SNP Links for Gene (Select 9133) - SNP

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Select item 14915154631.

rs1491515463 has merged into rs1168762299 [Homo sapiens]

Variant type:: DELINS
Alleles:: GG>-,G,GGG,GGGG,GGGGG,GGGGGG [Show Flanks]
Chromosome:: 15:59123691 (GRCh38)
15:59415890 (GRCh37)
Canonical SPDI:: NC_000015.10:59123689:GGG:G,NC_000015.10:59123689:GGG:GG,NC_000015.10:59123689:GGG:GGGG,NC_000015.10:59123689:GGG:GGGGG,NC_000015.10:59123689:GGG:GGGGGG,NC_000015.10:59123689:GGG:GGGGGGG
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000015.10:g.59123691_59123692del, NC_000015.10:g.59123692del, NC_000015.10:g.59123692dup, NC_000015.10:g.59123691_59123692dup, NC_000015.10:g.59123690_59123692dup, NC_000015.10:g.59123692_59123693insGGGG, NC_000015.9:g.59415890_59415891del, NC_000015.9:g.59415891del, NC_000015.9:g.59415891dup, NC_000015.9:g.59415890_59415891dup, NC_000015.9:g.59415889_59415891dup, NC_000015.9:g.59415891_59415892insGGGG

Select item 14913219792.

rs1491321979 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TGG,TGGG,TGGGG,TGGGGG [Show Flanks]
Chromosome:: 15:59123689 (GRCh38)
15:59415889 (GRCh37)
Canonical SPDI:: NC_000015.10:59123689:G:GTGG,NC_000015.10:59123689:G:GTGGG,NC_000015.10:59123689:G:GTGGGG,NC_000015.10:59123689:G:GTGGGGG
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GTGGG=0./0 (ALFA)
HGVS:: NC_000015.10:g.59123690_59123691insTGG, NC_000015.10:g.59123690_59123691insTGGG, NC_000015.10:g.59123690_59123691insTGGGG, NC_000015.10:g.59123690_59123691insTGGGGG, NC_000015.9:g.59415889_59415890insTGG, NC_000015.9:g.59415889_59415890insTGGG, NC_000015.9:g.59415889_59415890insTGGGG, NC_000015.9:g.59415889_59415890insTGGGGG

Select item 14912566413.

rs1491256641 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 15:59122536 (GRCh38)
15:59414736 (GRCh37)
Canonical SPDI:: NC_000015.10:59122536:C:CC
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
C=0.000105/14 (GnomAD)
HGVS:: NC_000015.10:g.59122537dup, NC_000015.9:g.59414736dup

Select item 14912095294.

rs1491209529 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 15:59122537 (GRCh38)
15:59414736 (GRCh37)
Canonical SPDI:: NC_000015.10:59122535:TCT:T
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000015.10:g.59122537_59122538del, NC_000015.9:g.59414736_59414737del

Select item 14912052855.

rs1491205285 has merged into rs11327656 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTT>-,T,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 15:59111866 (GRCh38)
15:59404065 (GRCh37)
Canonical SPDI:: NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000015.10:59111856:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTT=0./0 (ALFA)
-=0.000038/10 (TOPMED)
-=0.222045/1112 (1000Genomes)
HGVS:: NC_000015.10:g.59111866_59111873del, NC_000015.10:g.59111867_59111873del, NC_000015.10:g.59111870_59111873del, NC_000015.10:g.59111871_59111873del, NC_000015.10:g.59111872_59111873del, NC_000015.10:g.59111873del, NC_000015.10:g.59111873dup, NC_000015.10:g.59111872_59111873dup, NC_000015.10:g.59111871_59111873dup, NC_000015.10:g.59111870_59111873dup, NC_000015.10:g.59111869_59111873dup, NC_000015.10:g.59111868_59111873dup, NC_000015.10:g.59111867_59111873dup, NC_000015.10:g.59111866_59111873dup, NC_000015.10:g.59111865_59111873dup, NC_000015.10:g.59111864_59111873dup, NC_000015.10:g.59111863_59111873dup, NC_000015.10:g.59111862_59111873dup, NC_000015.10:g.59111857_59111873dup, NC_000015.10:g.59111873_59111874insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000015.9:g.59404065_59404072del, NC_000015.9:g.59404066_59404072del, NC_000015.9:g.59404069_59404072del, NC_000015.9:g.59404070_59404072del, NC_000015.9:g.59404071_59404072del, NC_000015.9:g.59404072del, NC_000015.9:g.59404072dup, NC_000015.9:g.59404071_59404072dup, NC_000015.9:g.59404070_59404072dup, NC_000015.9:g.59404069_59404072dup, NC_000015.9:g.59404068_59404072dup, NC_000015.9:g.59404067_59404072dup, NC_000015.9:g.59404066_59404072dup, NC_000015.9:g.59404065_59404072dup, NC_000015.9:g.59404064_59404072dup, NC_000015.9:g.59404063_59404072dup, NC_000015.9:g.59404062_59404072dup, NC_000015.9:g.59404061_59404072dup, NC_000015.9:g.59404056_59404072dup, NC_000015.9:g.59404072_59404073insTTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 14910441366.

rs1491044136 [Homo sapiens]

Variant type:: DEL
Alleles:: TC>- [Show Flanks]
Chromosome:: 15:59107318 (GRCh38)
15:59399517 (GRCh37)
Canonical SPDI:: NC_000015.10:59107317:TC:
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000015.10:g.59107318_59107319del, NC_000015.9:g.59399517_59399518del

Select item 14908970867.

rs1490897086 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:59121563 (GRCh38)
15:59413762 (GRCh37)
Canonical SPDI:: NC_000015.10:59121562:G:A
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.59121563G>A, NC_000015.9:g.59413762G>A

Select item 14908433828.

rs1490843382 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:59105717 (GRCh38)
15:59397916 (GRCh37)
Canonical SPDI:: NC_000015.10:59105716:C:G
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.59105717C>G, NC_000015.9:g.59397916C>G

Select item 14906502539.

rs1490650253 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 15:59105420 (GRCh38)
15:59397619 (GRCh37)
Canonical SPDI:: NC_000015.10:59105419:T:G
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.59105420T>G, NC_000015.9:g.59397619T>G

Select item 149046894610.

rs1490468946 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:59125300 (GRCh38)
15:59417499 (GRCh37)
Canonical SPDI:: NC_000015.10:59125299:C:G
Gene:: CCNB2 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000015/4 (TOPMED)
HGVS:: NC_000015.10:g.59125300C>G, NC_000015.9:g.59417499C>G

Select item 149038013211.

rs1490380132 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:59116545 (GRCh38)
15:59408744 (GRCh37)
Canonical SPDI:: NC_000015.10:59116544:A:G
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000015.10:g.59116545A>G, NC_000015.9:g.59408744A>G

Select item 149035505412.

rs1490355054 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 15:59118807 (GRCh38)
15:59411006 (GRCh37)
Canonical SPDI:: NC_000015.10:59118806:G:A,NC_000015.10:59118806:G:T
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.59118807G>A, NC_000015.10:g.59118807G>T, NC_000015.9:g.59411006G>A, NC_000015.9:g.59411006G>T

Select item 149032122113.

rs1490321221 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 15:59104865 (GRCh38)
15:59397064 (GRCh37)
Canonical SPDI:: NC_000015.10:59104864:C:A,NC_000015.10:59104864:C:G,NC_000015.10:59104864:C:T
Gene:: CCNB2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
T=0.000007/1 (GnomAD)
A=0.000035/1 (TOMMO)
HGVS:: NC_000015.10:g.59104865C>A, NC_000015.10:g.59104865C>G, NC_000015.10:g.59104865C>T, NC_000015.9:g.59397064C>A, NC_000015.9:g.59397064C>G, NC_000015.9:g.59397064C>T

Select item 149023179114.

rs1490231791 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 15:59116932 (GRCh38)
15:59409131 (GRCh37)
Canonical SPDI:: NC_000015.10:59116931:T:G
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.59116932T>G, NC_000015.9:g.59409131T>G

Select item 149019297815.

rs1490192978 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:59125322 (GRCh38)
15:59417521 (GRCh37)
Canonical SPDI:: NC_000015.10:59125321:G:A
Gene:: CCNB2 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.59125322G>A, NC_000015.9:g.59417521G>A

Select item 149016955016.

rs1490169550 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:59111644 (GRCh38)
15:59403843 (GRCh37)
Canonical SPDI:: NC_000015.10:59111643:C:T
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.59111644C>T, NC_000015.9:g.59403843C>T

Select item 149014104717.

rs1490141047 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:59124519 (GRCh38)
15:59416718 (GRCh37)
Canonical SPDI:: NC_000015.10:59124518:C:G
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000015.10:g.59124519C>G, NC_000015.9:g.59416718C>G

Select item 148995077818.

rs1489950778 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 15:59112798 (GRCh38)
15:59404997 (GRCh37)
Canonical SPDI:: NC_000015.10:59112797:G:A,NC_000015.10:59112797:G:T
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.00003/8 (TOPMED)
HGVS:: NC_000015.10:g.59112798G>A, NC_000015.10:g.59112798G>T, NC_000015.9:g.59404997G>A, NC_000015.9:g.59404997G>T

Select item 148989035019.

rs1489890350 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:59115770 (GRCh38)
15:59407969 (GRCh37)
Canonical SPDI:: NC_000015.10:59115769:G:A
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.59115770G>A, NC_000015.9:g.59407969G>A

Select item 148982815220.

rs1489828152 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:59119624 (GRCh38)
15:59411823 (GRCh37)
Canonical SPDI:: NC_000015.10:59119623:G:A
Gene:: CCNB2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.59119624G>A, NC_000015.9:g.59411823G>A

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