SNP Links for Gene (Select 9013) - SNP

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Select item 14909687701.

rs1490968770 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:84182072 (GRCh38)
16:84215678 (GRCh37)
Canonical SPDI:: NC_000016.10:84182071:T:C
Gene:: TAF1C (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000016.10:g.84182072T>C, NC_000016.9:g.84215678T>C

Select item 14907484192.

rs1490748419 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 16:84180809 (GRCh38)
16:84214415 (GRCh37)
Canonical SPDI:: NC_000016.10:84180808:C:G
Gene:: TAF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000016.10:g.84180809C>G, NC_000016.9:g.84214415C>G

Select item 14906922733.

rs1490692273 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:84179242 (GRCh38)
16:84212848 (GRCh37)
Canonical SPDI:: NC_000016.10:84179241:T:C
Gene:: TAF1C (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000005/1 (GnomAD_exomes)
C=0.000008/2 (TOPMED)
HGVS:: NC_000016.10:g.84179242T>C, NC_000016.9:g.84212848T>C, NG_021174.2:g.38936T>C, NG_021174.1:g.38984T>C, XM_006721325.4:c.2312A>G, XM_006721325.3:c.2312A>G, XM_006721325.2:c.2312A>G, XM_006721325.1:c.2312A>G, NM_005679.4:c.2309A>G, NM_005679.3:c.2309A>G, XM_006721326.4:c.2234A>G, XM_006721326.3:c.2234A>G, XM_006721326.2:c.2234A>G, XM_006721326.1:c.2234A>G, XM_005256226.4:c.2309A>G, XM_005256226.3:c.2309A>G, XM_005256226.2:c.2309A>G, XM_005256226.1:c.2309A>G, XM_005256227.4:c.2108A>G, XM_005256227.3:c.2108A>G, XM_005256227.2:c.2108A>G, XM_005256227.1:c.2108A>G, NM_139353.3:c.2027A>G, NM_139353.2:c.2027A>G, NM_001243156.2:c.2231A>G, NM_001243156.1:c.2231A>G, NM_001243159.2:c.1082A>G, NM_001243159.1:c.1082A>G, XM_017023845.2:c.2231A>G, XM_017023845.1:c.2231A>G, XM_017023847.2:c.2030A>G, XM_017023847.1:c.2030A>G, NM_001243160.2:c.878A>G, NM_001243160.1:c.878A>G, NM_001243157.2:c.1313A>G, NM_001243157.1:c.1313A>G, NM_001243158.2:c.1313A>G, NM_001243158.1:c.1313A>G, XP_006721388.1:p.Glu771Gly, NP_005670.4:p.Glu770Gly, XP_006721389.1:p.Glu745Gly, XP_005256283.1:p.Glu770Gly, XP_005256284.1:p.Glu703Gly, NP_647610.3:p.Glu676Gly, NP_001230085.2:p.Glu744Gly, NP_001230088.1:p.Glu361Gly, XP_016879334.1:p.Glu744Gly, XP_016879336.1:p.Glu677Gly, NP_001230089.1:p.Glu293Gly, NP_001230086.1:p.Glu438Gly, NP_001230087.1:p.Glu438Gly

Select item 14905916124.

rs1490591612 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:84185247 (GRCh38)
16:84218853 (GRCh37)
Canonical SPDI:: NC_000016.10:84185246:C:T
Gene:: TAF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000016.10:g.84185247C>T, NC_000016.9:g.84218853C>T

Select item 14905202135.

rs1490520213 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:84186781 (GRCh38)
16:84220387 (GRCh37)
Canonical SPDI:: NC_000016.10:84186780:T:C
Gene:: TAF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0./0 (KOREAN)
C=0.00005/7 (GnomAD)
C=0.00006/16 (TOPMED)
T=0.5/2 (SGDP_PRJ)
HGVS:: NC_000016.10:g.84186781T>C, NC_000016.9:g.84220387T>C

Select item 14903136446.

rs1490313644 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:84182173 (GRCh38)
16:84215779 (GRCh37)
Canonical SPDI:: NC_000016.10:84182172:G:A
Gene:: TAF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.84182173G>A, NC_000016.9:g.84215779G>A

Select item 14902984027.

rs1490298402 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:84183293 (GRCh38)
16:84216899 (GRCh37)
Canonical SPDI:: NC_000016.10:84183292:G:A
Gene:: TAF1C (Varview)
Functional Consequence:: coding_sequence_variant,5_prime_UTR_variant,intron_variant,missense_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.84183293G>A, NC_000016.9:g.84216899G>A, XM_006721325.4:c.362C>T, XM_006721325.3:c.362C>T, XM_006721325.2:c.362C>T, XM_006721325.1:c.362C>T, NM_005679.4:c.359C>T, NM_005679.3:c.359C>T, XM_006721326.4:c.362C>T, XM_006721326.3:c.362C>T, XM_006721326.2:c.362C>T, XM_006721326.1:c.362C>T, XM_005256226.4:c.359C>T, XM_005256226.3:c.359C>T, XM_005256226.2:c.359C>T, XM_005256226.1:c.359C>T, XM_005256227.4:c.158C>T, XM_005256227.3:c.158C>T, XM_005256227.2:c.158C>T, XM_005256227.1:c.158C>T, NM_139353.3:c.158C>T, NM_139353.2:c.158C>T, NM_001243156.2:c.359C>T, NM_001243156.1:c.359C>T, NM_001243159.2:c.-919C>T, NM_001243159.1:c.-919C>T, XM_017023845.2:c.359C>T, XM_017023845.1:c.359C>T, XM_017023847.2:c.158C>T, XM_017023847.1:c.158C>T, NM_001243160.2:c.-1104C>T, NM_001243160.1:c.-1104C>T, NM_001243157.2:c.-486C>T, NM_001243157.1:c.-486C>T, XP_006721388.1:p.Ala121Val, NP_005670.4:p.Ala120Val, XP_006721389.1:p.Ala121Val, XP_005256283.1:p.Ala120Val, XP_005256284.1:p.Ala53Val, NP_647610.3:p.Ala53Val, NP_001230085.2:p.Ala120Val, XP_016879334.1:p.Ala120Val, XP_016879336.1:p.Ala53Val

Select item 14901023658.

rs1490102365 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 16:84184348 (GRCh38)
16:84217954 (GRCh37)
Canonical SPDI:: NC_000016.10:84184347:T:C,NC_000016.10:84184347:T:G
Gene:: TAF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000023/6 (TOPMED)
HGVS:: NC_000016.10:g.84184348T>C, NC_000016.10:g.84184348T>G, NC_000016.9:g.84217954T>C, NC_000016.9:g.84217954T>G

Select item 14900287399.

rs1490028739 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:84185983 (GRCh38)
16:84219589 (GRCh37)
Canonical SPDI:: NC_000016.10:84185982:A:G
Gene:: TAF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: G=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.84185983A>G, NC_000016.9:g.84219589A>G

Select item 148983560810.

rs1489835608 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:84182429 (GRCh38)
16:84216035 (GRCh37)
Canonical SPDI:: NC_000016.10:84182428:G:A
Gene:: TAF1C (Varview)
Functional Consequence:: coding_sequence_variant,5_prime_UTR_variant,missense_variant
HGVS:: NC_000016.10:g.84182429G>A, NC_000016.9:g.84216035G>A, XM_006721325.4:c.497C>T, XM_006721325.3:c.497C>T, XM_006721325.2:c.497C>T, XM_006721325.1:c.497C>T, NM_005679.4:c.494C>T, NM_005679.3:c.494C>T, XM_006721326.4:c.497C>T, XM_006721326.3:c.497C>T, XM_006721326.2:c.497C>T, XM_006721326.1:c.497C>T, XM_005256226.4:c.494C>T, XM_005256226.3:c.494C>T, XM_005256226.2:c.494C>T, XM_005256226.1:c.494C>T, XM_005256227.4:c.293C>T, XM_005256227.3:c.293C>T, XM_005256227.2:c.293C>T, XM_005256227.1:c.293C>T, NM_139353.3:c.293C>T, NM_139353.2:c.293C>T, NM_001243156.2:c.494C>T, NM_001243156.1:c.494C>T, NM_001243159.2:c.-784C>T, NM_001243159.1:c.-784C>T, XM_017023845.2:c.494C>T, XM_017023845.1:c.494C>T, XM_017023847.2:c.293C>T, XM_017023847.1:c.293C>T, NM_001243160.2:c.-969C>T, NM_001243160.1:c.-969C>T, NM_001243157.2:c.-425C>T, NM_001243157.1:c.-425C>T, NM_001243158.2:c.-425C>T, NM_001243158.1:c.-425C>T, XP_006721388.1:p.Ala166Val, NP_005670.4:p.Ala165Val, XP_006721389.1:p.Ala166Val, XP_005256283.1:p.Ala165Val, XP_005256284.1:p.Ala98Val, NP_647610.3:p.Ala98Val, NP_001230085.2:p.Ala165Val, XP_016879334.1:p.Ala165Val, XP_016879336.1:p.Ala98Val

Select item 148973221311.

rs1489732213 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:84181382 (GRCh38)
16:84214988 (GRCh37)
Canonical SPDI:: NC_000016.10:84181381:G:A
Gene:: TAF1C (Varview)
Functional Consequence:: coding_sequence_variant,5_prime_UTR_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.84181382G>A, NC_000016.9:g.84214988G>A, XM_006721325.4:c.1191C>T, XM_006721325.3:c.1191C>T, XM_006721325.2:c.1191C>T, XM_006721325.1:c.1191C>T, NM_005679.4:c.1188C>T, NM_005679.3:c.1188C>T, XM_006721326.4:c.1113C>T, XM_006721326.3:c.1113C>T, XM_006721326.2:c.1113C>T, XM_006721326.1:c.1113C>T, XM_005256226.4:c.1188C>T, XM_005256226.3:c.1188C>T, XM_005256226.2:c.1188C>T, XM_005256226.1:c.1188C>T, XM_005256227.4:c.987C>T, XM_005256227.3:c.987C>T, XM_005256227.2:c.987C>T, XM_005256227.1:c.987C>T, NM_139353.3:c.909C>T, NM_139353.2:c.909C>T, NM_001243156.2:c.1110C>T, NM_001243156.1:c.1110C>T, NM_001243159.2:c.-40C>T, NM_001243159.1:c.-40C>T, XM_017023845.2:c.1110C>T, XM_017023845.1:c.1110C>T, XM_017023847.2:c.909C>T, XM_017023847.1:c.909C>T, NM_001243160.2:c.-225C>T, NM_001243160.1:c.-225C>T, NM_001243157.2:c.192C>T, NM_001243157.1:c.192C>T, NM_001243158.2:c.192C>T, NM_001243158.1:c.192C>T

Select item 148968678212.

rs1489686782 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:84185271 (GRCh38)
16:84218877 (GRCh37)
Canonical SPDI:: NC_000016.10:84185270:C:T
Gene:: TAF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.84185271C>T, NC_000016.9:g.84218877C>T

Select item 148963630113.

rs1489636301 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:84184198 (GRCh38)
16:84217804 (GRCh37)
Canonical SPDI:: NC_000016.10:84184197:A:G
Gene:: TAF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.84184198A>G, NC_000016.9:g.84217804A>G

Select item 148956603414.

rs1489566034 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 16:84178484 (GRCh38)
16:84212090 (GRCh37)
Canonical SPDI:: NC_000016.10:84178483:A:T
Gene:: TAF1C (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000016.10:g.84178484A>T, NC_000016.9:g.84212090A>T, NG_021174.2:g.38178A>T, NG_021174.1:g.38226A>T, XM_006721325.4:c.*457T>A, XM_006721325.3:c.*457T>A, XM_006721325.2:c.*457T>A, XM_006721325.1:c.*457T>A, NM_005679.4:c.*457T>A, NM_005679.3:c.*457T>A, XM_006721326.4:c.*457T>A, XM_006721326.3:c.*457T>A, XM_006721326.2:c.*457T>A, XM_006721326.1:c.*457T>A, XM_005256226.4:c.*457T>A, XM_005256226.3:c.*457T>A, XM_005256226.2:c.*457T>A, XM_005256226.1:c.*457T>A, XM_005256227.4:c.*457T>A, XM_005256227.3:c.*457T>A, XM_005256227.2:c.*457T>A, XM_005256227.1:c.*457T>A, NM_139353.3:c.*457T>A, NM_139353.2:c.*457T>A, NM_001243156.2:c.*457T>A, NM_001243156.1:c.*457T>A, NM_001243159.2:c.*457T>A, NM_001243159.1:c.*457T>A, XM_017023845.2:c.*457T>A, XM_017023845.1:c.*457T>A, XM_017023847.2:c.*457T>A, XM_017023847.1:c.*457T>A, NM_001243160.2:c.*457T>A, NM_001243160.1:c.*457T>A, NM_001243157.2:c.*457T>A, NM_001243157.1:c.*457T>A, NM_001243158.2:c.*457T>A, NM_001243158.1:c.*457T>A

Select item 148943098415.

rs1489430984 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:84182093 (GRCh38)
16:84215699 (GRCh37)
Canonical SPDI:: NC_000016.10:84182092:T:C
Gene:: TAF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.84182093T>C, NC_000016.9:g.84215699T>C

Select item 148942624216.

rs1489426242 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 16:84183616 (GRCh38)
16:84217222 (GRCh37)
Canonical SPDI:: NC_000016.10:84183615:A:T
Gene:: TAF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000016.10:g.84183616A>T, NC_000016.9:g.84217222A>T

Select item 148932196717.

rs1489321967 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:84180012 (GRCh38)
16:84213618 (GRCh37)
Canonical SPDI:: NC_000016.10:84180011:C:T
Gene:: TAF1C (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000016.10:g.84180012C>T, NC_000016.9:g.84213618C>T, XM_006721325.4:c.1636G>A, XM_006721325.3:c.1636G>A, XM_006721325.2:c.1636G>A, XM_006721325.1:c.1636G>A, NM_005679.4:c.1633G>A, NM_005679.3:c.1633G>A, XM_006721326.4:c.1558G>A, XM_006721326.3:c.1558G>A, XM_006721326.2:c.1558G>A, XM_006721326.1:c.1558G>A, XM_005256226.4:c.1633G>A, XM_005256226.3:c.1633G>A, XM_005256226.2:c.1633G>A, XM_005256226.1:c.1633G>A, XM_005256227.4:c.1432G>A, XM_005256227.3:c.1432G>A, XM_005256227.2:c.1432G>A, XM_005256227.1:c.1432G>A, NM_139353.3:c.1351G>A, NM_139353.2:c.1351G>A, NM_001243156.2:c.1555G>A, NM_001243156.1:c.1555G>A, NM_001243159.2:c.406G>A, NM_001243159.1:c.406G>A, XM_017023845.2:c.1555G>A, XM_017023845.1:c.1555G>A, XM_017023847.2:c.1354G>A, XM_017023847.1:c.1354G>A, NM_001243160.2:c.202G>A, NM_001243160.1:c.202G>A, NM_001243157.2:c.637G>A, NM_001243157.1:c.637G>A, NM_001243158.2:c.637G>A, NM_001243158.1:c.637G>A, XP_006721388.1:p.Ala546Thr, NP_005670.4:p.Ala545Thr, XP_006721389.1:p.Ala520Thr, XP_005256283.1:p.Ala545Thr, XP_005256284.1:p.Ala478Thr, NP_647610.3:p.Ala451Thr, NP_001230085.2:p.Ala519Thr, NP_001230088.1:p.Ala136Thr, XP_016879334.1:p.Ala519Thr, XP_016879336.1:p.Ala452Thr, NP_001230089.1:p.Ala68Thr, NP_001230086.1:p.Ala213Thr, NP_001230087.1:p.Ala213Thr

Select item 148928405818.

rs1489284058 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 16:84185274 (GRCh38)
16:84218880 (GRCh37)
Canonical SPDI:: NC_000016.10:84185273:C:A
Gene:: TAF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000224/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000223/1 (Estonian)
HGVS:: NC_000016.10:g.84185274C>A, NC_000016.9:g.84218880C>A

Select item 148916716719.

rs1489167167 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:84182468 (GRCh38)
16:84216074 (GRCh37)
Canonical SPDI:: NC_000016.10:84182467:C:T
Gene:: TAF1C (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000016.10:g.84182468C>T, NC_000016.9:g.84216074C>T

Select item 148896017120.

rs1488960171 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:84187790 (GRCh38)
16:84221396 (GRCh37)
Canonical SPDI:: NC_000016.10:84187789:A:G
Gene:: TAF1C (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.84187790A>G, NC_000016.9:g.84221396A>G

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