n.2443T>C, NM_001267546.3:c.*1761T>G, NM_001267546.3:c.*1761T>C, NM_001267546.2:c.*1761T>G, NM_001267546.2:c.*1761T>C, NM_001267546.1:c.*1760T>G, NM_001267546.1:c.*1760T>C, XM_011528483.2:c.*1761T>G, XM_011528483.2:c.*1761T>C, NM_032945.2:c.*119A>C, NM_032945.2:c.*119A>G, NR_037882.1:n.5756A>C, NR_037882.1:n.5756A>G, XM_047439821.1:c.*1761T>G, XM_047439821.1:c.*1761T>C, NM_032945.1:c.*120A>C, NM_032945.1:c.*120A>G
                                  18.

                                  rs1480225518 [Homo sapiens]
                                    Variant type:
                                    SNV
                                    Alleles:
                                    T>C [Show Flanks]
                                    Chromosome:
                                    20:63696808 (GRCh38)
                                    20:62328161 (GRCh37)
                                    Canonical SPDI:
                                    NC_000020.11:63696807:T:C
                                    Gene:
                                    TNFRSF6B (Varview), RTEL1-TNFRSF6B (Varview)
                                    Functional Consequence:
                                    coding_sequence_variant,missense_variant,non_coding_transcript_variant
                                    HGVS:
                                    19.

                                    rs1479951805 [Homo sapiens]
                                      Variant type:
                                      SNV
                                      Alleles:
                                      G>C [Show Flanks]
                                      Chromosome:
                                      20:63695726 (GRCh38)
                                      20:62327079 (GRCh37)
                                      Canonical SPDI:
                                      NC_000020.11:63695725:G:C
                                      Gene:
                                      TNFRSF6B (Varview), RTEL1 (Varview), RTEL1-TNFRSF6B (Varview)
                                      Functional Consequence:
                                      intron_variant,upstream_transcript_variant,2KB_upstream_variant
                                      Validated:
                                      by frequency,by alfa,by cluster
                                      MAF:
                                      C=0./0 (ALFA)
                                      C=0.000004/1 (TOPMED)
                                      C=0.000007/1 (GnomAD)
                                      HGVS:
                                      20.

                                      rs1479921630 [Homo sapiens]
                                        Variant type:
                                        SNV
                                        Alleles:
                                        C>T [Show Flanks]
                                        Chromosome:
                                        20:63695089 (GRCh38)
                                        20:62326442 (GRCh37)
                                        Canonical SPDI:
                                        NC_000020.11:63695088:C:T
                                        Gene:
                                        TNFRSF6B (Varview), RTEL1 (Varview), RTEL1-TNFRSF6B (Varview)
                                        Functional Consequence:
                                        missense_variant,coding_sequence_variant,non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
                                        Validated:
                                        by frequency,by alfa
                                        MAF:
                                        T=0.000071/1 (ALFA)
                                        T=0.000004/1 (TOPMED)
                                        HGVS:

                                        Display Settings:

                                        Format
                                        Items per page
                                        Sort by

                                        Send to:

                                        Choose Destination

                                        Supplemental Content

                                        Find related data

                                        Recent activity

                                        Your browsing activity is empty.

                                        Activity recording is turned off.

                                        Turn recording back on

                                        See more...