SNP Links for Gene (Select 9528) - SNP

Links from Gene

Items: 1 to 20 of 1000

<< First< Prev

Page of 50

Next >Last >>

Select item 14914873751.

rs1491487375 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 1:54042056 (GRCh38)
1:54507730 (GRCh37)
Canonical SPDI:: NC_000001.11:54042056::C
Gene:: TMEM59 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.54042056_54042057insC, NC_000001.10:g.54507729_54507730insC

Select item 14914768892.

rs1491476889 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GAAAAAA [Show Flanks]
Chromosome:: 1:54044342 (GRCh38)
1:54510016 (GRCh37)
Canonical SPDI:: NC_000001.11:54044342:AAAAAA:AAAAAAGAAAAAA
Gene:: TMEM59 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAGAAAAAA=0./0 (ALFA)
AAAAAAG=0.0001/7 (GnomAD)
HGVS:: NC_000001.11:g.54044343_54044348A[6]GAAAAAA[1], NC_000001.10:g.54510016_54510021A[6]GAAAAAA[1]

Select item 14913086473.

rs1491308647 has merged into rs71063899 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 1:54044352 (GRCh38)
1:54510025 (GRCh37)
Canonical SPDI:: NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54044341:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: TMEM59 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000001.11:g.54044352_54044360del, NC_000001.11:g.54044353_54044360del, NC_000001.11:g.54044354_54044360del, NC_000001.11:g.54044355_54044360del, NC_000001.11:g.54044356_54044360del, NC_000001.11:g.54044357_54044360del, NC_000001.11:g.54044358_54044360del, NC_000001.11:g.54044359_54044360del, NC_000001.11:g.54044360del, NC_000001.11:g.54044360dup, NC_000001.11:g.54044359_54044360dup, NC_000001.11:g.54044358_54044360dup, NC_000001.11:g.54044357_54044360dup, NC_000001.11:g.54044356_54044360dup, NC_000001.11:g.54044355_54044360dup, NC_000001.11:g.54044354_54044360dup, NC_000001.11:g.54044353_54044360dup, NC_000001.11:g.54044352_54044360dup, NC_000001.11:g.54044351_54044360dup, NC_000001.11:g.54044350_54044360dup, NC_000001.11:g.54044349_54044360dup, NC_000001.11:g.54044346_54044360dup, NC_000001.10:g.54510025_54510033del, NC_000001.10:g.54510026_54510033del, NC_000001.10:g.54510027_54510033del, NC_000001.10:g.54510028_54510033del, NC_000001.10:g.54510029_54510033del, NC_000001.10:g.54510030_54510033del, NC_000001.10:g.54510031_54510033del, NC_000001.10:g.54510032_54510033del, NC_000001.10:g.54510033del, NC_000001.10:g.54510033dup, NC_000001.10:g.54510032_54510033dup, NC_000001.10:g.54510031_54510033dup, NC_000001.10:g.54510030_54510033dup, NC_000001.10:g.54510029_54510033dup, NC_000001.10:g.54510028_54510033dup, NC_000001.10:g.54510027_54510033dup, NC_000001.10:g.54510026_54510033dup, NC_000001.10:g.54510025_54510033dup, NC_000001.10:g.54510024_54510033dup, NC_000001.10:g.54510023_54510033dup, NC_000001.10:g.54510022_54510033dup, NC_000001.10:g.54510019_54510033dup

Select item 14908445764.

rs1490844576 has merged into rs76749666 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAA>-,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 1:54034127 (GRCh38)
1:54499800 (GRCh37)
Canonical SPDI:: NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:54034118:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: TMEM59 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAA=0./0 (ALFA)
-=0.000008/2 (TOPMED)
-=0.33147/1660 (1000Genomes)
HGVS:: NC_000001.11:g.54034127_54034140del, NC_000001.11:g.54034131_54034140del, NC_000001.11:g.54034132_54034140del, NC_000001.11:g.54034133_54034140del, NC_000001.11:g.54034134_54034140del, NC_000001.11:g.54034135_54034140del, NC_000001.11:g.54034136_54034140del, NC_000001.11:g.54034137_54034140del, NC_000001.11:g.54034138_54034140del, NC_000001.11:g.54034139_54034140del, NC_000001.11:g.54034140del, NC_000001.11:g.54034140dup, NC_000001.11:g.54034139_54034140dup, NC_000001.11:g.54034138_54034140dup, NC_000001.11:g.54034137_54034140dup, NC_000001.11:g.54034136_54034140dup, NC_000001.11:g.54034135_54034140dup, NC_000001.11:g.54034133_54034140dup, NC_000001.10:g.54499800_54499813del, NC_000001.10:g.54499804_54499813del, NC_000001.10:g.54499805_54499813del, NC_000001.10:g.54499806_54499813del, NC_000001.10:g.54499807_54499813del, NC_000001.10:g.54499808_54499813del, NC_000001.10:g.54499809_54499813del, NC_000001.10:g.54499810_54499813del, NC_000001.10:g.54499811_54499813del, NC_000001.10:g.54499812_54499813del, NC_000001.10:g.54499813del, NC_000001.10:g.54499813dup, NC_000001.10:g.54499812_54499813dup, NC_000001.10:g.54499811_54499813dup, NC_000001.10:g.54499810_54499813dup, NC_000001.10:g.54499809_54499813dup, NC_000001.10:g.54499808_54499813dup, NC_000001.10:g.54499806_54499813dup

Select item 14907718595.

rs1490771859 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:54042271 (GRCh38)
1:54507944 (GRCh37)
Canonical SPDI:: NC_000001.11:54042270:T:G
Gene:: TMEM59 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000023/6 (TOPMED)
HGVS:: NC_000001.11:g.54042271T>G, NC_000001.10:g.54507944T>G

Select item 14907000516.

rs1490700051 [Homo sapiens]

Variant type:: INS
Alleles:: ->CGGCAAGCTCCCA [Show Flanks]
Chromosome:: 1:54052711 (GRCh38)
1:54518385 (GRCh37)
Canonical SPDI:: NC_000001.11:54052711::CGGCAAGCTCCCA
Gene:: TMEM59 (Varview), TCEANC2 (Varview), MIR4781 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CGGCAAGCTCCCA=0.000447/2 (ALFA)
CGGCAAGCTCCCA=0.000007/1 (GnomAD)
CGGCAAGCTCCCA=0.000446/2 (Estonian)
HGVS:: NC_000001.11:g.54052711_54052712insCGGCAAGCTCCCA, NC_000001.10:g.54518384_54518385insCGGCAAGCTCCCA

Select item 14905567627.

rs1490556762 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:54034686 (GRCh38)
1:54500359 (GRCh37)
Canonical SPDI:: NC_000001.11:54034685:A:G
Gene:: TMEM59 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
HGVS:: NC_000001.11:g.54034686A>G, NC_000001.10:g.54500359A>G

Select item 14903083598.

rs1490308359 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:54026300 (GRCh38)
1:54491973 (GRCh37)
Canonical SPDI:: NC_000001.11:54026299:A:T
Gene:: TMEM59 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.54026300A>T, NC_000001.10:g.54491973A>T

Select item 14902749889.

rs1490274988 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:54042911 (GRCh38)
1:54508584 (GRCh37)
Canonical SPDI:: NC_000001.11:54042910:G:A
Gene:: TMEM59 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.54042911G>A, NC_000001.10:g.54508584G>A

Select item 149007606810.

rs1490076068 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:54044125 (GRCh38)
1:54509798 (GRCh37)
Canonical SPDI:: NC_000001.11:54044124:G:A,NC_000001.11:54044124:G:C
Gene:: TMEM59 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
A=0.000035/1 (TOMMO)
HGVS:: NC_000001.11:g.54044125G>A, NC_000001.11:g.54044125G>C, NC_000001.10:g.54509798G>A, NC_000001.10:g.54509798G>C

Select item 148997184511.

rs1489971845 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:54052789 (GRCh38)
1:54518462 (GRCh37)
Canonical SPDI:: NC_000001.11:54052788:C:A
Gene:: TMEM59 (Varview), TCEANC2 (Varview), MIR4781 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.54052789C>A, NC_000001.10:g.54518462C>A

Select item 148991274212.

rs1489912742 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:54034081 (GRCh38)
1:54499754 (GRCh37)
Canonical SPDI:: NC_000001.11:54034080:T:C
Gene:: TMEM59 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000008/1 (GnomAD)
C=0.000546/1 (Korea1K)
HGVS:: NC_000001.11:g.54034081T>C, NC_000001.10:g.54499754T>C

Select item 148988447513.

rs1489884475 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:54053604 (GRCh38)
1:54519277 (GRCh37)
Canonical SPDI:: NC_000001.11:54053603:G:A
Gene:: TMEM59 (Varview), TCEANC2 (Varview), MIR4781 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000019/5 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.54053604G>A, NC_000001.10:g.54519277G>A, NG_060598.1:g.469G>A, NM_153035.2:c.-197G>A, NR_130900.1:n.33G>A, NM_153035.1:c.-197G>A

Select item 148986705914.

rs1489867059 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:54035142 (GRCh38)
1:54500815 (GRCh37)
Canonical SPDI:: NC_000001.11:54035141:T:C
Gene:: TMEM59 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000019/5 (TOPMED)
HGVS:: NC_000001.11:g.54035142T>C, NC_000001.10:g.54500815T>C

Select item 148981773615.

rs1489817736 [Homo sapiens]

Variant type:: DEL
Alleles:: AA>- [Show Flanks]
Chromosome:: 1:54026857 (GRCh38)
1:54492530 (GRCh37)
Canonical SPDI:: NC_000001.11:54026856:AA:
Gene:: TMEM59 (Varview)
Functional Consequence:: 3_prime_UTR_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.54026857_54026858del, NC_000001.10:g.54492530_54492531del, NM_004872.5:c.*5292_*5293del, NM_004872.4:c.*5292_*5293del, NM_001305043.2:c.*5292_*5293del, NM_001305043.1:c.*5292_*5293del, NM_001305050.2:c.*5292_*5293del, NM_001305050.1:c.*5292_*5293del, NM_001305049.1:c.*5292_*5293del, NM_001305051.1:c.*5292_*5293del, NM_001305052.1:c.*5292_*5293del

Select item 148980747316.

rs1489807473 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:54033418 (GRCh38)
1:54499091 (GRCh37)
Canonical SPDI:: NC_000001.11:54033417:T:C
Gene:: TMEM59 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000029/4 (GnomAD)
C=0.000071/2 (TOMMO)
HGVS:: NC_000001.11:g.54033418T>C, NC_000001.10:g.54499091T>C

Select item 148937385217.

rs1489373852 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 1:54044394 (GRCh38)
1:54510067 (GRCh37)
Canonical SPDI:: NC_000001.11:54044393:T:A,NC_000001.11:54044393:T:G
Gene:: TMEM59 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
A=0.000029/4 (GnomAD)
HGVS:: NC_000001.11:g.54044394T>A, NC_000001.11:g.54044394T>G, NC_000001.10:g.54510067T>A, NC_000001.10:g.54510067T>G

Select item 148935717018.

rs1489357170 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:54048211 (GRCh38)
1:54513884 (GRCh37)
Canonical SPDI:: NC_000001.11:54048210:C:T
Gene:: TMEM59 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.54048211C>T, NC_000001.10:g.54513884C>T

Select item 148926932319.

rs1489269323 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:54052269 (GRCh38)
1:54517942 (GRCh37)
Canonical SPDI:: NC_000001.11:54052268:A:G
Gene:: TMEM59 (Varview), TCEANC2 (Varview), MIR4781 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.54052269A>G, NC_000001.10:g.54517942A>G

Select item 148922512420.

rs1489225124 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:54036852 (GRCh38)
1:54502525 (GRCh37)
Canonical SPDI:: NC_000001.11:54036851:A:G
Gene:: TMEM59 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.54036852A>G, NC_000001.10:g.54502525A>G

<< First< Prev

Page of 50

Next >Last >>

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 1000

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity