SNP Links for Gene (Select 9982) - SNP

Links from Gene

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Select item 14909837781.

rs1490983778 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 4:15940736 (GRCh38)
4:15942359 (GRCh37)
Canonical SPDI:: NC_000004.12:15940735:A:C
Gene:: FGFBP1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.15940736A>C, NC_000004.11:g.15942359A>C

Select item 14909618512.

rs1490961851 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:15938301 (GRCh38)
4:15939924 (GRCh37)
Canonical SPDI:: NC_000004.12:15938300:T:C
Gene:: FGFBP1 (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000021/3 (GnomAD)
C=0.000023/6 (TOPMED)
C=0.000156/1 (1000Genomes)
HGVS:: NC_000004.12:g.15938301T>C, NC_000004.11:g.15939924T>C, NM_005130.5:c.-71A>G, NM_005130.4:c.-71A>G

Select item 14904357453.

rs1490435745 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:15936865 (GRCh38)
4:15938488 (GRCh37)
Canonical SPDI:: NC_000004.12:15936864:G:A
Gene:: FGFBP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.15936865G>A, NC_000004.11:g.15938488G>A

Select item 14901449714.

rs1490144971 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 4:15938643 (GRCh38)
4:15940266 (GRCh37)
Canonical SPDI:: NC_000004.12:15938642:A:G,NC_000004.12:15938642:A:T
Gene:: FGFBP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.15938643A>G, NC_000004.12:g.15938643A>T, NC_000004.11:g.15940266A>G, NC_000004.11:g.15940266A>T

Select item 14895411345.

rs1489541134 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:15940232 (GRCh38)
4:15941855 (GRCh37)
Canonical SPDI:: NC_000004.12:15940231:T:C
Gene:: FGFBP1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.15940232T>C, NC_000004.11:g.15941855T>C

Select item 14887214926.

rs1488721492 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:15937820 (GRCh38)
4:15939443 (GRCh37)
Canonical SPDI:: NC_000004.12:15937819:T:C
Gene:: FGFBP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000004.12:g.15937820T>C, NC_000004.11:g.15939443T>C

Select item 14882054367.

rs1488205436 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:15940119 (GRCh38)
4:15941742 (GRCh37)
Canonical SPDI:: NC_000004.12:15940118:C:T
Gene:: FGFBP1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.15940119C>T, NC_000004.11:g.15941742C>T

Select item 14875754948.

rs1487575494 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:15936854 (GRCh38)
4:15938477 (GRCh37)
Canonical SPDI:: NC_000004.12:15936853:C:T
Gene:: FGFBP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.15936854C>T, NC_000004.11:g.15938477C>T

Select item 14871235639.

rs1487123563 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTCA>- [Show Flanks]
Chromosome:: 4:15940528 (GRCh38)
4:15942151 (GRCh37)
Canonical SPDI:: NC_000004.12:15940525:CACTCA:CA
Gene:: FGFBP1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CA=0./0 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000036/1 (TOMMO)
HGVS:: NC_000004.12:g.15940528_15940531del, NC_000004.11:g.15942151_15942154del

Select item 148683779510.

rs1486837795 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:15936103 (GRCh38)
4:15937726 (GRCh37)
Canonical SPDI:: NC_000004.12:15936102:T:C
Gene:: FGFBP1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.15936103T>C, NC_000004.11:g.15937726T>C, NM_005130.5:c.530A>G, NM_005130.4:c.530A>G, NP_005121.1:p.Lys177Arg

Select item 148656526211.

rs1486565262 [Homo sapiens]

Variant type:: DELINS
Alleles:: CACA>-,CA [Show Flanks]
Chromosome:: 4:15940518 (GRCh38)
4:15942141 (GRCh37)
Canonical SPDI:: NC_000004.12:15940512:ACACACACA:ACACA,NC_000004.12:15940512:ACACACACA:ACACACA
Gene:: FGFBP1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACACACA=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.15940514CA[2], NC_000004.12:g.15940514CA[3], NC_000004.11:g.15942137CA[2], NC_000004.11:g.15942137CA[3]

Select item 148639504712.

rs1486395047 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 4:15936665 (GRCh38)
4:15938288 (GRCh37)
Canonical SPDI:: NC_000004.12:15936664:A:C
Gene:: FGFBP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.15936665A>C, NC_000004.11:g.15938288A>C

Select item 148592925013.

rs1485929250 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:15936478 (GRCh38)
4:15938101 (GRCh37)
Canonical SPDI:: NC_000004.12:15936477:C:T
Gene:: FGFBP1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.15936478C>T, NC_000004.11:g.15938101C>T, NM_005130.5:c.155G>A, NM_005130.4:c.155G>A, NP_005121.1:p.Ser52Asn

Select item 148587913514.

rs1485879135 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:15940520 (GRCh38)
4:15942143 (GRCh37)
Canonical SPDI:: NC_000004.12:15940519:C:T
Gene:: FGFBP1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000004.12:g.15940520C>T, NC_000004.11:g.15942143C>T

Select item 148581107215.

rs1485811072 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:15938122 (GRCh38)
4:15939745 (GRCh37)
Canonical SPDI:: NC_000004.12:15938121:A:G
Gene:: FGFBP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.15938122A>G, NC_000004.11:g.15939745A>G

Select item 148572046716.

rs1485720467 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:15938999 (GRCh38)
4:15940622 (GRCh37)
Canonical SPDI:: NC_000004.12:15938998:G:A
Gene:: FGFBP1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000021/3 (GnomAD)
A=0.000312/2 (1000Genomes)
HGVS:: NC_000004.12:g.15938999G>A, NC_000004.11:g.15940622G>A

Select item 148564313517.

rs1485643135 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:15935720 (GRCh38)
4:15937343 (GRCh37)
Canonical SPDI:: NC_000004.12:15935719:C:T
Gene:: FGFBP1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000019/5 (TOPMED)
HGVS:: NC_000004.12:g.15935720C>T, NC_000004.11:g.15937343C>T, NM_005130.5:c.*208G>A, NM_005130.4:c.*208G>A

Select item 148545030518.

rs1485450305 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:15935299 (GRCh38)
4:15936922 (GRCh37)
Canonical SPDI:: NC_000004.12:15935298:G:A
Gene:: FGFBP1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.15935299G>A, NC_000004.11:g.15936922G>A

Select item 148401028719.

rs1484010287 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:15936131 (GRCh38)
4:15937754 (GRCh37)
Canonical SPDI:: NC_000004.12:15936130:T:C
Gene:: FGFBP1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.000035/1 (TOMMO)
HGVS:: NC_000004.12:g.15936131T>C, NC_000004.11:g.15937754T>C, NM_005130.5:c.502A>G, NM_005130.4:c.502A>G, NP_005121.1:p.Met168Val

Select item 148398521920.

rs1483985219 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:15938026 (GRCh38)
4:15939649 (GRCh37)
Canonical SPDI:: NC_000004.12:15938025:T:C
Gene:: FGFBP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.15938026T>C, NC_000004.11:g.15939649T>C

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