SNP Links for Gene (Select 9370) - SNP

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Select item 14913442961.

rs1491344296 has merged into rs766700468 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>-,TATA [Show Flanks]
Chromosome:: 3:186841906 (GRCh38)
3:186559695 (GRCh37)
Canonical SPDI:: NC_000003.12:186841904:ATA:A,NC_000003.12:186841904:ATA:ATATA
Gene:: ADIPOQ (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000214/3 (ALFA)
-=0.0001/14 (GnomAD)
-=0.000156/1 (1000Genomes)
-=0.000185/49 (TOPMED)
HGVS:: NC_000003.12:g.186841906_186841907del, NC_000003.12:g.186841906_186841907dup, NC_000003.11:g.186559695_186559696del, NC_000003.11:g.186559695_186559696dup, NG_021140.1:g.4233_4234del, NG_021140.1:g.4233_4234dup, NG_044949.1:g.1997_1998del, NG_044949.1:g.1997_1998dup

Select item 14911145302.

rs1491114530 has merged into rs35615373 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 3:186843671 (GRCh38)
3:186561460 (GRCh37)
Canonical SPDI:: NC_000003.12:186843660:AAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000003.12:186843660:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000003.12:186843660:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000003.12:186843660:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000003.12:186843660:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000003.12:186843660:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000003.12:186843660:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000003.12:186843660:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000003.12:186843660:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA
Gene:: ADIPOQ (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAA=0./0 (ALFA)
A=0.2973/1489 (1000Genomes)
HGVS:: NC_000003.12:g.186843671_186843676del, NC_000003.12:g.186843673_186843676del, NC_000003.12:g.186843674_186843676del, NC_000003.12:g.186843675_186843676del, NC_000003.12:g.186843676del, NC_000003.12:g.186843676dup, NC_000003.12:g.186843675_186843676dup, NC_000003.12:g.186843674_186843676dup, NC_000003.12:g.186843669_186843676dup, NC_000003.11:g.186561460_186561465del, NC_000003.11:g.186561462_186561465del, NC_000003.11:g.186561463_186561465del, NC_000003.11:g.186561464_186561465del, NC_000003.11:g.186561465del, NC_000003.11:g.186561465dup, NC_000003.11:g.186561464_186561465dup, NC_000003.11:g.186561463_186561465dup, NC_000003.11:g.186561458_186561465dup, NG_021140.1:g.5998_6003del, NG_021140.1:g.6000_6003del, NG_021140.1:g.6001_6003del, NG_021140.1:g.6002_6003del, NG_021140.1:g.6003del, NG_021140.1:g.6003dup, NG_021140.1:g.6002_6003dup, NG_021140.1:g.6001_6003dup, NG_021140.1:g.5996_6003dup, NG_044949.1:g.3762_3767del, NG_044949.1:g.3764_3767del, NG_044949.1:g.3765_3767del, NG_044949.1:g.3766_3767del, NG_044949.1:g.3767del, NG_044949.1:g.3767dup, NG_044949.1:g.3766_3767dup, NG_044949.1:g.3765_3767dup, NG_044949.1:g.3760_3767dup

Select item 14907418793.

rs1490741879 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 3:186853525 (GRCh38)
3:186571314 (GRCh37)
Canonical SPDI:: NC_000003.12:186853524:C:G,NC_000003.12:186853524:C:T
Gene:: ADIPOQ (Varview), ADIPOQ-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000023/6 (TOPMED)
G=0.000029/4 (GnomAD)
T=0.000035/1 (TOMMO)
HGVS:: NC_000003.12:g.186853525C>G, NC_000003.12:g.186853525C>T, NC_000003.11:g.186571314C>G, NC_000003.11:g.186571314C>T, NG_021140.1:g.15852C>G, NG_021140.1:g.15852C>T

Select item 14901505734.

rs1490150573 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:186857939 (GRCh38)
3:186575728 (GRCh37)
Canonical SPDI:: NC_000003.12:186857938:C:T
Gene:: ADIPOQ (Varview), ADIPOQ-AS1 (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
HGVS:: NC_000003.12:g.186857939C>T, NC_000003.11:g.186575728C>T, NG_021140.1:g.20266C>T, NM_004797.4:c.*3235C>T, NM_004797.3:c.*3235C>T, NM_001177800.2:c.*3235C>T, NM_001177800.1:c.*3235C>T

Select item 14900256195.

rs1490025619 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:186842338 (GRCh38)
3:186560127 (GRCh37)
Canonical SPDI:: NC_000003.12:186842337:C:T
Gene:: ADIPOQ (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.186842338C>T, NC_000003.11:g.186560127C>T, NG_021140.1:g.4665C>T, NG_044949.1:g.2429C>T

Select item 14899718296.

rs1489971829 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 3:186849050 (GRCh38)
3:186566839 (GRCh37)
Canonical SPDI:: NC_000003.12:186849049:G:A,NC_000003.12:186849049:G:T
Gene:: ADIPOQ (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000003.12:g.186849050G>A, NC_000003.12:g.186849050G>T, NC_000003.11:g.186566839G>A, NC_000003.11:g.186566839G>T, NG_021140.1:g.11377G>A, NG_021140.1:g.11377G>T, NG_044949.1:g.9141G>A, NG_044949.1:g.9141G>T

Select item 14898503567.

rs1489850356 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 3:186846917 (GRCh38)
3:186564706 (GRCh37)
Canonical SPDI:: NC_000003.12:186846916:A:T
Gene:: ADIPOQ (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.186846917A>T, NC_000003.11:g.186564706A>T, NG_021140.1:g.9244A>T, NG_044949.1:g.7008A>T

Select item 14897577088.

rs1489757708 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:186850074 (GRCh38)
3:186567863 (GRCh37)
Canonical SPDI:: NC_000003.12:186850073:G:A
Gene:: ADIPOQ (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.186850074G>A, NC_000003.11:g.186567863G>A, NG_021140.1:g.12401G>A, NG_044949.1:g.10165G>A

Select item 14896833099.

rs1489683309 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:186848860 (GRCh38)
3:186566649 (GRCh37)
Canonical SPDI:: NC_000003.12:186848859:A:G
Gene:: ADIPOQ (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.186848860A>G, NC_000003.11:g.186566649A>G, NG_021140.1:g.11187A>G, NG_044949.1:g.8951A>G

Select item 148962936510.

rs1489629365 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:186849047 (GRCh38)
3:186566836 (GRCh37)
Canonical SPDI:: NC_000003.12:186849046:A:G
Gene:: ADIPOQ (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.186849047A>G, NC_000003.11:g.186566836A>G, NG_021140.1:g.11374A>G, NG_044949.1:g.9138A>G

Select item 148958159211.

rs1489581592 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:186845616 (GRCh38)
3:186563405 (GRCh37)
Canonical SPDI:: NC_000003.12:186845615:C:T
Gene:: ADIPOQ (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.00015/21 (GnomAD)
T=0.001667/1 (NorthernSweden)
HGVS:: NC_000003.12:g.186845616C>T, NC_000003.11:g.186563405C>T, NG_021140.1:g.7943C>T, NG_044949.1:g.5707C>T

Select item 148956931712.

rs1489569317 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:186857365 (GRCh38)
3:186575154 (GRCh37)
Canonical SPDI:: NC_000003.12:186857364:A:G
Gene:: ADIPOQ (Varview), ADIPOQ-AS1 (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
HGVS:: NC_000003.12:g.186857365A>G, NC_000003.11:g.186575154A>G, NG_021140.1:g.19692A>G, NM_004797.4:c.*2661A>G, NM_004797.3:c.*2661A>G, NM_001177800.2:c.*2661A>G, NM_001177800.1:c.*2661A>G

Select item 148951646013.

rs1489516460 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:186858326 (GRCh38)
3:186576115 (GRCh37)
Canonical SPDI:: NC_000003.12:186858325:A:G
Gene:: ADIPOQ (Varview), ADIPOQ-AS1 (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000142/2 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000019/5 (TOPMED)
HGVS:: NC_000003.12:g.186858326A>G, NC_000003.11:g.186576115A>G, NG_021140.1:g.20653A>G, NM_004797.4:c.*3622A>G, NM_004797.3:c.*3622A>G, NM_001177800.2:c.*3622A>G, NM_001177800.1:c.*3622A>G

Select item 148944387414.

rs1489443874 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 3:186848802 (GRCh38)
3:186566591 (GRCh37)
Canonical SPDI:: NC_000003.12:186848801:A:C
Gene:: ADIPOQ (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.186848802A>C, NC_000003.11:g.186566591A>C, NG_021140.1:g.11129A>C, NG_044949.1:g.8893A>C

Select item 148939060815.

rs1489390608 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 3:186846524 (GRCh38)
3:186564313 (GRCh37)
Canonical SPDI:: NC_000003.12:186846523:G:A,NC_000003.12:186846523:G:T
Gene:: ADIPOQ (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.00004/1 (TOMMO)
HGVS:: NC_000003.12:g.186846524G>A, NC_000003.12:g.186846524G>T, NC_000003.11:g.186564313G>A, NC_000003.11:g.186564313G>T, NG_021140.1:g.8851G>A, NG_021140.1:g.8851G>T, NG_044949.1:g.6615G>A, NG_044949.1:g.6615G>T

Select item 148937889116.

rs1489378891 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 3:186841708 (GRCh38)
3:186559497 (GRCh37)
Canonical SPDI:: NC_000003.12:186841707:T:G
Gene:: ADIPOQ (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.186841708T>G, NC_000003.11:g.186559497T>G, NG_021140.1:g.4035T>G, NG_044949.1:g.1799T>G

Select item 148916801017.

rs1489168010 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,T [Show Flanks]
Chromosome:: 3:186849595 (GRCh38)
3:186567384 (GRCh37)
Canonical SPDI:: NC_000003.12:186849594:A:C,NC_000003.12:186849594:A:T
Gene:: ADIPOQ (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
C=0.000071/1 (TOMMO)
HGVS:: NC_000003.12:g.186849595A>C, NC_000003.12:g.186849595A>T, NC_000003.11:g.186567384A>C, NC_000003.11:g.186567384A>T, NG_021140.1:g.11922A>C, NG_021140.1:g.11922A>T, NG_044949.1:g.9686A>C, NG_044949.1:g.9686A>T

Select item 148887870318.

rs1488878703 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 3:186855358 (GRCh38)
3:186573147 (GRCh37)
Canonical SPDI:: NC_000003.12:186855357:C:A
Gene:: ADIPOQ (Varview), ADIPOQ-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.186855358C>A, NC_000003.11:g.186573147C>A, NG_021140.1:g.17685C>A, NM_004797.4:c.*654C>A, NM_004797.3:c.*654C>A, NM_001177800.2:c.*654C>A, NM_001177800.1:c.*654C>A, NR_046662.2:n.895G>T, NR_046662.1:n.766G>T

Select item 148859109819.

rs1488591098 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:186857883 (GRCh38)
3:186575672 (GRCh37)
Canonical SPDI:: NC_000003.12:186857882:C:T
Gene:: ADIPOQ (Varview), ADIPOQ-AS1 (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000003.12:g.186857883C>T, NC_000003.11:g.186575672C>T, NG_021140.1:g.20210C>T, NM_004797.4:c.*3179C>T, NM_004797.3:c.*3179C>T, NM_001177800.2:c.*3179C>T, NM_001177800.1:c.*3179C>T

Select item 148853873820.

rs1488538738 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:186858851 (GRCh38)
3:186576640 (GRCh37)
Canonical SPDI:: NC_000003.12:186858850:A:G
Gene:: ADIPOQ (Varview), ADIPOQ-AS1 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000003.12:g.186858851A>G, NC_000003.11:g.186576640A>G, NG_021140.1:g.21178A>G

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