SNP Links for Gene (Select 8804) - SNP

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Items: 1 to 20 of 3378

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Select item 14909874771.

rs1490987477 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:167541079 (GRCh38)
1:167510316 (GRCh37)
Canonical SPDI:: NC_000001.11:167541078:A:G
Gene:: CREG1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000001.11:g.167541079A>G, NC_000001.10:g.167510316A>G, NM_003851.3:c.*1219T>C, NM_003851.2:c.*1219T>C

Select item 14908064242.

rs1490806424 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:167549809 (GRCh38)
1:167519046 (GRCh37)
Canonical SPDI:: NC_000001.11:167549808:T:C
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000019/5 (TOPMED)
HGVS:: NC_000001.11:g.167549809T>C, NC_000001.10:g.167519046T>C

Select item 14906895413.

rs1490689541 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:167550965 (GRCh38)
1:167520202 (GRCh37)
Canonical SPDI:: NC_000001.11:167550964:A:C
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.167550965A>C, NC_000001.10:g.167520202A>C

Select item 14905259804.

rs1490525980 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 1:167541954 (GRCh38)
1:167511191 (GRCh37)
Canonical SPDI:: NC_000001.11:167541953:C:G,NC_000001.11:167541953:C:T
Gene:: CREG1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.167541954C>G, NC_000001.11:g.167541954C>T, NC_000001.10:g.167511191C>G, NC_000001.10:g.167511191C>T, NM_003851.3:c.*344G>C, NM_003851.3:c.*344G>A, NM_003851.2:c.*344G>C, NM_003851.2:c.*344G>A

Select item 14903381185.

rs1490338118 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:167551572 (GRCh38)
1:167520809 (GRCh37)
Canonical SPDI:: NC_000001.11:167551571:G:A
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.167551572G>A, NC_000001.10:g.167520809G>A

Select item 14903120706.

rs1490312070 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 1:167550284 (GRCh38)
1:167519521 (GRCh37)
Canonical SPDI:: NC_000001.11:167550283:C:G,NC_000001.11:167550283:C:T
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000685/2 (KOREAN)
T=0.001638/3 (Korea1K)
HGVS:: NC_000001.11:g.167550284C>G, NC_000001.11:g.167550284C>T, NC_000001.10:g.167519521C>G, NC_000001.10:g.167519521C>T

Select item 14900865147.

rs1490086514 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 1:167543371 (GRCh38)
1:167512608 (GRCh37)
Canonical SPDI:: NC_000001.11:167543370:C:A,NC_000001.11:167543370:C:G,NC_000001.11:167543370:C:T
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000001.11:g.167543371C>A, NC_000001.11:g.167543371C>G, NC_000001.11:g.167543371C>T, NC_000001.10:g.167512608C>A, NC_000001.10:g.167512608C>G, NC_000001.10:g.167512608C>T

Select item 14898434178.

rs1489843417 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:167553452 (GRCh38)
1:167522689 (GRCh37)
Canonical SPDI:: NC_000001.11:167553451:C:A
Gene:: CREG1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
HGVS:: NC_000001.11:g.167553452C>A, NC_000001.10:g.167522689C>A, NM_003851.3:c.290G>T, NM_003851.2:c.290G>T, NP_003842.1:p.Gly97Val

Select item 14894288299.

rs1489428829 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:167543747 (GRCh38)
1:167512984 (GRCh37)
Canonical SPDI:: NC_000001.11:167543746:G:A
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.167543747G>A, NC_000001.10:g.167512984G>A

Select item 148927524510.

rs1489275245 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:167553147 (GRCh38)
1:167522384 (GRCh37)
Canonical SPDI:: NC_000001.11:167553146:G:A
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.167553147G>A, NC_000001.10:g.167522384G>A

Select item 148912890611.

rs1489128906 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:167540763 (GRCh38)
1:167510000 (GRCh37)
Canonical SPDI:: NC_000001.11:167540762:A:G
Gene:: CREG1 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.167540763A>G, NC_000001.10:g.167510000A>G

Select item 148904670712.

rs1489046707 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:167547947 (GRCh38)
1:167517184 (GRCh37)
Canonical SPDI:: NC_000001.11:167547946:T:C
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.167547947T>C, NC_000001.10:g.167517184T>C

Select item 148872432013.

rs1488724320 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 1:167549020 (GRCh38)
1:167518257 (GRCh37)
Canonical SPDI:: NC_000001.11:167549019:A:C,NC_000001.11:167549019:A:G
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000066/1 (ALFA)
G=0.000004/1 (TOPMED)
C=0.000223/1 (Estonian)
HGVS:: NC_000001.11:g.167549020A>C, NC_000001.11:g.167549020A>G, NC_000001.10:g.167518257A>C, NC_000001.10:g.167518257A>G

Select item 148870380814.

rs1488703808 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTCT>- [Show Flanks]
Chromosome:: 1:167545008 (GRCh38)
1:167514245 (GRCh37)
Canonical SPDI:: NC_000001.11:167545005:CTTTCT:CT
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CT=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.167545008_167545011del, NC_000001.10:g.167514245_167514248del

Select item 148869283915.

rs1488692839 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:167554819 (GRCh38)
1:167524056 (GRCh37)
Canonical SPDI:: NC_000001.11:167554818:T:C
Gene:: CREG1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000021/3 (GnomAD)
C=0.000045/12 (TOPMED)
C=0.000319/5 (TOMMO)
C=0.000684/2 (KOREAN)
HGVS:: NC_000001.11:g.167554819T>C, NC_000001.10:g.167524056T>C

Select item 148865224916.

rs1488652249 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CCTCAAA [Show Flanks]
Chromosome:: 1:167543874 (GRCh38)
1:167513112 (GRCh37)
Canonical SPDI:: NC_000001.11:167543874:AACCTCAAA:AACCTCAAACCTCAAA
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AACCTCAAACCTCAAA=0./0 (ALFA)
AACCTCA=0.000011/3 (TOPMED)
AACCTCA=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.167543877_167543883dup, NC_000001.10:g.167513114_167513120dup

Select item 148860764317.

rs1488607643 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:167553347 (GRCh38)
1:167522584 (GRCh37)
Canonical SPDI:: NC_000001.11:167553346:C:A
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.167553347C>A, NC_000001.10:g.167522584C>A

Select item 148857867118.

rs1488578671 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:167548205 (GRCh38)
1:167517442 (GRCh37)
Canonical SPDI:: NC_000001.11:167548204:C:G
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.167548205C>G, NC_000001.10:g.167517442C>G

Select item 148846801919.

rs1488468019 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:167546619 (GRCh38)
1:167515856 (GRCh37)
Canonical SPDI:: NC_000001.11:167546618:A:G
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.167546619A>G, NC_000001.10:g.167515856A>G

Select item 148844666120.

rs1488446661 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:167544211 (GRCh38)
1:167513448 (GRCh37)
Canonical SPDI:: NC_000001.11:167544210:C:T
Gene:: CREG1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.167544211C>T, NC_000001.10:g.167513448C>T

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