SNP Links for Gene (Select 93145) - SNP

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Items: 1 to 20 of 20105

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Select item 14915749971.

rs1491574997 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 19:9904151 (GRCh38)
19:10014828 (GRCh37)
Canonical SPDI:: NC_000019.10:9904151::G
Gene:: OLFM2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.000391/48 (GnomAD)
G=0.000602/10 (TOMMO)
G=0.002183/4 (Korea1K)
HGVS:: NC_000019.10:g.9904151_9904152insG, NC_000019.9:g.10014827_10014828insG

Select item 14915704642.

rs1491570464 [Homo sapiens]

Variant type:: INS
Alleles:: ->A [Show Flanks]
Chromosome:: 19:9860476 (GRCh38)
19:9971153 (GRCh37)
Canonical SPDI:: NC_000019.10:9860476::A
Gene:: OLFM2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.00032/24 (GnomAD)
HGVS:: NC_000019.10:g.9860476_9860477insA, NC_000019.9:g.9971152_9971153insA

Select item 14915413843.

rs1491541384 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: 19:9919789 (GRCh38)
19:10030465 (GRCh37)
Canonical SPDI:: NC_000019.10:9919788:AT:
Gene:: OLFM2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000019.10:g.9919789_9919790del, NC_000019.9:g.10030465_10030466del

Select item 14915136894.

rs1491513689 [Homo sapiens]

Variant type:: DEL
Alleles:: TA>- [Show Flanks]
Chromosome:: 19:9884276 (GRCh38)
19:9994952 (GRCh37)
Canonical SPDI:: NC_000019.10:9884275:TA:
Gene:: OLFM2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0.00008/1 (ALFA)
-=0.0013/12 (GnomAD)
HGVS:: NC_000019.10:g.9884276_9884277del, NC_000019.9:g.9994952_9994953del

Select item 14915084525.

rs1491508452 has merged into rs34756498 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTTT,TTTTTTTT [Show Flanks]
Chromosome:: 19:9915250 (GRCh38)
19:10025926 (GRCh37)
Canonical SPDI:: NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT
Gene:: OLFM2 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTT=0./0 (ALFA)
-=0.2935/172 (NorthernSweden)
-=0.4/16 (GENOME_DK)
TT=0.4986/2497 (1000Genomes)
HGVS:: NC_000019.10:g.9915250_9915255del, NC_000019.10:g.9915251_9915255del, NC_000019.10:g.9915252_9915255del, NC_000019.10:g.9915253_9915255del, NC_000019.10:g.9915254_9915255del, NC_000019.10:g.9915255del, NC_000019.10:g.9915255dup, NC_000019.10:g.9915254_9915255dup, NC_000019.9:g.10025926_10025931del, NC_000019.9:g.10025927_10025931del, NC_000019.9:g.10025928_10025931del, NC_000019.9:g.10025929_10025931del, NC_000019.9:g.10025930_10025931del, NC_000019.9:g.10025931del, NC_000019.9:g.10025931dup, NC_000019.9:g.10025930_10025931dup

Select item 14915006096.

rs1491500609 [Homo sapiens]

Variant type:: INS
Alleles:: ->TGGGCATG,TTA [Show Flanks]
Chromosome:: 19:9919812 (GRCh38)
19:10030489 (GRCh37)
Canonical SPDI:: NC_000019.10:9919812::TGGGCATG,NC_000019.10:9919812::TTA
Gene:: OLFM2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: TGGGCATG=0.000008/1 (GnomAD)
HGVS:: NC_000019.10:g.9919812_9919813insTGGGCATG, NC_000019.10:g.9919812_9919813insTTA, NC_000019.9:g.10030488_10030489insTGGGCATG, NC_000019.9:g.10030488_10030489insTTA

Select item 14914884257.

rs1491488425 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 19:9878382 (GRCh38)
19:9989059 (GRCh37)
Canonical SPDI:: NC_000019.10:9878382::C
Gene:: OLFM2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00059/7 (ALFA)
C=0.02575/76 (GnomAD)
HGVS:: NC_000019.10:g.9878382_9878383insC, NC_000019.9:g.9989058_9989059insC

Select item 14914570478.

rs1491457047 has merged into rs56281493 [Homo sapiens]

Variant type:: DELINS
Alleles:: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT>-,GT,GTGT,GTGTGT,GTGTGTGT,GTGTGTGTGT,GTGTGTGTGTGT,GTGTGTGTGTGTGT,GTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT [Show Flanks]
Chromosome:: 19:9904176 (GRCh38)
19:10014852 (GRCh37)
Canonical SPDI:: NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000019.10:9904152:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Gene:: OLFM2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGTGTGTGTGTGTGTGTGTGTGTGT=0./0 (ALFA)
-=0.2135/823 (ALSPAC)
HGVS:: NC_000019.10:g.9904154GT[11], NC_000019.10:g.9904154GT[12], NC_000019.10:g.9904154GT[13], NC_000019.10:g.9904154GT[14], NC_000019.10:g.9904154GT[15], NC_000019.10:g.9904154GT[16], NC_000019.10:g.9904154GT[17], NC_000019.10:g.9904154GT[18], NC_000019.10:g.9904154GT[19], NC_000019.10:g.9904154GT[20], NC_000019.10:g.9904154GT[21], NC_000019.10:g.9904154GT[22], NC_000019.10:g.9904154GT[23], NC_000019.10:g.9904154GT[24], NC_000019.10:g.9904154GT[25], NC_000019.10:g.9904154GT[27], NC_000019.10:g.9904154GT[28], NC_000019.10:g.9904154GT[29], NC_000019.10:g.9904154GT[30], NC_000019.10:g.9904154GT[31], NC_000019.10:g.9904154GT[32], NC_000019.10:g.9904154GT[33], NC_000019.10:g.9904154GT[34], NC_000019.10:g.9904154GT[35], NC_000019.9:g.10014830GT[11], NC_000019.9:g.10014830GT[12], NC_000019.9:g.10014830GT[13], NC_000019.9:g.10014830GT[14], NC_000019.9:g.10014830GT[15], NC_000019.9:g.10014830GT[16], NC_000019.9:g.10014830GT[17], NC_000019.9:g.10014830GT[18], NC_000019.9:g.10014830GT[19], NC_000019.9:g.10014830GT[20], NC_000019.9:g.10014830GT[21], NC_000019.9:g.10014830GT[22], NC_000019.9:g.10014830GT[23], NC_000019.9:g.10014830GT[24], NC_000019.9:g.10014830GT[25], NC_000019.9:g.10014830GT[27], NC_000019.9:g.10014830GT[28], NC_000019.9:g.10014830GT[29], NC_000019.9:g.10014830GT[30], NC_000019.9:g.10014830GT[31], NC_000019.9:g.10014830GT[32], NC_000019.9:g.10014830GT[33], NC_000019.9:g.10014830GT[34], NC_000019.9:g.10014830GT[35]

Select item 14914463259.

rs1491446325 has merged into rs958073118 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>-,CC [Show Flanks]
Chromosome:: 19:9913844 (GRCh38)
19:10024520 (GRCh37)
Canonical SPDI:: NC_000019.10:9913843:CCCCC:CCCC,NC_000019.10:9913843:CCCCC:CCCCCC
Gene:: OLFM2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCCCC=0./0 (ALFA)
HGVS:: NC_000019.10:g.9913848del, NC_000019.10:g.9913848dup, NC_000019.9:g.10024524del, NC_000019.9:g.10024524dup

Select item 149143495910.

rs1491434959 has merged into rs4044581 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 19:9884289 (GRCh38)
19:9994965 (GRCh37)
Canonical SPDI:: NC_000019.10:9884276:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000019.10:9884276:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000019.10:9884276:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000019.10:9884276:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000019.10:9884276:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000019.10:9884276:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000019.10:9884276:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000019.10:9884276:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000019.10:9884276:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9884276:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9884276:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: OLFM2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAA=0./0 (ALFA)
AA=0.1563/783 (1000Genomes)
HGVS:: NC_000019.10:g.9884289_9884295del, NC_000019.10:g.9884290_9884295del, NC_000019.10:g.9884291_9884295del, NC_000019.10:g.9884292_9884295del, NC_000019.10:g.9884293_9884295del, NC_000019.10:g.9884294_9884295del, NC_000019.10:g.9884295del, NC_000019.10:g.9884295dup, NC_000019.10:g.9884293_9884295dup, NC_000019.10:g.9884292_9884295dup, NC_000019.10:g.9884285_9884295dup, NC_000019.9:g.9994965_9994971del, NC_000019.9:g.9994966_9994971del, NC_000019.9:g.9994967_9994971del, NC_000019.9:g.9994968_9994971del, NC_000019.9:g.9994969_9994971del, NC_000019.9:g.9994970_9994971del, NC_000019.9:g.9994971del, NC_000019.9:g.9994971dup, NC_000019.9:g.9994969_9994971dup, NC_000019.9:g.9994968_9994971dup, NC_000019.9:g.9994961_9994971dup

Select item 149143263211.

rs1491432632 has merged into rs71188843 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATTTATTTATTT>-,ATTT,ATTTATTT,ATTTATTTATTTATTT,ATTTATTTATTTATTTATTT,ATTTATTTATTTATTTATTTATTT,ATTTATTTATTTATTTATTTATTTATTT,ATTTATTTATTTATTTATTTATTTATTTATTT [Show Flanks]
Chromosome:: 19:9859321 (GRCh38)
19:9969997 (GRCh37)
Canonical SPDI:: NC_000019.10:9859305:TTTATTTATTTATTTATTTATTTATTT:TTTATTTATTTATTT,NC_000019.10:9859305:TTTATTTATTTATTTATTTATTTATTT:TTTATTTATTTATTTATTT,NC_000019.10:9859305:TTTATTTATTTATTTATTTATTTATTT:TTTATTTATTTATTTATTTATTT,NC_000019.10:9859305:TTTATTTATTTATTTATTTATTTATTT:TTTATTTATTTATTTATTTATTTATTTATTT,NC_000019.10:9859305:TTTATTTATTTATTTATTTATTTATTT:TTTATTTATTTATTTATTTATTTATTTATTTATTT,NC_000019.10:9859305:TTTATTTATTTATTTATTTATTTATTT:TTTATTTATTTATTTATTTATTTATTTATTTATTTATTT,NC_000019.10:9859305:TTTATTTATTTATTTATTTATTTATTT:TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT,NC_000019.10:9859305:TTTATTTATTTATTTATTTATTTATTT:TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT
Gene:: OLFM2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTATTTATTTATTTATTT=0./0 (ALFA)
TTTA=0.103/72 (1000Genomes)
HGVS:: NC_000019.10:g.9859309ATTT[3], NC_000019.10:g.9859309ATTT[4], NC_000019.10:g.9859309ATTT[5], NC_000019.10:g.9859309ATTT[7], NC_000019.10:g.9859309ATTT[8], NC_000019.10:g.9859309ATTT[9], NC_000019.10:g.9859309ATTT[10], NC_000019.10:g.9859309ATTT[11], NC_000019.9:g.9969985ATTT[3], NC_000019.9:g.9969985ATTT[4], NC_000019.9:g.9969985ATTT[5], NC_000019.9:g.9969985ATTT[7], NC_000019.9:g.9969985ATTT[8], NC_000019.9:g.9969985ATTT[9], NC_000019.9:g.9969985ATTT[10], NC_000019.9:g.9969985ATTT[11]

Select item 149142277712.

rs1491422777 has merged into rs34756498 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTTT,TTTTTTTT [Show Flanks]
Chromosome:: 19:9915250 (GRCh38)
19:10025926 (GRCh37)
Canonical SPDI:: NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000019.10:9915239:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT
Gene:: OLFM2 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTT=0./0 (ALFA)
-=0.2935/172 (NorthernSweden)
-=0.4/16 (GENOME_DK)
TT=0.4986/2497 (1000Genomes)
HGVS:: NC_000019.10:g.9915250_9915255del, NC_000019.10:g.9915251_9915255del, NC_000019.10:g.9915252_9915255del, NC_000019.10:g.9915253_9915255del, NC_000019.10:g.9915254_9915255del, NC_000019.10:g.9915255del, NC_000019.10:g.9915255dup, NC_000019.10:g.9915254_9915255dup, NC_000019.9:g.10025926_10025931del, NC_000019.9:g.10025927_10025931del, NC_000019.9:g.10025928_10025931del, NC_000019.9:g.10025929_10025931del, NC_000019.9:g.10025930_10025931del, NC_000019.9:g.10025931del, NC_000019.9:g.10025931dup, NC_000019.9:g.10025930_10025931dup

Select item 149141569113.

rs1491415691 [Homo sapiens]

Variant type:: DEL
Alleles:: TG>- [Show Flanks]
Chromosome:: 19:9919812 (GRCh38)
19:10030488 (GRCh37)
Canonical SPDI:: NC_000019.10:9919811:TG:
Gene:: OLFM2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0.001349/16 (ALFA)
-=0.000154/19 (GnomAD)
HGVS:: NC_000019.10:g.9919812_9919813del, NC_000019.9:g.10030488_10030489del

Select item 149140581214.

rs1491405812 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: 19:9877831 (GRCh38)
19:9988507 (GRCh37)
Canonical SPDI:: NC_000019.10:9877830:AT:
Gene:: OLFM2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000008/1 (GnomAD)
HGVS:: NC_000019.10:g.9877831_9877832del, NC_000019.9:g.9988507_9988508del

Select item 149140263215.

rs1491402632 has merged into rs532183134 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,A,AAA [Show Flanks]
Chromosome:: 19:9901233 (GRCh38)
19:10011909 (GRCh37)
Canonical SPDI:: NC_000019.10:9901222:AAAAAAAAAAAA:AAAAAAAAAA,NC_000019.10:9901222:AAAAAAAAAAAA:AAAAAAAAAAA,NC_000019.10:9901222:AAAAAAAAAAAA:AAAAAAAAAAAAA
Gene:: OLFM2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
-=0.02336/116 (1000Genomes)
HGVS:: NC_000019.10:g.9901233_9901234del, NC_000019.10:g.9901234del, NC_000019.10:g.9901234dup, NC_000019.9:g.10011909_10011910del, NC_000019.9:g.10011910del, NC_000019.9:g.10011910dup

Select item 149140188816.

rs1491401888 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,TTT,TTTT [Show Flanks]
Chromosome:: 19:9904152 (GRCh38)
19:10014828 (GRCh37)
Canonical SPDI:: NC_000019.10:9904150:TTT:T,NC_000019.10:9904150:TTT:TTTT,NC_000019.10:9904150:TTT:TTTTT
Gene:: OLFM2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
-=0.000035/1 (TOMMO)
HGVS:: NC_000019.10:g.9904152_9904153del, NC_000019.10:g.9904153dup, NC_000019.10:g.9904152_9904153dup, NC_000019.9:g.10014828_10014829del, NC_000019.9:g.10014829dup, NC_000019.9:g.10014828_10014829dup

Select item 149136871317.

rs1491368713 has merged into rs1166738814 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 19:9924418 (GRCh38)
19:10035094 (GRCh37)
Canonical SPDI:: NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000019.10:9924406:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: OLFM2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000019.10:g.9924418_9924433del, NC_000019.10:g.9924419_9924433del, NC_000019.10:g.9924420_9924433del, NC_000019.10:g.9924421_9924433del, NC_000019.10:g.9924422_9924433del, NC_000019.10:g.9924423_9924433del, NC_000019.10:g.9924424_9924433del, NC_000019.10:g.9924425_9924433del, NC_000019.10:g.9924426_9924433del, NC_000019.10:g.9924427_9924433del, NC_000019.10:g.9924428_9924433del, NC_000019.10:g.9924429_9924433del, NC_000019.10:g.9924430_9924433del, NC_000019.10:g.9924431_9924433del, NC_000019.10:g.9924432_9924433del, NC_000019.10:g.9924433del, NC_000019.10:g.9924433dup, NC_000019.10:g.9924432_9924433dup, NC_000019.10:g.9924431_9924433dup, NC_000019.9:g.10035094_10035109del, NC_000019.9:g.10035095_10035109del, NC_000019.9:g.10035096_10035109del, NC_000019.9:g.10035097_10035109del, NC_000019.9:g.10035098_10035109del, NC_000019.9:g.10035099_10035109del, NC_000019.9:g.10035100_10035109del, NC_000019.9:g.10035101_10035109del, NC_000019.9:g.10035102_10035109del, NC_000019.9:g.10035103_10035109del, NC_000019.9:g.10035104_10035109del, NC_000019.9:g.10035105_10035109del, NC_000019.9:g.10035106_10035109del, NC_000019.9:g.10035107_10035109del, NC_000019.9:g.10035108_10035109del, NC_000019.9:g.10035109del, NC_000019.9:g.10035109dup, NC_000019.9:g.10035108_10035109dup, NC_000019.9:g.10035107_10035109dup

Select item 149136668018.

rs1491366680 has merged into rs35308457 [Homo sapiens]

Variant type:: DELINS
Alleles:: CACACACACACACA>-,CACACACA,CACACACACA,CACACACACACA,CACACACACACACACA,CACACACACACACACACA [Show Flanks]
Chromosome:: 19:9922281 (GRCh38)
19:10032957 (GRCh37)
Canonical SPDI:: NC_000019.10:9922273:ACACACACACACACACACACA:ACACACA,NC_000019.10:9922273:ACACACACACACACACACACA:ACACACACACACACA,NC_000019.10:9922273:ACACACACACACACACACACA:ACACACACACACACACA,NC_000019.10:9922273:ACACACACACACACACACACA:ACACACACACACACACACA,NC_000019.10:9922273:ACACACACACACACACACACA:ACACACACACACACACACACACA,NC_000019.10:9922273:ACACACACACACACACACACA:ACACACACACACACACACACACACA
Gene:: OLFM2 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACACACACACACACA=0./0 (ALFA)
AC=0.277022/73325 (TOPMED)
AC=0.313333/188 (NorthernSweden)
AC=0.325/13 (GENOME_DK)
AC=0.457547/97 (Vietnamese)
HGVS:: NC_000019.10:g.9922275CA[3], NC_000019.10:g.9922275CA[7], NC_000019.10:g.9922275CA[8], NC_000019.10:g.9922275CA[9], NC_000019.10:g.9922275CA[11], NC_000019.10:g.9922275CA[12], NC_000019.9:g.10032951CA[3], NC_000019.9:g.10032951CA[7], NC_000019.9:g.10032951CA[8], NC_000019.9:g.10032951CA[9], NC_000019.9:g.10032951CA[11], NC_000019.9:g.10032951CA[12]

Select item 149135070719.

rs1491350707 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->C
Chromosome:: no mapping
Canonical SPDI:

Select item 149134955920.

rs1491349559 has merged into rs34941045 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAA,AAAAAAAAAA [Show Flanks]
Chromosome:: 19:9871584 (GRCh38)
19:9982260 (GRCh37)
Canonical SPDI:: NC_000019.10:9871573:AAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000019.10:9871573:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000019.10:9871573:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000019.10:9871573:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000019.10:9871573:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000019.10:9871573:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000019.10:9871573:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000019.10:9871573:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000019.10:9871573:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA
Gene:: OLFM2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAA=0./0 (ALFA)
AA=0.4643/2325 (1000Genomes)
HGVS:: NC_000019.10:g.9871584_9871591del, NC_000019.10:g.9871586_9871591del, NC_000019.10:g.9871587_9871591del, NC_000019.10:g.9871588_9871591del, NC_000019.10:g.9871589_9871591del, NC_000019.10:g.9871590_9871591del, NC_000019.10:g.9871591del, NC_000019.10:g.9871591dup, NC_000019.10:g.9871590_9871591dup, NC_000019.9:g.9982260_9982267del, NC_000019.9:g.9982262_9982267del, NC_000019.9:g.9982263_9982267del, NC_000019.9:g.9982264_9982267del, NC_000019.9:g.9982265_9982267del, NC_000019.9:g.9982266_9982267del, NC_000019.9:g.9982267del, NC_000019.9:g.9982267dup, NC_000019.9:g.9982266_9982267dup

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